| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is lgt [H]
Identifier: 170078171
GI number: 170078171
Start: 1648493
End: 1649368
Strand: Reverse
Name: lgt [H]
Synonym: SYNPCC7002_A1562
Alternate gene names: 170078171
Gene position: 1649368-1648493 (Counterclockwise)
Preceding gene: 170078172
Following gene: 170078170
Centisome position: 54.83
GC content: 48.74
Gene sequence:
>876_bases ATGATGATCTTCGCTTGGCAGTTCCAATCCCCTGGCCCCATTTTGTTTGAGGTGGGTAATTTTGCAATCCGTTGGTATGG TCTTTTAATCGCGATCGCCGTGTTGATCGGGGTGAATCTCTCTCAATTTTTGGCAAAGCGACGGGGGATTAAACCGGAGT TACTAGCCGATTACGTCATTTGGGGAATTATTGGGGCGATTCCCTGCGCGCGACTGTATTATGTGCTATTTCAATGGCGC AGCTACGCCGATCGTCCCCAGGATATTATTGCGATCTGGCAAGGGGGTATCGCGATCCACGGGGCGATCCTTGGCGGTGT AATTGCGGCCTTAATTTTTTGTCGCTTGAATCGCCTGTCTTTTTGGCAACTGGGGGATTTAATTGCGCCTGCTTTGATTT TGGGGCAAGCCATTGGTCGCTGGGGAAATTTTTTCAATTCGGAAGCCTTTGGGGCACCAACCGATTTACCTTGGAAGCTT TATATTCCCCTCCAAAATCGCCCTTTAAACCTTGTGGAATATGAATATTTTCACCCGACTTTCCTCTATGAATCTGTCTG GAATCTTGGGGTTTTTGCATTACTCCTCTATTTATTTTTCTGGGGTTTGCGCCATGGCGATCGCCTCAAAACAGGCACAA TTTTTCTTGCCTACTGGATTGCCTACAGTGCTGGTCGCGTCTGGATCGAAGGCTTGCGCACTGACAGCTTGATGCTTGGT GGGATTCGCGTTGCCCAATTGGTCAGTTTGACAGGAATGGCCCTCGGTATTTTGGGATTAGTCTGGTTATATGTCCTGAA ACGACGCTTACCCGATGTGCGATCGCCGCGGGAATTGCGAGGGGCAGAAGCTATCCCAGAAAATTCCGAGACTTAA
Upstream 100 bases:
>100_bases TCGCGGCCTGTGATCCCCTCGAAATGACGATCAAAGGAGACTACCAGCCCCGTGGTAATGTGCATACTGTCATTGAAGTT ACCCACACCAAAGAACAAGC
Downstream 100 bases:
>100_bases ACCGTTACCATTGCTCCTCTAGTGACAACATCATCCATGGGCCAAACCATCCTCGTTACGGGCGCTGTCCGCTCCGGCAA AAGTGAATGGGCCGAACACC
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MMIFAWQFQSPGPILFEVGNFAIRWYGLLIAIAVLIGVNLSQFLAKRRGIKPELLADYVIWGIIGAIPCARLYYVLFQWR SYADRPQDIIAIWQGGIAIHGAILGGVIAALIFCRLNRLSFWQLGDLIAPALILGQAIGRWGNFFNSEAFGAPTDLPWKL YIPLQNRPLNLVEYEYFHPTFLYESVWNLGVFALLLYLFFWGLRHGDRLKTGTIFLAYWIAYSAGRVWIEGLRTDSLMLG GIRVAQLVSLTGMALGILGLVWLYVLKRRLPDVRSPRELRGAEAIPENSET
Sequences:
>Translated_291_residues MMIFAWQFQSPGPILFEVGNFAIRWYGLLIAIAVLIGVNLSQFLAKRRGIKPELLADYVIWGIIGAIPCARLYYVLFQWR SYADRPQDIIAIWQGGIAIHGAILGGVIAALIFCRLNRLSFWQLGDLIAPALILGQAIGRWGNFFNSEAFGAPTDLPWKL YIPLQNRPLNLVEYEYFHPTFLYESVWNLGVFALLLYLFFWGLRHGDRLKTGTIFLAYWIAYSAGRVWIEGLRTDSLMLG GIRVAQLVSLTGMALGILGLVWLYVLKRRLPDVRSPRELRGAEAIPENSET >Mature_291_residues MMIFAWQFQSPGPILFEVGNFAIRWYGLLIAIAVLIGVNLSQFLAKRRGIKPELLADYVIWGIIGAIPCARLYYVLFQWR SYADRPQDIIAIWQGGIAIHGAILGGVIAALIFCRLNRLSFWQLGDLIAPALILGQAIGRWGNFFNSEAFGAPTDLPWKL YIPLQNRPLNLVEYEYFHPTFLYESVWNLGVFALLLYLFFWGLRHGDRLKTGTIFLAYWIAYSAGRVWIEGLRTDSLMLG GIRVAQLVSLTGMALGILGLVWLYVLKRRLPDVRSPRELRGAEAIPENSET
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=293, Percent_Identity=27.6450511945392, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 32965; Mature: 32965
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIFAWQFQSPGPILFEVGNFAIRWYGLLIAIAVLIGVNLSQFLAKRRGIKPELLADYVI CEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH WGIIGAIPCARLYYVLFQWRSYADRPQDIIAIWQGGIAIHGAILGGVIAALIFCRLNRLS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC FWQLGDLIAPALILGQAIGRWGNFFNSEAFGAPTDLPWKLYIPLQNRPLNLVEYEYFHPT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHH FLYESVWNLGVFALLLYLFFWGLRHGDRLKTGTIFLAYWIAYSAGRVWIEGLRTDSLMLG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHEECCCCCHHHHH GIRVAQLVSLTGMALGILGLVWLYVLKRRLPDVRSPRELRGAEAIPENSET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MMIFAWQFQSPGPILFEVGNFAIRWYGLLIAIAVLIGVNLSQFLAKRRGIKPELLADYVI CEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH WGIIGAIPCARLYYVLFQWRSYADRPQDIIAIWQGGIAIHGAILGGVIAALIFCRLNRLS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC FWQLGDLIAPALILGQAIGRWGNFFNSEAFGAPTDLPWKLYIPLQNRPLNLVEYEYFHPT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHH FLYESVWNLGVFALLLYLFFWGLRHGDRLKTGTIFLAYWIAYSAGRVWIEGLRTDSLMLG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHEECCCCCHHHHH GIRVAQLVSLTGMALGILGLVWLYVLKRRLPDVRSPRELRGAEAIPENSET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]