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The map label for this gene is ycgR [H]

Identifier: 170078156

GI number: 170078156

Start: 1632603

End: 1633622

Strand: Reverse

Name: ycgR [H]

Synonym: SYNPCC7002_A1547

Alternate gene names: 170078156

Gene position: 1633622-1632603 (Counterclockwise)

Preceding gene: 170078157

Following gene: 170078155

Centisome position: 54.31

GC content: 52.06

Gene sequence:

>1020_bases
ATGAGTCAATTACACAATGCCTTTACCCTGTTTGTCAGCCTGTTGGTGGAGGCGATGCCCTTTCTGCTACTGGGGGTAAT
CCTTTCGAGTGTGCTGTTGGTGTGTGTAGATGAACGCCAACTGATCCAGCGTTTACCGAAAAATCCAGTTTTAGGGGCTT
TTATGGGCAGTTGCATCGGGTTTTTGTTTCCGGTGTGTGAATGTGGCAATGTGCCCGTGGCCCGTCGCTTTATGCTCCAG
GGGATTCCCACTTCCGTGGCGGTAGGTTTTTTGTTGTCGGCCCCCACCCTGAATCCGGTGGTAATTTGGTCGACTTGGAT
CGCCTTTCGGGGCCAACCGGAAATCGTCCTCTATCGGGTGCTGGGTTCCTTGGCGATCGCCACCATCGTCGGGACAGTGT
TTAGCGTCGAATCAGATCCCAAAAAGCTGCTCCAACCGAAACTGGCCCAACGCTTAAAATTTGTCCAGCAGGTCAACGAA
AACCAGGCCCAGGCAGCAAATACCAGCCCTCTGCTCCAATCGGGGACATTTTTCCTTGGTTCCCAGCAGACAGTCCCCCT
CGAAACAGTGGCGACCAAAATGCCAGCACCAGCGACGACCCAAGATCGGAGCTTTAAAACCCTCTTTGGGGCCTTGATTA
ACAATATTTCTGTGGAATTGCGGGAACTGGGGGCGGTATTAATTTTCGGCAGCGCGATCGCCGCGTTGATCCAAGTCTTT
GTGCCCAGGGAAGTCGTCTTGAGCCTCGGCCAAGGGACGATTACCTCCATTGTGGCGATGATGCTGTTGGCGGCGATTGT
TTCCATCTGTTCGACGGTGGATTCTTTCTTTGCCCTGTCCTTTGCTTCCACCTTCACGACGGGTTCCCTGCTGGCCTTTT
TGATTTTCGGGCCAATGATCGATATCAAAGCAGTCGGCCTGATGCTCTCAATTTTTAAACCCCGCTTTATCCTGTATTTT
TTCCTCTTGGCGGGTCAGCTCACCTTTCTTTTTGCCCTCGGCTATAGCTATTTCCTTTAG

Upstream 100 bases:

>100_bases
GGGACAGGAACCACGGTGATTGTCACATTTCCGACTGCGACTTCGGAACAAATTCCGACAGAAAACCGCCTCAGTTAGTG
CCCGCTGTTATTTTTTCTCC

Downstream 100 bases:

>100_bases
GGGGCCAGGGAATTTTTGCGGGGAGACGCGTTTCAGTTTTCCAGAAGTCCGCCGCAACGTACAATAAAGACCGTCTTCAC
AGTTTGAGTTCTATGCAGTA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSQLHNAFTLFVSLLVEAMPFLLLGVILSSVLLVCVDERQLIQRLPKNPVLGAFMGSCIGFLFPVCECGNVPVARRFMLQ
GIPTSVAVGFLLSAPTLNPVVIWSTWIAFRGQPEIVLYRVLGSLAIATIVGTVFSVESDPKKLLQPKLAQRLKFVQQVNE
NQAQAANTSPLLQSGTFFLGSQQTVPLETVATKMPAPATTQDRSFKTLFGALINNISVELRELGAVLIFGSAIAALIQVF
VPREVVLSLGQGTITSIVAMMLLAAIVSICSTVDSFFALSFASTFTTGSLLAFLIFGPMIDIKAVGLMLSIFKPRFILYF
FLLAGQLTFLFALGYSYFL

Sequences:

>Translated_339_residues
MSQLHNAFTLFVSLLVEAMPFLLLGVILSSVLLVCVDERQLIQRLPKNPVLGAFMGSCIGFLFPVCECGNVPVARRFMLQ
GIPTSVAVGFLLSAPTLNPVVIWSTWIAFRGQPEIVLYRVLGSLAIATIVGTVFSVESDPKKLLQPKLAQRLKFVQQVNE
NQAQAANTSPLLQSGTFFLGSQQTVPLETVATKMPAPATTQDRSFKTLFGALINNISVELRELGAVLIFGSAIAALIQVF
VPREVVLSLGQGTITSIVAMMLLAAIVSICSTVDSFFALSFASTFTTGSLLAFLIFGPMIDIKAVGLMLSIFKPRFILYF
FLLAGQLTFLFALGYSYFL
>Mature_338_residues
SQLHNAFTLFVSLLVEAMPFLLLGVILSSVLLVCVDERQLIQRLPKNPVLGAFMGSCIGFLFPVCECGNVPVARRFMLQG
IPTSVAVGFLLSAPTLNPVVIWSTWIAFRGQPEIVLYRVLGSLAIATIVGTVFSVESDPKKLLQPKLAQRLKFVQQVNEN
QAQAANTSPLLQSGTFFLGSQQTVPLETVATKMPAPATTQDRSFKTLFGALINNISVELRELGAVLIFGSAIAALIQVFV
PREVVLSLGQGTITSIVAMMLLAAIVSICSTVDSFFALSFASTFTTGSLLAFLIFGPMIDIKAVGLMLSIFKPRFILYFF
LLAGQLTFLFALGYSYFL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 36732; Mature: 36601

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLHNAFTLFVSLLVEAMPFLLLGVILSSVLLVCVDERQLIQRLPKNPVLGAFMGSCIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
FLFPVCECGNVPVARRFMLQGIPTSVAVGFLLSAPTLNPVVIWSTWIAFRGQPEIVLYRV
HHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHH
LGSLAIATIVGTVFSVESDPKKLLQPKLAQRLKFVQQVNENQAQAANTSPLLQSGTFFLG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCCEEEC
SQQTVPLETVATKMPAPATTQDRSFKTLFGALINNISVELRELGAVLIFGSAIAALIQVF
CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPREVVLSLGQGTITSIVAMMLLAAIVSICSTVDSFFALSFASTFTTGSLLAFLIFGPMI
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIKAVGLMLSIFKPRFILYFFLLAGQLTFLFALGYSYFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQLHNAFTLFVSLLVEAMPFLLLGVILSSVLLVCVDERQLIQRLPKNPVLGAFMGSCIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
FLFPVCECGNVPVARRFMLQGIPTSVAVGFLLSAPTLNPVVIWSTWIAFRGQPEIVLYRV
HHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHH
LGSLAIATIVGTVFSVESDPKKLLQPKLAQRLKFVQQVNENQAQAANTSPLLQSGTFFLG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCCEEEC
SQQTVPLETVATKMPAPATTQDRSFKTLFGALINNISVELRELGAVLIFGSAIAALIQVF
CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPREVVLSLGQGTITSIVAMMLLAAIVSICSTVDSFFALSFASTFTTGSLLAFLIFGPMI
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIKAVGLMLSIFKPRFILYFFLLAGQLTFLFALGYSYFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]