Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078220

Identifier: 170078220

GI number: 170078220

Start: 1692948

End: 1693367

Strand: Direct

Name: 170078220

Synonym: SYNPCC7002_A1612

Alternate gene names: NA

Gene position: 1692948-1693367 (Clockwise)

Preceding gene: 170078219

Following gene: 170078221

Centisome position: 56.28

GC content: 52.14

Gene sequence:

>420_bases
TTGGCCCAATTGAAGCAGGGAGAACTTTTGATGGTAAACCCCCGCCGTAAAAATGGACTGATTTTGCGCAAAGCCTACCA
CGGCGATTTTGCTGGCCCAGGGGCGATCATTGGTGGCGTTTTTGATCAAGATGTAGAATCGGTAATCCCCGTGGGTGCCC
TGTCCCTGTTGGTGCCAGCGCCCGGTACTGAGCGGGAAAAAGCCTACCTCATTCGGCGGCAGTGGGTCCGACTCCTGAAG
CAAATCACCGACAAACCCGTGCCAGAACAGCGGGCCCAAATTATTTTAAATCAGTTTGAAAATTGGTTTGACCTCGACAC
GGCCGCCCAACTGTCCGATGATGTCTTTGCTGAGTTGGTCGGGGTACTGCCCCAAACTATTGCTAAAGTGCGTAACCGTG
TTAACCGCTCAGAAATTTGA

Upstream 100 bases:

>100_bases
TCACCGCCGCTGATGTGGCGATCGCCACCGTTCTTTATCCTTTGCCATGGGCTCTACTCCCCCCTCAACGACAAATTCTC
CCATAGACCATCTTGAAATT

Downstream 100 bases:

>100_bases
CGGCAAAATGTTCACCTTTAGATTGTTGTAAACCTCACCTTTAGGGGATGATAGAAACCAGTCACCAAGAGGAGAACAGT
TGCTATGGGGGAGAGCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAQLKQGELLMVNPRRKNGLILRKAYHGDFAGPGAIIGGVFDQDVESVIPVGALSLLVPAPGTEREKAYLIRRQWVRLLK
QITDKPVPEQRAQIILNQFENWFDLDTAAQLSDDVFAELVGVLPQTIAKVRNRVNRSEI

Sequences:

>Translated_139_residues
MAQLKQGELLMVNPRRKNGLILRKAYHGDFAGPGAIIGGVFDQDVESVIPVGALSLLVPAPGTEREKAYLIRRQWVRLLK
QITDKPVPEQRAQIILNQFENWFDLDTAAQLSDDVFAELVGVLPQTIAKVRNRVNRSEI
>Mature_138_residues
AQLKQGELLMVNPRRKNGLILRKAYHGDFAGPGAIIGGVFDQDVESVIPVGALSLLVPAPGTEREKAYLIRRQWVRLLKQ
ITDKPVPEQRAQIILNQFENWFDLDTAAQLSDDVFAELVGVLPQTIAKVRNRVNRSEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15571; Mature: 15440

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLKQGELLMVNPRRKNGLILRKAYHGDFAGPGAIIGGVFDQDVESVIPVGALSLLVPA
CCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHCHHHHHHEECC
PGTEREKAYLIRRQWVRLLKQITDKPVPEQRAQIILNQFENWFDLDTAAQLSDDVFAELV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVLPQTIAKVRNRVNRSEI
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AQLKQGELLMVNPRRKNGLILRKAYHGDFAGPGAIIGGVFDQDVESVIPVGALSLLVPA
CCCCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHCHHHHHHEECC
PGTEREKAYLIRRQWVRLLKQITDKPVPEQRAQIILNQFENWFDLDTAAQLSDDVFAELV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVLPQTIAKVRNRVNRSEI
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA