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The map label for this gene is ddl

Identifier: 170078193

GI number: 170078193

Start: 1666178

End: 1667239

Strand: Direct

Name: ddl

Synonym: SYNPCC7002_A1584

Alternate gene names: 170078193

Gene position: 1666178-1667239 (Clockwise)

Preceding gene: 170078192

Following gene: 170078195

Centisome position: 55.39

GC content: 53.58

Gene sequence:

>1062_bases
ATGGCACGGCAACGGGTTGGTTTATTGTTTGGCGGGAAATCTGGGGAGCATGATGTTTCCATCGTTTCAGCGGCGGCGAT
CGCCAAAGCCTTTGCCCAGGAAGATAACCCAGACAAATACGAACTCCTCCCGTTTTACATTGACCGTAATGGTATTTGGC
ACGACCCAGAGATTTCCCAACAGGTACTCACTGCCGGAAAAGCCCTCCCCGTAGAAACCGTTGATCCGGCCAGTCGTTGG
CAATTTCCCCCAGCGGCCCCCAGCATTGATGCGTGGTTTCCCATTGTCCACGGGCCCAACGGTGAAGATGGCACCCTCCA
AGGCCTGCTGACCCTCATGGAAAAGCCCTTTGTGGGGAGTAAAGTGCTCGGTTCGGCGGCAGGCATGGATAAGCTGGCGA
TGAAAATGGTTTTTGCCCAGGCGGGTTTGGCCCAGGTGGATTATGTGGGCGTGTTGCGTTCTGAAGTGTGGTCTGGCCCC
TGTGTTTTCCCAAAGGTCTGCGACAAAATTGAAGCCCAGCTTGATTACCCGATGTTCGTCAAACCCGCAAATCTGGGGTC
TTCCGTGGGGATTAGTAAAGTGCGCACCCGTGACGAACTGGAAAAAGCGCTGGATCTCGCGGCGGAATATGACCGTCGGC
TTATTGTTGAAGCTGGGGTAACAGCCCGGGAAGTAGAATGTGCCGTCCTAGGAAATGATCAGCCCAAAGCTTCGGTGGTG
GGGGAAATTCGCTTTGACAGTGATTTCTACGACTACGAAACGAAGTACACCGACGGGAAATCTAGTATGCACATTCCTGC
TGAGATCCCAGGGGCGATCGCCCAACAAATTCAAGAACTCGCCATTAAAGCGTTCCAAGCCCTCGACTGCCGTGGCATTG
CCCGGGTGGATTTTTTCTATGTGGAAGCGACCCAGACGGTGTTAATTAACGAAATTAATACCCTGCCTGGGTTTACAGCC
CTGAGTATGTACCCGCAATTGTGGCAACAGAGCGGCGTTCCCTTCCCTCAATTGGTGGATCGCCTGGTGCAATTTGCCCT
GGAGGATGTCCCACAGGCTTAA

Upstream 100 bases:

>100_bases
AAACCATTCCCCTGTGGCATCCGATGGAACTGCTCGATTTTGCCATTCGCGGCGTCCCCTTGCCCCTATAATGATCCCGA
TATCTATGGTGGAGAACGTG

Downstream 100 bases:

>100_bases
CATTCTCGGAAAATTCTTTGTAAAAAAGCCCCCCTAAATTGAGCTAGGGGGGTATTTGTTAGAGCAAAAGAACGGTTAAA
AGTTTAGGCATCATCGAGGG

Product: D-alanyl-alanine synthetase A

Products: NA

Alternate protein names: D-Ala-D-Ala ligase; D-alanylalanine synthetase

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MARQRVGLLFGGKSGEHDVSIVSAAAIAKAFAQEDNPDKYELLPFYIDRNGIWHDPEISQQVLTAGKALPVETVDPASRW
QFPPAAPSIDAWFPIVHGPNGEDGTLQGLLTLMEKPFVGSKVLGSAAGMDKLAMKMVFAQAGLAQVDYVGVLRSEVWSGP
CVFPKVCDKIEAQLDYPMFVKPANLGSSVGISKVRTRDELEKALDLAAEYDRRLIVEAGVTAREVECAVLGNDQPKASVV
GEIRFDSDFYDYETKYTDGKSSMHIPAEIPGAIAQQIQELAIKAFQALDCRGIARVDFFYVEATQTVLINEINTLPGFTA
LSMYPQLWQQSGVPFPQLVDRLVQFALEDVPQA

Sequences:

>Translated_353_residues
MARQRVGLLFGGKSGEHDVSIVSAAAIAKAFAQEDNPDKYELLPFYIDRNGIWHDPEISQQVLTAGKALPVETVDPASRW
QFPPAAPSIDAWFPIVHGPNGEDGTLQGLLTLMEKPFVGSKVLGSAAGMDKLAMKMVFAQAGLAQVDYVGVLRSEVWSGP
CVFPKVCDKIEAQLDYPMFVKPANLGSSVGISKVRTRDELEKALDLAAEYDRRLIVEAGVTAREVECAVLGNDQPKASVV
GEIRFDSDFYDYETKYTDGKSSMHIPAEIPGAIAQQIQELAIKAFQALDCRGIARVDFFYVEATQTVLINEINTLPGFTA
LSMYPQLWQQSGVPFPQLVDRLVQFALEDVPQA
>Mature_352_residues
ARQRVGLLFGGKSGEHDVSIVSAAAIAKAFAQEDNPDKYELLPFYIDRNGIWHDPEISQQVLTAGKALPVETVDPASRWQ
FPPAAPSIDAWFPIVHGPNGEDGTLQGLLTLMEKPFVGSKVLGSAAGMDKLAMKMVFAQAGLAQVDYVGVLRSEVWSGPC
VFPKVCDKIEAQLDYPMFVKPANLGSSVGISKVRTRDELEKALDLAAEYDRRLIVEAGVTAREVECAVLGNDQPKASVVG
EIRFDSDFYDYETKYTDGKSSMHIPAEIPGAIAQQIQELAIKAFQALDCRGIARVDFFYVEATQTVLINEINTLPGFTAL
SMYPQLWQQSGVPFPQLVDRLVQFALEDVPQA

Specific function: Cell wall formation

COG id: COG1181

COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain

Homologues:

Organism=Escherichia coli, GI1786579, Length=363, Percent_Identity=43.5261707988981, Blast_Score=286, Evalue=1e-78,
Organism=Escherichia coli, GI1786280, Length=344, Percent_Identity=33.4302325581395, Blast_Score=164, Evalue=7e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DDL_SYNP2 (B1XNQ0)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734831.1
- ProteinModelPortal:   B1XNQ0
- SMR:   B1XNQ0
- GeneID:   6055268
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1584
- HOGENOM:   HBG427092
- OMA:   FTDISMY
- ProtClustDB:   PRK01966
- GO:   GO:0005737
- HAMAP:   MF_00047
- InterPro:   IPR011761
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR000291
- InterPro:   IPR005905
- InterPro:   IPR011095
- InterPro:   IPR011127
- InterPro:   IPR013817
- InterPro:   IPR016185
- Gene3D:   G3DSA:3.30.1490.20
- Gene3D:   G3DSA:3.30.470.20
- Gene3D:   G3DSA:3.40.50.20
- TIGRFAMs:   TIGR01205

Pfam domain/function: PF07478 Dala_Dala_lig_C; PF01820 Dala_Dala_lig_N; SSF52440 PreATP-grasp-like

EC number: =6.3.2.4

Molecular weight: Translated: 38625; Mature: 38494

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50975 ATP_GRASP; PS00843 DALA_DALA_LIGASE_1; PS00844 DALA_DALA_LIGASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQRVGLLFGGKSGEHDVSIVSAAAIAKAFAQEDNPDKYELLPFYIDRNGIWHDPEISQ
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHH
QVLTAGKALPVETVDPASRWQFPPAAPSIDAWFPIVHGPNGEDGTLQGLLTLMEKPFVGS
HHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCH
KVLGSAAGMDKLAMKMVFAQAGLAQVDYVGVLRSEVWSGPCVFPKVCDKIEAQLDYPMFV
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEE
KPANLGSSVGISKVRTRDELEKALDLAAEYDRRLIVEAGVTAREVECAVLGNDQPKASVV
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHEEEEEEECCCCCCCEEE
GEIRFDSDFYDYETKYTDGKSSMHIPAEIPGAIAQQIQELAIKAFQALDCRGIARVDFFY
EEEEECCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
VEATQTVLINEINTLPGFTALSMYPQLWQQSGVPFPQLVDRLVQFALEDVPQA
EECHHEEEEHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARQRVGLLFGGKSGEHDVSIVSAAAIAKAFAQEDNPDKYELLPFYIDRNGIWHDPEISQ
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHH
QVLTAGKALPVETVDPASRWQFPPAAPSIDAWFPIVHGPNGEDGTLQGLLTLMEKPFVGS
HHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCH
KVLGSAAGMDKLAMKMVFAQAGLAQVDYVGVLRSEVWSGPCVFPKVCDKIEAQLDYPMFV
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEE
KPANLGSSVGISKVRTRDELEKALDLAAEYDRRLIVEAGVTAREVECAVLGNDQPKASVV
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHEEEEEEECCCCCCCEEE
GEIRFDSDFYDYETKYTDGKSSMHIPAEIPGAIAQQIQELAIKAFQALDCRGIARVDFFY
EEEEECCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
VEATQTVLINEINTLPGFTALSMYPQLWQQSGVPFPQLVDRLVQFALEDVPQA
EECHHEEEEHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA