Click here to switch to the map view.

The map label for this gene is 170078139

Identifier: 170078139

GI number: 170078139

Start: 1613467

End: 1614030

Strand: Reverse

Name: 170078139

Synonym: SYNPCC7002_A1530

Alternate gene names: NA

Gene position: 1614030-1613467 (Counterclockwise)

Preceding gene: 170078141

Following gene: 170078137

Centisome position: 53.66

GC content: 44.86

Gene sequence:

>564_bases
ATGATTGCTTTACCCTCTAGTTTTTCCCCCCAGGCATACCTCGAACTTGAGTCCGAAAGCACAATTCGCCATGAGTATCG
CCAGGGATTAGTTTATGCGATGGCCAGTGGTAGTGATGACCATAGTCGCATTGCCATTAATTTTTTAACGGCCCTTAATT
TGCATCTCCGGGATGGCCCATGCCGATTTTTTGCGGGGGACGTAAAAGTTAATTATCGAGACCAGTTTTTTTATTATCCT
GATGCTTTTGTCACTTGCGACCCCAGGGATCAACAAAATCGCTATGTAAAACAATTTCCCAAGTTAATCCTTGAGGTTTT
ATCTCCAGCCACAGAGAACTTTGACCGCACAGAAAAATTCCAAGATTATCAACGGATTACGACCTTAGAAGAGTATGTTT
TGATTTCCCAAACGCAACAGGAAGTAGAGGTCTGGCGGCGATCGCCCCAGGATTGGACGAATCAAATTTACCGGACGATT
GATCCGGTCAAGCTCACCAGCATCAACCTTGAAATGCCCATATCAGAACTGTATCGGGGCACCAGTCTCGAAAGCTGCAT
TTAA

Upstream 100 bases:

>100_bases
CTATTAAGATTACTAAAATCTAGACCCATACCTTCCGTGCTAAACTATGCTCCCAAATCAACCAGGGTACAATTAAAGCA
CTGATTTTCAGTCTTTTGGC

Downstream 100 bases:

>100_bases
GATGCCGTCGGATTTTTGGCGCGGGCTTCGAGATCGTCAAGGGTTTGCAAAACCAACCGCTTTGCTTCTAGTTGCCAGCC
CCAGCGTTGAATTTGAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MIALPSSFSPQAYLELESESTIRHEYRQGLVYAMASGSDDHSRIAINFLTALNLHLRDGPCRFFAGDVKVNYRDQFFYYP
DAFVTCDPRDQQNRYVKQFPKLILEVLSPATENFDRTEKFQDYQRITTLEEYVLISQTQQEVEVWRRSPQDWTNQIYRTI
DPVKLTSINLEMPISELYRGTSLESCI

Sequences:

>Translated_187_residues
MIALPSSFSPQAYLELESESTIRHEYRQGLVYAMASGSDDHSRIAINFLTALNLHLRDGPCRFFAGDVKVNYRDQFFYYP
DAFVTCDPRDQQNRYVKQFPKLILEVLSPATENFDRTEKFQDYQRITTLEEYVLISQTQQEVEVWRRSPQDWTNQIYRTI
DPVKLTSINLEMPISELYRGTSLESCI
>Mature_187_residues
MIALPSSFSPQAYLELESESTIRHEYRQGLVYAMASGSDDHSRIAINFLTALNLHLRDGPCRFFAGDVKVNYRDQFFYYP
DAFVTCDPRDQQNRYVKQFPKLILEVLSPATENFDRTEKFQDYQRITTLEEYVLISQTQQEVEVWRRSPQDWTNQIYRTI
DPVKLTSINLEMPISELYRGTSLESCI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll1609 and sll0925 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008538
- InterPro:   IPR012296
- InterPro:   IPR011335 [H]

Pfam domain/function: PF05685 DUF820 [H]

EC number: NA

Molecular weight: Translated: 21941; Mature: 21941

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALPSSFSPQAYLELESESTIRHEYRQGLVYAMASGSDDHSRIAINFLTALNLHLRDGP
CCCCCCCCCCCEEEEECCCHHHHHHHHCCEEEEEECCCCCCCEEEEEEEEHEEEEECCCC
CRFFAGDVKVNYRDQFFYYPDAFVTCDPRDQQNRYVKQFPKLILEVLSPATENFDRTEKF
CEEEECCEEEEEECEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QDYQRITTLEEYVLISQTQQEVEVWRRSPQDWTNQIYRTIDPVKLTSINLEMPISELYRG
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEECCHHHHHCC
TSLESCI
CCHHHCC
>Mature Secondary Structure
MIALPSSFSPQAYLELESESTIRHEYRQGLVYAMASGSDDHSRIAINFLTALNLHLRDGP
CCCCCCCCCCCEEEEECCCHHHHHHHHCCEEEEEECCCCCCCEEEEEEEEHEEEEECCCC
CRFFAGDVKVNYRDQFFYYPDAFVTCDPRDQQNRYVKQFPKLILEVLSPATENFDRTEKF
CEEEECCEEEEEECEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QDYQRITTLEEYVLISQTQQEVEVWRRSPQDWTNQIYRTIDPVKLTSINLEMPISELYRG
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEECCHHHHHCC
TSLESCI
CCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]