| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is dltR [H]
Identifier: 170078157
GI number: 170078157
Start: 1633645
End: 1634784
Strand: Reverse
Name: dltR [H]
Synonym: SYNPCC7002_A1548
Alternate gene names: 170078157
Gene position: 1634784-1633645 (Counterclockwise)
Preceding gene: 170078159
Following gene: 170078156
Centisome position: 54.35
GC content: 50.61
Gene sequence:
>1140_bases GTGGCGACCATTTTAGTCATCGAAGATGAACTCAATGTCTTAAGTATTTTGCGGGACATTCTAACCGCCGAAGGGTTTGC TGTAATCACAGCGACCGATGGGCAAATCGGCTTAGAAACGGCCTATGCGCAGCTCCCCGATCTCATTATTTGCGATGTAA ATTTACCGCGATTAGACGGGTACGGTGTCCTCAAGGCGCTCCATAGCAACTCAACCACCACCACTATTCCGTTTATTTTT CTGTCAGCCCGTGCTTCCCGTTCTGCCCAACGCCAAGGGATGGATCTAGGGGCCGATGACTACATTCCCAAGCCTTTTAC CCGTCAGGAACTGCTCAATGCGATCCGGGGACGCCTCAGTCGCCGTCAGGGTCTCGCCCAACATTCAGCGCAACAGTTAG AGCAACTGCGGCGCAATTTAACCATGGCCCTTCCCCATGAGCTGCGCACTCCCCTCCAGGGCATCATGACCTCAGCGGAG TTGCTGGGGGAATGTTGGGAAACCCTAGACCGCCAAGAAATCCGAGAAATTAGTGAGAGCATTCGTATTTCAGCCAGTCG CCTCCATAATTTAATCCAAAAGTTCTTGCTATACACCAAGCTCGATTTAGCCACCCACGATCCCGATGATTTTCACCTCT GGTATAGCCCTGTCACTGAGAAAAGTGACACGCTCATCACTACTTTGGCCCGACAAATTGCCAAACAATACCAGCGACCA GAGGACTTGAAGCTGGAGTTATGTGCGGCAAAGGTTGCAATCTCAGAGAAGTGGCTTGTTACCCTGGTGCAGGAAATTGT CGATAATGCGTTTAAATTTTCGGAGCACACTTCCCAAACCAAGAAACGCATTCTGCTGAAAAGTCGAATCAATGGCAATG TATGGCAGTTAGCGATCAAAGACCACGGTCGTGGCATGAGCCCAGAGCAGATTCGGGCCTTGGGGGCCTATATGCAGTTT GACCGTCAACAGTATGAGCAGCAGGGGTCTGGTCTCGGATTGGCGATCGCCGAACGGATCGCAAAAATTTATAATGGGAC GGTGACGATTAAGAGTACTGTAGGGACAGGAACCACGGTGATTGTCACATTTCCGACTGCGACTTCGGAACAAATTCCGA CAGAAAACCGCCTCAGTTAG
Upstream 100 bases:
>100_bases TAGCCCAGCCAATGCCCCTAACGTCTCTCCAGGCGGGACTGTGAGCTCTCTGCCATACCCTTTTTTCCCTCAACGCTCAT CAGAGGAGGTTCTAGATTTT
Downstream 100 bases:
>100_bases TGCCCGCTGTTATTTTTTCTCCATGAGTCAATTACACAATGCCTTTACCCTGTTTGTCAGCCTGTTGGTGGAGGCGATGC CCTTTCTGCTACTGGGGGTA
Product: two-component hybrid sensor and regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MATILVIEDELNVLSILRDILTAEGFAVITATDGQIGLETAYAQLPDLIICDVNLPRLDGYGVLKALHSNSTTTTIPFIF LSARASRSAQRQGMDLGADDYIPKPFTRQELLNAIRGRLSRRQGLAQHSAQQLEQLRRNLTMALPHELRTPLQGIMTSAE LLGECWETLDRQEIREISESIRISASRLHNLIQKFLLYTKLDLATHDPDDFHLWYSPVTEKSDTLITTLARQIAKQYQRP EDLKLELCAAKVAISEKWLVTLVQEIVDNAFKFSEHTSQTKKRILLKSRINGNVWQLAIKDHGRGMSPEQIRALGAYMQF DRQQYEQQGSGLGLAIAERIAKIYNGTVTIKSTVGTGTTVIVTFPTATSEQIPTENRLS
Sequences:
>Translated_379_residues MATILVIEDELNVLSILRDILTAEGFAVITATDGQIGLETAYAQLPDLIICDVNLPRLDGYGVLKALHSNSTTTTIPFIF LSARASRSAQRQGMDLGADDYIPKPFTRQELLNAIRGRLSRRQGLAQHSAQQLEQLRRNLTMALPHELRTPLQGIMTSAE LLGECWETLDRQEIREISESIRISASRLHNLIQKFLLYTKLDLATHDPDDFHLWYSPVTEKSDTLITTLARQIAKQYQRP EDLKLELCAAKVAISEKWLVTLVQEIVDNAFKFSEHTSQTKKRILLKSRINGNVWQLAIKDHGRGMSPEQIRALGAYMQF DRQQYEQQGSGLGLAIAERIAKIYNGTVTIKSTVGTGTTVIVTFPTATSEQIPTENRLS >Mature_378_residues ATILVIEDELNVLSILRDILTAEGFAVITATDGQIGLETAYAQLPDLIICDVNLPRLDGYGVLKALHSNSTTTTIPFIFL SARASRSAQRQGMDLGADDYIPKPFTRQELLNAIRGRLSRRQGLAQHSAQQLEQLRRNLTMALPHELRTPLQGIMTSAEL LGECWETLDRQEIREISESIRISASRLHNLIQKFLLYTKLDLATHDPDDFHLWYSPVTEKSDTLITTLARQIAKQYQRPE DLKLELCAAKVAISEKWLVTLVQEIVDNAFKFSEHTSQTKKRILLKSRINGNVWQLAIKDHGRGMSPEQIRALGAYMQFD RQQYEQQGSGLGLAIAERIAKIYNGTVTIKSTVGTGTTVIVTFPTATSEQIPTENRLS
Specific function: Member of the two-component regulatory system dltS/dltR. Regulates the expression of the dlt operon [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790860, Length=130, Percent_Identity=34.6153846153846, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1786599, Length=133, Percent_Identity=33.0827067669173, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI2367329, Length=121, Percent_Identity=41.3223140495868, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786911, Length=130, Percent_Identity=40, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082012, Length=136, Percent_Identity=36.0294117647059, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1790863, Length=129, Percent_Identity=34.8837209302326, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786784, Length=138, Percent_Identity=34.0579710144928, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789809, Length=118, Percent_Identity=33.8983050847458, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786600, Length=240, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081816, Length=269, Percent_Identity=23.4200743494424, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789402, Length=144, Percent_Identity=31.25, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786912, Length=246, Percent_Identity=27.2357723577236, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787229, Length=118, Percent_Identity=33.0508474576271, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790437, Length=103, Percent_Identity=32.0388349514563, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1790552, Length=120, Percent_Identity=32.5, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1787375, Length=123, Percent_Identity=30.0813008130081, Blast_Score=62, Evalue=6e-11, Organism=Escherichia coli, GI1788394, Length=118, Percent_Identity=31.3559322033898, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 42511; Mature: 42380
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATILVIEDELNVLSILRDILTAEGFAVITATDGQIGLETAYAQLPDLIICDVNLPRLDG CEEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCC YGVLKALHSNSTTTTIPFIFLSARASRSAQRQGMDLGADDYIPKPFTRQELLNAIRGRLS HHHHHHHHCCCCCEEEHHHEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RRQGLAQHSAQQLEQLRRNLTMALPHELRTPLQGIMTSAELLGECWETLDRQEIREISES HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH IRISASRLHNLIQKFLLYTKLDLATHDPDDFHLWYSPVTEKSDTLITTLARQIAKQYQRP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC EDLKLELCAAKVAISEKWLVTLVQEIVDNAFKFSEHTSQTKKRILLKSRINGNVWQLAIK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE DHGRGMSPEQIRALGAYMQFDRQQYEQQGSGLGLAIAERIAKIYNGTVTIKSTVGTGTTV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEE IVTFPTATSEQIPTENRLS EEEECCCCCCCCCCCCCCC >Mature Secondary Structure ATILVIEDELNVLSILRDILTAEGFAVITATDGQIGLETAYAQLPDLIICDVNLPRLDG EEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCC YGVLKALHSNSTTTTIPFIFLSARASRSAQRQGMDLGADDYIPKPFTRQELLNAIRGRLS HHHHHHHHCCCCCEEEHHHEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RRQGLAQHSAQQLEQLRRNLTMALPHELRTPLQGIMTSAELLGECWETLDRQEIREISES HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH IRISASRLHNLIQKFLLYTKLDLATHDPDDFHLWYSPVTEKSDTLITTLARQIAKQYQRP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC EDLKLELCAAKVAISEKWLVTLVQEIVDNAFKFSEHTSQTKKRILLKSRINGNVWQLAIK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE DHGRGMSPEQIRALGAYMQFDRQQYEQQGSGLGLAIAERIAKIYNGTVTIKSTVGTGTTV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEE IVTFPTATSEQIPTENRLS EEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11591677; 12354221 [H]