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The map label for this gene is zam [H]

Identifier: 170078152

GI number: 170078152

Start: 1627809

End: 1630082

Strand: Reverse

Name: zam [H]

Synonym: SYNPCC7002_A1543

Alternate gene names: 170078152

Gene position: 1630082-1627809 (Counterclockwise)

Preceding gene: 170078154

Following gene: 170078147

Centisome position: 54.19

GC content: 50.44

Gene sequence:

>2274_bases
ATGGATTTTTCAATCGCCACACTGCTGTCTTTCTTTACAGATGACAAATTGGTTGCCGGTAAATTCCTCGAAAAGAAATT
AGAGTGTCGCTCTGAGGAAGATACAGAACAACTCCAGATTATTCTTGATGCCCTGGAGCGCTCGAATATTTTGGTGAAGG
AACGGGGCAAATATCGCCGGGTGCCGGAAGCGGATGTGGTCGAGGCAAAGCTACGGTGTTCGAGTAAGGGTTTCTGTTTT
GCGATCCAGGATTCTGAGGATGCTGATGATATTTACATTCGTGAAAGTTATCTCAGCAATGCTTGGAATGGCGATCGCGT
TTTGGTCAAGATTATTAAAGAAGGAACGCGGCGGCGATCGCCAGAGGGAGTAGTCCGTTTAATTTTAGAACGGGCCAATC
CTTCCCTCCTAGCGCGGGTGGTCCAAAAAGATGAAGGCTTCCGAGCAGTGCCCCTCGACGATCGCCTCCTGTTTGAACTT
GAACTCCAGGACGAAACAGATCGGCTCCAGCAGGCCATTGATCACCTCGTCCATGTTTCGGTGGTGCAATATCCCATCGC
CCAGTACCTCCCCCAGGGGTCTGTCACCAAGGTGTTGGGGAGTGATGCCGAGGCCGCCGCTGACACCGATATTGTCTGTT
GTAAACATGATTTACTGCGCCAATTTCCCGAGGAGGTTTTGGCTGCCGTTAAGGACATTCCCACAAAACTAACAAAAAAA
ATGCTCGCCAAGCGGCGGGATTTTCGCGACCAATTGACCATCACCATCGAGGATGAAATTCACCTCACCCCAGAAAACCA
AGCCTTCATTGAAAATGCATTTACACTGCAAAAAACCGAGGCTGGACAGTGGCAACTGGGCATCCACTTAGCGGACGTGG
CAGAATTTGTCCCGGCCCAGGGAGTCCTGGATCGGTGGGCGAAAAAACATGGTACGGCGGTGTTTCTCGGTCAAATGACC
ATTCCACTATTTCCACCAGAATTTAAGGAAAAGGTGGAGCTTCGTCCTGGGGGCGATCGCCTGACGATGTCCATTCTCCT
CACCTTTGATGATCAGGGGAACGTGGCAGAATTTGAAATTACCCCCAGTGTGATCCGCGTTGACCAGAGCCTAAGTTACC
AAAAGATTCAGCACCTCCTCAGTAGTGGGGAAACCGCAGAGGCTGAACTGGCCGATGTCGCAACTCTGCTGAATGATTTA
ATTTTTAACCTCAGTCCTTTAGTTAAAGCCCAGCGCCTGCAACGGGGCGGTTTCCAGATTTCTCTACCCGAAGTAACTTC
TGCTTTTAAAGATGAAGGGCGTTTCGGGACGATGATTGTTTCACCGAGCTTGCCGGTGCGGTCTCTCTTGGCAGAGGTGA
TGATCCTAGCGGGTCGAGCCGTAGCCCAACATATGCTGGCCCTAGAACTACCAGCCATCTATTGCTACCAAGCGAATCCT
GATTTTGAGAGCCTTGAAAATCTCATTAAGTTGGGCAACAATCTAAACCTCAAGCTCAAGCTCGAATCGGAAGAAGAGCT
GTTACCCCACGATTATCAGCACTTTATCCAAGAGTTCAGCCAGACGGACATGACAAAGATCCTGAACTATCTACTTCAGG
AAACCCTCGATGTTCCCCGCTATGGTGCCCATCCCCACCCCCATTTTGGCTTGGCCTACCGGGACGGTTACAGTCGCGTG
TGTGCGCCGGGACAACGCTATGGTGACTTGGTGATGCAGCGCATTTTAAAACTCATTTTCTCTGAGGGGCGCGATCGCCG
TTCGAGTCGCGTCAAGGTCGGGGTTAACCTCGGCAGCAGCACTTGTCATAACCAGGTGAACTGGAAAGTGCTACCAACGC
CGATCCAAACGGAATTAGAAGAAACCATTGCCAGCCTAATTTTGCAACTCAACGATCAAGAAAAGGTGGCCGATGACGCC
GAAAAAGATCTCCAGGGACTCCAAAAGGCTGAAAAGATGAAGGCCCACACGGGGCACACTTTTAAGGGATTGATCACCGG
GGTGCAGTCCTATGGTTTCTTTGTGGAAATCGAGGATCTGCTCGTGGAAGGTCTTGTCCATGTCAGCTCCCTCAAGGATG
ACTGGTACGAATATCGCGCCCGACACAGTTGTCTAGTGGGTCGGAAAAATCGTACTGCCTATCGCCTCGGCAATACCGTC
GATGTGGAAGTGAAGAGTGTCGATTATTATCGGCAACAGATTGACCTGGCGATCGCCAAAAATACCAATTCAGACCCAGA
TGGCGCGGCTGCGGAAAATTGGGAAGAAGAATAA

Upstream 100 bases:

>100_bases
TGTCTAGGTTTAATGATAGCGACAAACAACAGGCTAATGATGCTTTTCTGGTGGACTGTTGTCGTTTCACTTTACTTTCT
AACGAAAAGGATAGTTTTGC

Downstream 100 bases:

>100_bases
TCACCCGTCTATGACTCAGCTGATGGGGGAAGCGTTGCATGCTTCCCTCTTTTTTTGTGACGATACGGCCCCCGGTGGCC
TAGGCCTAGGGCATCCACTC

Product: exoribonuclease

Products: tetrahydrofolate; N-formylmethionyl-tRNA(fMet)

Alternate protein names: NA

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MDFSIATLLSFFTDDKLVAGKFLEKKLECRSEEDTEQLQIILDALERSNILVKERGKYRRVPEADVVEAKLRCSSKGFCF
AIQDSEDADDIYIRESYLSNAWNGDRVLVKIIKEGTRRRSPEGVVRLILERANPSLLARVVQKDEGFRAVPLDDRLLFEL
ELQDETDRLQQAIDHLVHVSVVQYPIAQYLPQGSVTKVLGSDAEAAADTDIVCCKHDLLRQFPEEVLAAVKDIPTKLTKK
MLAKRRDFRDQLTITIEDEIHLTPENQAFIENAFTLQKTEAGQWQLGIHLADVAEFVPAQGVLDRWAKKHGTAVFLGQMT
IPLFPPEFKEKVELRPGGDRLTMSILLTFDDQGNVAEFEITPSVIRVDQSLSYQKIQHLLSSGETAEAELADVATLLNDL
IFNLSPLVKAQRLQRGGFQISLPEVTSAFKDEGRFGTMIVSPSLPVRSLLAEVMILAGRAVAQHMLALELPAIYCYQANP
DFESLENLIKLGNNLNLKLKLESEEELLPHDYQHFIQEFSQTDMTKILNYLLQETLDVPRYGAHPHPHFGLAYRDGYSRV
CAPGQRYGDLVMQRILKLIFSEGRDRRSSRVKVGVNLGSSTCHNQVNWKVLPTPIQTELEETIASLILQLNDQEKVADDA
EKDLQGLQKAEKMKAHTGHTFKGLITGVQSYGFFVEIEDLLVEGLVHVSSLKDDWYEYRARHSCLVGRKNRTAYRLGNTV
DVEVKSVDYYRQQIDLAIAKNTNSDPDGAAAENWEEE

Sequences:

>Translated_757_residues
MDFSIATLLSFFTDDKLVAGKFLEKKLECRSEEDTEQLQIILDALERSNILVKERGKYRRVPEADVVEAKLRCSSKGFCF
AIQDSEDADDIYIRESYLSNAWNGDRVLVKIIKEGTRRRSPEGVVRLILERANPSLLARVVQKDEGFRAVPLDDRLLFEL
ELQDETDRLQQAIDHLVHVSVVQYPIAQYLPQGSVTKVLGSDAEAAADTDIVCCKHDLLRQFPEEVLAAVKDIPTKLTKK
MLAKRRDFRDQLTITIEDEIHLTPENQAFIENAFTLQKTEAGQWQLGIHLADVAEFVPAQGVLDRWAKKHGTAVFLGQMT
IPLFPPEFKEKVELRPGGDRLTMSILLTFDDQGNVAEFEITPSVIRVDQSLSYQKIQHLLSSGETAEAELADVATLLNDL
IFNLSPLVKAQRLQRGGFQISLPEVTSAFKDEGRFGTMIVSPSLPVRSLLAEVMILAGRAVAQHMLALELPAIYCYQANP
DFESLENLIKLGNNLNLKLKLESEEELLPHDYQHFIQEFSQTDMTKILNYLLQETLDVPRYGAHPHPHFGLAYRDGYSRV
CAPGQRYGDLVMQRILKLIFSEGRDRRSSRVKVGVNLGSSTCHNQVNWKVLPTPIQTELEETIASLILQLNDQEKVADDA
EKDLQGLQKAEKMKAHTGHTFKGLITGVQSYGFFVEIEDLLVEGLVHVSSLKDDWYEYRARHSCLVGRKNRTAYRLGNTV
DVEVKSVDYYRQQIDLAIAKNTNSDPDGAAAENWEEE
>Mature_757_residues
MDFSIATLLSFFTDDKLVAGKFLEKKLECRSEEDTEQLQIILDALERSNILVKERGKYRRVPEADVVEAKLRCSSKGFCF
AIQDSEDADDIYIRESYLSNAWNGDRVLVKIIKEGTRRRSPEGVVRLILERANPSLLARVVQKDEGFRAVPLDDRLLFEL
ELQDETDRLQQAIDHLVHVSVVQYPIAQYLPQGSVTKVLGSDAEAAADTDIVCCKHDLLRQFPEEVLAAVKDIPTKLTKK
MLAKRRDFRDQLTITIEDEIHLTPENQAFIENAFTLQKTEAGQWQLGIHLADVAEFVPAQGVLDRWAKKHGTAVFLGQMT
IPLFPPEFKEKVELRPGGDRLTMSILLTFDDQGNVAEFEITPSVIRVDQSLSYQKIQHLLSSGETAEAELADVATLLNDL
IFNLSPLVKAQRLQRGGFQISLPEVTSAFKDEGRFGTMIVSPSLPVRSLLAEVMILAGRAVAQHMLALELPAIYCYQANP
DFESLENLIKLGNNLNLKLKLESEEELLPHDYQHFIQEFSQTDMTKILNYLLQETLDVPRYGAHPHPHFGLAYRDGYSRV
CAPGQRYGDLVMQRILKLIFSEGRDRRSSRVKVGVNLGSSTCHNQVNWKVLPTPIQTELEETIASLILQLNDQEKVADDA
EKDLQGLQKAEKMKAHTGHTFKGLITGVQSYGFFVEIEDLLVEGLVHVSSLKDDWYEYRARHSCLVGRKNRTAYRLGNTV
DVEVKSVDYYRQQIDLAIAKNTNSDPDGAAAENWEEE

Specific function: Not known; control resistance to the carbonic anhydrase inhibitor acetazolamide [H]

COG id: COG0557

COG function: function code K; Exoribonuclease R

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI190014623, Length=414, Percent_Identity=24.8792270531401, Blast_Score=114, Evalue=5e-25,
Organism=Homo sapiens, GI190014625, Length=414, Percent_Identity=24.8792270531401, Blast_Score=113, Evalue=6e-25,
Organism=Homo sapiens, GI134288890, Length=564, Percent_Identity=22.6950354609929, Blast_Score=96, Evalue=2e-19,
Organism=Homo sapiens, GI156105695, Length=323, Percent_Identity=25.6965944272446, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI19115966, Length=548, Percent_Identity=22.2627737226277, Blast_Score=80, Evalue=8e-15,
Organism=Homo sapiens, GI219521928, Length=548, Percent_Identity=22.2627737226277, Blast_Score=80, Evalue=9e-15,
Organism=Homo sapiens, GI156105693, Length=323, Percent_Identity=25.6965944272446, Blast_Score=80, Evalue=1e-14,
Organism=Escherichia coli, GI87082383, Length=719, Percent_Identity=25.8692628650904, Blast_Score=235, Evalue=9e-63,
Organism=Caenorhabditis elegans, GI17553506, Length=444, Percent_Identity=23.4234234234234, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI212645896, Length=430, Percent_Identity=24.1860465116279, Blast_Score=89, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6324552, Length=459, Percent_Identity=27.8867102396514, Blast_Score=134, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6320499, Length=237, Percent_Identity=26.5822784810127, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649634, Length=456, Percent_Identity=23.2456140350877, Blast_Score=109, Evalue=6e-24,
Organism=Drosophila melanogaster, GI19922976, Length=381, Percent_Identity=20.4724409448819, Blast_Score=70, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24654597, Length=381, Percent_Identity=20.4724409448819, Blast_Score=70, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24654592, Length=381, Percent_Identity=20.4724409448819, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011129
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR013223
- InterPro:   IPR001900
- InterPro:   IPR022966
- InterPro:   IPR011805 [H]

Pfam domain/function: PF08206 OB_RNB; PF00773 RNB; PF00575 S1 [H]

EC number: 2.1.2.9

Molecular weight: Translated: 85537; Mature: 85537

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSIATLLSFFTDDKLVAGKFLEKKLECRSEEDTEQLQIILDALERSNILVKERGKYRR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCC
VPEADVVEAKLRCSSKGFCFAIQDSEDADDIYIRESYLSNAWNGDRVLVKIIKEGTRRRS
CCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHCCCC
PEGVVRLILERANPSLLARVVQKDEGFRAVPLDDRLLFELELQDETDRLQQAIDHLVHVS
HHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
VVQYPIAQYLPQGSVTKVLGSDAEAAADTDIVCCKHDLLRQFPEEVLAAVKDIPTKLTKK
HHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLAKRRDFRDQLTITIEDEIHLTPENQAFIENAFTLQKTEAGQWQLGIHLADVAEFVPAQ
HHHHHHCCCCEEEEEEECCEEECCCCHHHHHHHHEEEECCCCCEEEEEEHHHHHHHCCCH
GVLDRWAKKHGTAVFLGQMTIPLFPPEFKEKVELRPGGDRLTMSILLTFDDQGNVAEFEI
HHHHHHHHHCCCEEEEECEECCCCCCCHHHCEECCCCCCEEEEEEEEEECCCCCEEEEEE
TPSVIRVDQSLSYQKIQHLLSSGETAEAELADVATLLNDLIFNLSPLVKAQRLQRGGFQI
CHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE
SLPEVTSAFKDEGRFGTMIVSPSLPVRSLLAEVMILAGRAVAQHMLALELPAIYCYQANP
ECHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
DFESLENLIKLGNNLNLKLKLESEEELLPHDYQHFIQEFSQTDMTKILNYLLQETLDVPR
CHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
YGAHPHPHFGLAYRDGYSRVCAPGQRYGDLVMQRILKLIFSEGRDRRSSRVKVGVNLGSS
CCCCCCCCCCEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCH
TCHNQVNWKVLPTPIQTELEETIASLILQLNDQEKVADDAEKDLQGLQKAEKMKAHTGHT
HHCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FKGLITGVQSYGFFVEIEDLLVEGLVHVSSLKDDWYEYRARHSCLVGRKNRTAYRLGNTV
HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEE
DVEVKSVDYYRQQIDLAIAKNTNSDPDGAAAENWEEE
EEEEHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFSIATLLSFFTDDKLVAGKFLEKKLECRSEEDTEQLQIILDALERSNILVKERGKYRR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCC
VPEADVVEAKLRCSSKGFCFAIQDSEDADDIYIRESYLSNAWNGDRVLVKIIKEGTRRRS
CCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHHCCCC
PEGVVRLILERANPSLLARVVQKDEGFRAVPLDDRLLFELELQDETDRLQQAIDHLVHVS
HHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
VVQYPIAQYLPQGSVTKVLGSDAEAAADTDIVCCKHDLLRQFPEEVLAAVKDIPTKLTKK
HHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLAKRRDFRDQLTITIEDEIHLTPENQAFIENAFTLQKTEAGQWQLGIHLADVAEFVPAQ
HHHHHHCCCCEEEEEEECCEEECCCCHHHHHHHHEEEECCCCCEEEEEEHHHHHHHCCCH
GVLDRWAKKHGTAVFLGQMTIPLFPPEFKEKVELRPGGDRLTMSILLTFDDQGNVAEFEI
HHHHHHHHHCCCEEEEECEECCCCCCCHHHCEECCCCCCEEEEEEEEEECCCCCEEEEEE
TPSVIRVDQSLSYQKIQHLLSSGETAEAELADVATLLNDLIFNLSPLVKAQRLQRGGFQI
CHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE
SLPEVTSAFKDEGRFGTMIVSPSLPVRSLLAEVMILAGRAVAQHMLALELPAIYCYQANP
ECHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
DFESLENLIKLGNNLNLKLKLESEEELLPHDYQHFIQEFSQTDMTKILNYLLQETLDVPR
CHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
YGAHPHPHFGLAYRDGYSRVCAPGQRYGDLVMQRILKLIFSEGRDRRSSRVKVGVNLGSS
CCCCCCCCCCEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCH
TCHNQVNWKVLPTPIQTELEETIASLILQLNDQEKVADDAEKDLQGLQKAEKMKAHTGHT
HHCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FKGLITGVQSYGFFVEIEDLLVEGLVHVSSLKDDWYEYRARHSCLVGRKNRTAYRLGNTV
HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEE
DVEVKSVDYYRQQIDLAIAKNTNSDPDGAAAENWEEE
EEEEHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 10-formyltetrahydrofolate; L-methionyl-tRNA(fMet); H2O

Specific reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA(fMet) + H2O = tetrahydrofolate + N-formylmethionyl-tRNA(fMet)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7727754; 8905231 [H]