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The map label for this gene is lytB [H]

Identifier: 170078246

GI number: 170078246

Start: 1715223

End: 1716815

Strand: Reverse

Name: lytB [H]

Synonym: SYNPCC7002_A1638

Alternate gene names: 170078246

Gene position: 1716815-1715223 (Counterclockwise)

Preceding gene: 170078247

Following gene: 170078244

Centisome position: 57.07

GC content: 54.36

Gene sequence:

>1593_bases
ATGGTGCGCAGTGCTAAATTTCAGGGGCAGTGGCTCGGATTGGGGCTATGGATCGGACTTGGACTATGGGGGCCGGGGGC
TTTGCCCGGTAATGCCGTTGAGATCGAAGTGGGCATTGTCCAACGATTCGGAGAAGAGCAAAACGATACTTTGACCATCT
CCAGTCTGTCGGGCGATCGCCTTGAGGTGGACATTATCAGCGGCGGCCAACAACAGACGCTCCAGACCAATCAAGTCACC
CTAGAGGTCGCCCAGCAACCCTTGCCCCAGGCGGAATTAGCGGAATATATCGTCCTCAGTGACCAGGGTACCTTTGAGAC
GGCAGAGGACAGCGCCAAATTTTGGCGTTCCCTCGGCATTGAAGTAGAAATTACCCAACCCGGTCGCTGGCAAGTGTGGG
CGAAACGGGATGTCTACCAAACGCCTCTCCTCCGGCGGTTGTTGCTCCAGGAATTAAAAGCGAAGGGTTACACCACCCCT
TATCTCAGTTCGACGGTGCGTACCGAAAAGGCGATCGCCTCCTTTGTGGTGGGGGGGTACCGGTACAATCGGGCCAATGT
GGCGATCCGTTCGCGCAACGGTTTGTTTAATGTCCAAGAAGATGGCGGCCCAGAAAGTCGCTTTGCCGGGGAACTGAGGC
TCCAGCCCAACGCCTACGGTACTTTTACCCTCGTTAATGACGTCGATATTGAGGTGTATTTACGGGGTGTTGTGCCCCAC
GAAATTGGCCCCAATGCCCCTGATAATGCCGTCGAAGCCCAGACAATCATTGCCCGCACCTACGCCCTGCGCAATTTACG
GCGTTTTGAAGCTGACGATTACGAACTTTGTGCCACGATCCATTGCCAAGTTTATAAAGGTCTCCAGGGCACTAGTCCCC
GCATTGACCAGGCGATCGCCCGCACTAAAGGTTTAGTGCTCACCTACAACAACGAATTAGTCGATGCCCTGTATTCCTCT
ACCACTGGCGGCGTAACCGCTTCCTTTAGCGATGTGTGGGATGGGGCAGAGCGGCCTTATCTCAAAGCCGTGATTGATTC
TCCAAATCCAGTCTGGGATCTAAAAGGCAACTCCCTCGCTGATGAACAGGCTTTTCGGAAATTTATCGCTCTCAACCAAG
GCTTTAACGAAACGGGGCGGACTGTCTTTCGCTGGGAAAGATCCGCCACTCTCCAGGAATTAGCCACAACCCTGCAAACC
TACCTAGAGCGCACCCAAAATCCCCTCGCGGGCATTCAAACGGTACAAAAATTAGAGATTAAGCGGCGATCGCCTTCGGG
TCGTGTCCTGGAGTTGGATGTCACCACCGACCGGGGCATTGTCAAACTCCTGAAAAATGAAATTCGCAGTGCCCTGGGGC
CGCCCCGCAGTACCCTGTTTTACCTACAACCCAACCTCAATCCCCAAAATCAACTCACGGGCTATACCTTTGTGGGCGGT
GGGTTCGGCCATGGGGTCGGCATGAGTCAATATGGCTCCTACAATCTCGCTAACTTGGGCTGGTCAGCGGCGCGGATTCT
CCAGTTTTACTATCCTGGCACCACCCTCCAACCCTTGGATGAGTCCATTGTCTTTTGGCGGGAAACCCCCTAG

Upstream 100 bases:

>100_bases
AAATTTTACTAGACGAAAATGGTAAGGTGGTGGCGTAACTTTGGGCTGGCGATCGCCGTCTATATTTTCATCAATTGTTT
TAGGTGTCAGGGGACTCGCC

Downstream 100 bases:

>100_bases
AGATAGGTGGCAACGGCGCGTAAAGAGTCAGGGATGGCGATCGCCTCAGGAAATTCTAAAGTCGTCTCCGAACTGCCGAG
GTACCCGGAGGTGGTAAAGG

Product: SpoIID-like protein

Products: NA

Alternate protein names: Cell wall-associated polypeptide CWBP76; CWBP76; Modifier protein of major autolysin [H]

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MVRSAKFQGQWLGLGLWIGLGLWGPGALPGNAVEIEVGIVQRFGEEQNDTLTISSLSGDRLEVDIISGGQQQTLQTNQVT
LEVAQQPLPQAELAEYIVLSDQGTFETAEDSAKFWRSLGIEVEITQPGRWQVWAKRDVYQTPLLRRLLLQELKAKGYTTP
YLSSTVRTEKAIASFVVGGYRYNRANVAIRSRNGLFNVQEDGGPESRFAGELRLQPNAYGTFTLVNDVDIEVYLRGVVPH
EIGPNAPDNAVEAQTIIARTYALRNLRRFEADDYELCATIHCQVYKGLQGTSPRIDQAIARTKGLVLTYNNELVDALYSS
TTGGVTASFSDVWDGAERPYLKAVIDSPNPVWDLKGNSLADEQAFRKFIALNQGFNETGRTVFRWERSATLQELATTLQT
YLERTQNPLAGIQTVQKLEIKRRSPSGRVLELDVTTDRGIVKLLKNEIRSALGPPRSTLFYLQPNLNPQNQLTGYTFVGG
GFGHGVGMSQYGSYNLANLGWSAARILQFYYPGTTLQPLDESIVFWRETP

Sequences:

>Translated_530_residues
MVRSAKFQGQWLGLGLWIGLGLWGPGALPGNAVEIEVGIVQRFGEEQNDTLTISSLSGDRLEVDIISGGQQQTLQTNQVT
LEVAQQPLPQAELAEYIVLSDQGTFETAEDSAKFWRSLGIEVEITQPGRWQVWAKRDVYQTPLLRRLLLQELKAKGYTTP
YLSSTVRTEKAIASFVVGGYRYNRANVAIRSRNGLFNVQEDGGPESRFAGELRLQPNAYGTFTLVNDVDIEVYLRGVVPH
EIGPNAPDNAVEAQTIIARTYALRNLRRFEADDYELCATIHCQVYKGLQGTSPRIDQAIARTKGLVLTYNNELVDALYSS
TTGGVTASFSDVWDGAERPYLKAVIDSPNPVWDLKGNSLADEQAFRKFIALNQGFNETGRTVFRWERSATLQELATTLQT
YLERTQNPLAGIQTVQKLEIKRRSPSGRVLELDVTTDRGIVKLLKNEIRSALGPPRSTLFYLQPNLNPQNQLTGYTFVGG
GFGHGVGMSQYGSYNLANLGWSAARILQFYYPGTTLQPLDESIVFWRETP
>Mature_530_residues
MVRSAKFQGQWLGLGLWIGLGLWGPGALPGNAVEIEVGIVQRFGEEQNDTLTISSLSGDRLEVDIISGGQQQTLQTNQVT
LEVAQQPLPQAELAEYIVLSDQGTFETAEDSAKFWRSLGIEVEITQPGRWQVWAKRDVYQTPLLRRLLLQELKAKGYTTP
YLSSTVRTEKAIASFVVGGYRYNRANVAIRSRNGLFNVQEDGGPESRFAGELRLQPNAYGTFTLVNDVDIEVYLRGVVPH
EIGPNAPDNAVEAQTIIARTYALRNLRRFEADDYELCATIHCQVYKGLQGTSPRIDQAIARTKGLVLTYNNELVDALYSS
TTGGVTASFSDVWDGAERPYLKAVIDSPNPVWDLKGNSLADEQAFRKFIALNQGFNETGRTVFRWERSATLQELATTLQT
YLERTQNPLAGIQTVQKLEIKRRSPSGRVLELDVTTDRGIVKLLKNEIRSALGPPRSTLFYLQPNLNPQNQLTGYTFVGG
GFGHGVGMSQYGSYNLANLGWSAARILQFYYPGTTLQPLDESIVFWRETP

Specific function: Possibly involved in cell wall metabolism during spore formation. Enhances the amidase activity approximately threefold [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Secreted, cell wall. Note=Cell wall localization shown in PubMed:11987133 [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007253
- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF04122 CW_binding_2; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 58954; Mature: 58954

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRSAKFQGQWLGLGLWIGLGLWGPGALPGNAVEIEVGIVQRFGEEQNDTLTISSLSGDR
CCCCCCCCCEEEEEEEEEHHCCCCCCCCCCCEEEEEEEHHHHCCCCCCCEEEEEECCCCE
LEVDIISGGQQQTLQTNQVTLEVAQQPLPQAELAEYIVLSDQGTFETAEDSAKFWRSLGI
EEEEEECCCCCCEEECCCEEEEEHHCCCCHHHHCCEEEEECCCCCCCCHHHHHHHHHCCC
EVEITQPGRWQVWAKRDVYQTPLLRRLLLQELKAKGYTTPYLSSTVRTEKAIASFVVGGY
EEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCE
RYNRANVAIRSRNGLFNVQEDGGPESRFAGELRLQPNAYGTFTLVNDVDIEVYLRGVVPH
EECCEEEEEEECCCEEEECCCCCCCHHCCCEEEECCCCCEEEEEEECCEEEEEEEECCCC
EIGPNAPDNAVEAQTIIARTYALRNLRRFEADDYELCATIHCQVYKGLQGTSPRIDQAIA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHH
RTKGLVLTYNNELVDALYSSTTGGVTASFSDVWDGAERPYLKAVIDSPNPVWDLKGNSLA
HHCCEEEEECCHHHHHHHHCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCEEECCCCCCH
DEQAFRKFIALNQGFNETGRTVFRWERSATLQELATTLQTYLERTQNPLAGIQTVQKLEI
HHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KRRSPSGRVLELDVTTDRGIVKLLKNEIRSALGPPRSTLFYLQPNLNPQNQLTGYTFVGG
HCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECC
GFGHGVGMSQYGSYNLANLGWSAARILQFYYPGTTLQPLDESIVFWRETP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MVRSAKFQGQWLGLGLWIGLGLWGPGALPGNAVEIEVGIVQRFGEEQNDTLTISSLSGDR
CCCCCCCCCEEEEEEEEEHHCCCCCCCCCCCEEEEEEEHHHHCCCCCCCEEEEEECCCCE
LEVDIISGGQQQTLQTNQVTLEVAQQPLPQAELAEYIVLSDQGTFETAEDSAKFWRSLGI
EEEEEECCCCCCEEECCCEEEEEHHCCCCHHHHCCEEEEECCCCCCCCHHHHHHHHHCCC
EVEITQPGRWQVWAKRDVYQTPLLRRLLLQELKAKGYTTPYLSSTVRTEKAIASFVVGGY
EEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCE
RYNRANVAIRSRNGLFNVQEDGGPESRFAGELRLQPNAYGTFTLVNDVDIEVYLRGVVPH
EECCEEEEEEECCCEEEECCCCCCCHHCCCEEEECCCCCEEEEEEECCEEEEEEEECCCC
EIGPNAPDNAVEAQTIIARTYALRNLRRFEADDYELCATIHCQVYKGLQGTSPRIDQAIA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHH
RTKGLVLTYNNELVDALYSSTTGGVTASFSDVWDGAERPYLKAVIDSPNPVWDLKGNSLA
HHCCEEEEECCHHHHHHHHCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCEEECCCCCCH
DEQAFRKFIALNQGFNETGRTVFRWERSATLQELATTLQTYLERTQNPLAGIQTVQKLEI
HHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KRRSPSGRVLELDVTTDRGIVKLLKNEIRSALGPPRSTLFYLQPNLNPQNQLTGYTFVGG
HCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECC
GFGHGVGMSQYGSYNLANLGWSAARILQFYYPGTTLQPLDESIVFWRETP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1357079; 1356138; 9384377 [H]