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The map label for this gene is 170078231

Identifier: 170078231

GI number: 170078231

Start: 1703613

End: 1705112

Strand: Direct

Name: 170078231

Synonym: SYNPCC7002_A1623

Alternate gene names: NA

Gene position: 1703613-1705112 (Clockwise)

Preceding gene: 170078223

Following gene: 170078234

Centisome position: 56.64

GC content: 47.27

Gene sequence:

>1500_bases
ATGAGTAAGAGCAAGATTGCGGTCATTGGGGCGGGCATTGGCGGTTTAACGGCGGGGGCTTTGTTGGCGAAACGGGGCTA
CGATGTCACGGTTTATGAACAGGCGGCGATCGCCGGGGGCTGTGCGTCCACTTTTAAGCGTCGGGGTTTTACCTTCGATG
TAGGGGCGACCCAGGTGGCGGGCTTAGAAGTAGGAGGGATTCACCAGCGTATTTTTCAAGAATTGGGCGTCGCTTTACCC
GAAGCAACGGTTTGTGATCCGGCTTGTGCGGTGTTTTTACCGGGCGAAACAGAACCCATCAACGTTTGGCGTGATGCGGA
AAAGTGGGAAGCTGAACGACTCAAACAGTTTCCCACGAGCAAAAATTTTTGGCATTTATTAAAAATTTTATTTGCGGCGA
GTTGGCAATTTCAAGGCCGCGATCCGGTGGTGCCACCCCGTAATCCTTGGGATATTTTGCAGTTAATCAAGGCATTTCGT
TTAAATACGTTGATCACAGTTCCCTTTGCTTTGATGACGGTTTTAGACGCGTTGAAATTATGTAATGTTGCCGCAGATCA
AAGATTAAAAACTTTTTTGGATTTGCAGTTAAAGCTGTACTCCCAAGTTGATAGTTCCGAAACTGCACTACTCTACGGTG
CGACGGCCCTCGCCGTTTCCCAAACGCCCCAAGGTTTATTTCATCTCCAGGGTAGTATGCAAGCCTTGAGCGATCGCCTG
ATCGAAGCCCTCGAAAAACATGGGGGGAAATTACTCACTCGCCACCGCATTAAGGAAATTAACTTGGGTCAAAGCAAGCC
TCAATTAACAGTCTTTGATCAGCGTCAAAATGAAATTGTTACACAAGCTTTTGATCATGTAGTCGCGAACACCACGGTTC
AAGATTTAATTAAAATTTCAGAGCATCCGCCCAAATCAATTTTTAAAAAAATCTATCAAAAACGCATTGAAAATTTGCCA
GATCCATCGGGAGCCTTTGTTGTTTACTTAGGGGTTAAGGAAGCGGCAATTCCCAAGAATTGTCCACCTCACCTGCAATT
TCTCTATGATTATGACCAAGCAATTGGCGAAAATAATTCCCTCTTTGTTTCGGTGAGTAAGCCGAATGATGGTCGCGCCC
CAGAGGGTCACCGGACGATTATCGCCTCCTCTTTTGTCGATCCTGATCCTTGGTTTGGGAAAGATTACGCCGAACTGAAA
GAGCGTTACACCCAGGAGGCGATCGCCAAATTAAATCGCTATTTTGACCTTTCCCCAGAAAATATCATTGTTCAAGAAGC
CGGAACGCCGCGCACCTTTGCTTTCTATACGGCTCGACACAAAGGCTTTGTTGGTGGCGTGGGACAGCGAATTTCTACCT
TTGCGCCCTTTGGATTCGCCACCAGAACACCGTTTAAAAATGTTTGGCTCGTGGGAGATTCTGTCCATCCGGGAGAAGGT
ACAGCTGGGGTAAGTTATTCTGCCCTGACCGCTGTACGCCAAATTGAACAGGTCAGCTAA

Upstream 100 bases:

>100_bases
TTCGGCAATCTCTCTTTATCAGGGGCGATCACCTTTTTGTCAAGAAAGGCAAAATTTTGGACAATAGGGAAAGGTAAAGA
ATTGTAACGGATGTTTCGGG

Downstream 100 bases:

>100_bases
ACAGCCAATAGATGAGCTTCAATTTTTTTCATTCGTTGATTAAATTCTCGCCAATGATCTCGATGAAAGAGATATTGATT
AATATCTGCAATTTCTTGGG

Product: FAD dependent oxidoreductase; role in carotenoid biosynthesis

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Carotenoid Isomerase; Carotene Isomerase; C-3 4' Desaturase CrtD; Phytoene Dehydrogenase; Phytoene Dehydrogenase ; All-Trans-Retinol; Phytoene Dehydrogenase-Related Protein; Lycopene Cyclase; Phytoene Dehydrogenase And Related Protein; Carotenoid Cis-Trans Isomerase; Phytoene Dehydrogenase And Related Proteins-Like; Phytoene Dehydrogenase And Related Proteins; Phytoene Dehydrogenase-Like; Phytoene Dehydrogenase/Carotenoid Isomerase; Phytoene Dehydrogenase Or

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSKSKIAVIGAGIGGLTAGALLAKRGYDVTVYEQAAIAGGCASTFKRRGFTFDVGATQVAGLEVGGIHQRIFQELGVALP
EATVCDPACAVFLPGETEPINVWRDAEKWEAERLKQFPTSKNFWHLLKILFAASWQFQGRDPVVPPRNPWDILQLIKAFR
LNTLITVPFALMTVLDALKLCNVAADQRLKTFLDLQLKLYSQVDSSETALLYGATALAVSQTPQGLFHLQGSMQALSDRL
IEALEKHGGKLLTRHRIKEINLGQSKPQLTVFDQRQNEIVTQAFDHVVANTTVQDLIKISEHPPKSIFKKIYQKRIENLP
DPSGAFVVYLGVKEAAIPKNCPPHLQFLYDYDQAIGENNSLFVSVSKPNDGRAPEGHRTIIASSFVDPDPWFGKDYAELK
ERYTQEAIAKLNRYFDLSPENIIVQEAGTPRTFAFYTARHKGFVGGVGQRISTFAPFGFATRTPFKNVWLVGDSVHPGEG
TAGVSYSALTAVRQIEQVS

Sequences:

>Translated_499_residues
MSKSKIAVIGAGIGGLTAGALLAKRGYDVTVYEQAAIAGGCASTFKRRGFTFDVGATQVAGLEVGGIHQRIFQELGVALP
EATVCDPACAVFLPGETEPINVWRDAEKWEAERLKQFPTSKNFWHLLKILFAASWQFQGRDPVVPPRNPWDILQLIKAFR
LNTLITVPFALMTVLDALKLCNVAADQRLKTFLDLQLKLYSQVDSSETALLYGATALAVSQTPQGLFHLQGSMQALSDRL
IEALEKHGGKLLTRHRIKEINLGQSKPQLTVFDQRQNEIVTQAFDHVVANTTVQDLIKISEHPPKSIFKKIYQKRIENLP
DPSGAFVVYLGVKEAAIPKNCPPHLQFLYDYDQAIGENNSLFVSVSKPNDGRAPEGHRTIIASSFVDPDPWFGKDYAELK
ERYTQEAIAKLNRYFDLSPENIIVQEAGTPRTFAFYTARHKGFVGGVGQRISTFAPFGFATRTPFKNVWLVGDSVHPGEG
TAGVSYSALTAVRQIEQVS
>Mature_498_residues
SKSKIAVIGAGIGGLTAGALLAKRGYDVTVYEQAAIAGGCASTFKRRGFTFDVGATQVAGLEVGGIHQRIFQELGVALPE
ATVCDPACAVFLPGETEPINVWRDAEKWEAERLKQFPTSKNFWHLLKILFAASWQFQGRDPVVPPRNPWDILQLIKAFRL
NTLITVPFALMTVLDALKLCNVAADQRLKTFLDLQLKLYSQVDSSETALLYGATALAVSQTPQGLFHLQGSMQALSDRLI
EALEKHGGKLLTRHRIKEINLGQSKPQLTVFDQRQNEIVTQAFDHVVANTTVQDLIKISEHPPKSIFKKIYQKRIENLPD
PSGAFVVYLGVKEAAIPKNCPPHLQFLYDYDQAIGENNSLFVSVSKPNDGRAPEGHRTIIASSFVDPDPWFGKDYAELKE
RYTQEAIAKLNRYFDLSPENIIVQEAGTPRTFAFYTARHKGFVGGVGQRISTFAPFGFATRTPFKNVWLVGDSVHPGEGT
AGVSYSALTAVRQIEQVS

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55076; Mature: 54944

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSKIAVIGAGIGGLTAGALLAKRGYDVTVYEQAAIAGGCASTFKRRGFTFDVGATQVA
CCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEHHHHHHCHHHHHHHHCCCEEECCCCEEC
GLEVGGIHQRIFQELGVALPEATVCDPACAVFLPGETEPINVWRDAEKWEAERLKQFPTS
CCEECHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHCCCC
KNFWHLLKILFAASWQFQGRDPVVPPRNPWDILQLIKAFRLNTLITVPFALMTVLDALKL
CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CNVAADQRLKTFLDLQLKLYSQVDSSETALLYGATALAVSQTPQGLFHLQGSMQALSDRL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHEEECCCCCCCEEHHHHHHHHHHHH
IEALEKHGGKLLTRHRIKEINLGQSKPQLTVFDQRQNEIVTQAFDHVVANTTVQDLIKIS
HHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC
EHPPKSIFKKIYQKRIENLPDPSGAFVVYLGVKEAAIPKNCPPHLQFLYDYDQAIGENNS
CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC
LFVSVSKPNDGRAPEGHRTIIASSFVDPDPWFGKDYAELKERYTQEAIAKLNRYFDLSPE
EEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
NIIVQEAGTPRTFAFYTARHKGFVGGVGQRISTFAPFGFATRTPFKNVWLVGDSVHPGEG
CEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
TAGVSYSALTAVRQIEQVS
CCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKSKIAVIGAGIGGLTAGALLAKRGYDVTVYEQAAIAGGCASTFKRRGFTFDVGATQVA
CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEHHHHHHCHHHHHHHHCCCEEECCCCEEC
GLEVGGIHQRIFQELGVALPEATVCDPACAVFLPGETEPINVWRDAEKWEAERLKQFPTS
CCEECHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHCCCC
KNFWHLLKILFAASWQFQGRDPVVPPRNPWDILQLIKAFRLNTLITVPFALMTVLDALKL
CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CNVAADQRLKTFLDLQLKLYSQVDSSETALLYGATALAVSQTPQGLFHLQGSMQALSDRL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHEEECCCCCCCEEHHHHHHHHHHHH
IEALEKHGGKLLTRHRIKEINLGQSKPQLTVFDQRQNEIVTQAFDHVVANTTVQDLIKIS
HHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC
EHPPKSIFKKIYQKRIENLPDPSGAFVVYLGVKEAAIPKNCPPHLQFLYDYDQAIGENNS
CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC
LFVSVSKPNDGRAPEGHRTIIASSFVDPDPWFGKDYAELKERYTQEAIAKLNRYFDLSPE
EEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
NIIVQEAGTPRTFAFYTARHKGFVGGVGQRISTFAPFGFATRTPFKNVWLVGDSVHPGEG
CEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
TAGVSYSALTAVRQIEQVS
CCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA