| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078221
Identifier: 170078221
GI number: 170078221
Start: 1693452
End: 1693910
Strand: Direct
Name: 170078221
Synonym: SYNPCC7002_A1613
Alternate gene names: NA
Gene position: 1693452-1693910 (Clockwise)
Preceding gene: 170078220
Following gene: 170078223
Centisome position: 56.3
GC content: 53.59
Gene sequence:
>459_bases ATGGGGGAGAGCATCCCAGAACAGCAGGCGATCGCCGAAACGATTGCCCTCTTAGAATATTATGGCTTTGAACTCAATGG TCAGACCGCTGCAGCCACCATTGAGCAATGGTGTGCCCATAGTCCCGTCGCCTGGGTTCGTCTAGCTGTCCTCGAAGCCC TATATCGGGGGCGCTATAAAAAAATTTCGGTCACGGCAATCCTCCGGGTTTGGCAACGCTGGGAAAAGCCCCAAGTCCAG TTCAATCGAGAATTTGAAAGCCTGATTTGTGCCGAACTGCCGACCAAAGTCGCCCCCACTCCGCCTGCACAATCTCGCCC CGAAGCCTCTATCGCTTCAGCACTACCGTCCCCAAGTTTCGGCATTGCCACCTTTTCGCCACCACCGGAGTTAGCAAATT CCGATGCTTATCAAAAACTCAAGGCGATCGCCACTCAGCCAGACACTAAAAAACCCTAG
Upstream 100 bases:
>100_bases CCGCTCAGAAATTTGACGGCAAAATGTTCACCTTTAGATTGTTGTAAACCTCACCTTTAGGGGATGATAGAAACCAGTCA CCAAGAGGAGAACAGTTGCT
Downstream 100 bases:
>100_bases GAATACGCTAGGGCTGAGTGCAAAAGCCGGATGTTAAATGATGCCGTTGGTGGCTCGTAGTGCGTTGAAGTTATTAAGAG AATTTTTTTAAAGTTCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MGESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYKKISVTAILRVWQRWEKPQVQ FNREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSFGIATFSPPPELANSDAYQKLKAIATQPDTKKP
Sequences:
>Translated_152_residues MGESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYKKISVTAILRVWQRWEKPQVQ FNREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSFGIATFSPPPELANSDAYQKLKAIATQPDTKKP >Mature_151_residues GESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYKKISVTAILRVWQRWEKPQVQF NREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSFGIATFSPPPELANSDAYQKLKAIATQPDTKKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16797; Mature: 16666
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYK CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KISVTAILRVWQRWEKPQVQFNREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCC GIATFSPPPELANSDAYQKLKAIATQPDTKKP CCEECCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYK CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KISVTAILRVWQRWEKPQVQFNREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCC GIATFSPPPELANSDAYQKLKAIATQPDTKKP CCEECCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA