The gene/protein map for NC_010475 is currently unavailable.
Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078187

Identifier: 170078187

GI number: 170078187

Start: 1661502

End: 1662014

Strand: Direct

Name: 170078187

Synonym: SYNPCC7002_A1578

Alternate gene names: NA

Gene position: 1661502-1662014 (Clockwise)

Preceding gene: 170078186

Following gene: 170078189

Centisome position: 55.24

GC content: 46.0

Gene sequence:

>513_bases
ATGTTCAACTACGCCCTCAAAAAGCAACTTTTTTCCCTCAACTTATCGGCTATTGTCATGATAATCTTGGGGTTTTGGTT
GAGTGCCTCTTTCCTCCTCGATTTTGTGATCATTCCTGTGTTTTCAATGACCGGGATGATGGCTGACAGCGGCTTTATCA
GCACCGGATATGTTTTGTTTGGGGTGTTTAACCGTTTGGAGGTGGTCTGTGCCGCTGGGATCTTAACGATCTTTTTTGGG
TTTAAATTTGAACATCTTTTTGGCGATCGCCAAGCCTTAAATGCCCTCGTCATTGCCAGTATCCTGTTAAATATTGCTTT
GCTTTATACCTATTTGATTACGCCTCAGTTGGCTGGCTTTGGCCTAGAAATGACCGGATTCAATGGCACGGCAACGATGC
CTTTACAGATGTCAGTGTGGCACAGTTTGTATTGGGTCTTAGAGGCCGCGAAATTCATGTTGGGGATCACTTTGCTGCGG
TGGTGCTACCGTCGTGCCTGTGCGATCGCCTAA

Upstream 100 bases:

>100_bases
GAGTATTACTAGATTATGTCGTTTTGGGGCAATGCTACCGATGGAGTTCCCTAAGCTTTTAAGCTTAAAAAAGTAAGGCC
CAGTTTCGGGAGAAGAAACC

Downstream 100 bases:

>100_bases
ACAATCAATTGACTTTTTAAGTAAAACGATGCCGCCACCAGGCGGTATTTTTATGGGAAATTAGGTTTTCGAGAAGCCAA
TTTATCCGCCAAGCGCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLFGVFNRLEVVCAAGILTIFFG
FKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGFGLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLR
WCYRRACAIA

Sequences:

>Translated_170_residues
MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLFGVFNRLEVVCAAGILTIFFG
FKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGFGLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLR
WCYRRACAIA
>Mature_170_residues
MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLFGVFNRLEVVCAAGILTIFFG
FKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGFGLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLR
WCYRRACAIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19014; Mature: 19014

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLF
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GVFNRLEVVCAAGILTIFFGFKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLRWCYRRACAIA
CEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLF
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GVFNRLEVVCAAGILTIFFGFKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLRWCYRRACAIA
CEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA