The gene/protein map for NC_010475 is currently unavailable.
Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078221

Identifier: 170078221

GI number: 170078221

Start: 1693452

End: 1693910

Strand: Direct

Name: 170078221

Synonym: SYNPCC7002_A1613

Alternate gene names: NA

Gene position: 1693452-1693910 (Clockwise)

Preceding gene: 170078220

Following gene: 170078223

Centisome position: 56.3

GC content: 53.59

Gene sequence:

>459_bases
ATGGGGGAGAGCATCCCAGAACAGCAGGCGATCGCCGAAACGATTGCCCTCTTAGAATATTATGGCTTTGAACTCAATGG
TCAGACCGCTGCAGCCACCATTGAGCAATGGTGTGCCCATAGTCCCGTCGCCTGGGTTCGTCTAGCTGTCCTCGAAGCCC
TATATCGGGGGCGCTATAAAAAAATTTCGGTCACGGCAATCCTCCGGGTTTGGCAACGCTGGGAAAAGCCCCAAGTCCAG
TTCAATCGAGAATTTGAAAGCCTGATTTGTGCCGAACTGCCGACCAAAGTCGCCCCCACTCCGCCTGCACAATCTCGCCC
CGAAGCCTCTATCGCTTCAGCACTACCGTCCCCAAGTTTCGGCATTGCCACCTTTTCGCCACCACCGGAGTTAGCAAATT
CCGATGCTTATCAAAAACTCAAGGCGATCGCCACTCAGCCAGACACTAAAAAACCCTAG

Upstream 100 bases:

>100_bases
CCGCTCAGAAATTTGACGGCAAAATGTTCACCTTTAGATTGTTGTAAACCTCACCTTTAGGGGATGATAGAAACCAGTCA
CCAAGAGGAGAACAGTTGCT

Downstream 100 bases:

>100_bases
GAATACGCTAGGGCTGAGTGCAAAAGCCGGATGTTAAATGATGCCGTTGGTGGCTCGTAGTGCGTTGAAGTTATTAAGAG
AATTTTTTTAAAGTTCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MGESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYKKISVTAILRVWQRWEKPQVQ
FNREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSFGIATFSPPPELANSDAYQKLKAIATQPDTKKP

Sequences:

>Translated_152_residues
MGESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYKKISVTAILRVWQRWEKPQVQ
FNREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSFGIATFSPPPELANSDAYQKLKAIATQPDTKKP
>Mature_151_residues
GESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYKKISVTAILRVWQRWEKPQVQF
NREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSFGIATFSPPPELANSDAYQKLKAIATQPDTKKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16797; Mature: 16666

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYK
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
KISVTAILRVWQRWEKPQVQFNREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCC
GIATFSPPPELANSDAYQKLKAIATQPDTKKP
CCEECCCCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GESIPEQQAIAETIALLEYYGFELNGQTAAATIEQWCAHSPVAWVRLAVLEALYRGRYK
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
KISVTAILRVWQRWEKPQVQFNREFESLICAELPTKVAPTPPAQSRPEASIASALPSPSF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCC
GIATFSPPPELANSDAYQKLKAIATQPDTKKP
CCEECCCCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA