| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is glgA [H]
Identifier: 170078141
GI number: 170078141
Start: 1615838
End: 1617274
Strand: Reverse
Name: glgA [H]
Synonym: SYNPCC7002_A1532
Alternate gene names: 170078141
Gene position: 1617274-1615838 (Counterclockwise)
Preceding gene: 170078142
Following gene: 170078139
Centisome position: 53.76
GC content: 49.55
Gene sequence:
>1437_bases ATGCGTATTTTGTTTGTTTCTGCCGAGGCTGCTCCCATCGCTAAAGCTGGAGGCATGGGAGATGTGGTGGGATCACTGCC TAAAGTTTTACGGCAGTTAGGACATGACGCGAGAATTTTCTTACCCTATTACGGCTTTCTCAACGACAAACTCGACATCC CTGCAGAACCCGTTTGGTGGGGCAGTGCGATGTTCAATACTTTTGCCGTTTATGAAACTGTGTTGCCCAACACCGATGTC CCCCTTTATCTGTTTGGCCATCCCGCCTTTGATGGACGGCATATTTATGGTGGGCAGGATGAATTTTGGCGCTTTACCTT TTTTGCCAATGGGGCCGCTGAATTTATGTGGAACCACTGGAAACCCCAGATCGCCCACTGTCACGACTGGCACACGGGCA TGATTCCGGTATGGATGCACCAATCGCCGGATATCAGTACGGTGTTTACGATCCACAACTTAGCCTACCAAGGGCCTTGG CGGGGTTTCCTGGAGCGCAATACTTGGTGTCCCTGGTATATGGATGGTGATAACGTGATGGCTTCGGCGCTGATGTTTGC CGATCAGGTGAACACCGTATCTCCCACCTATGCCCAACAAATCCAAACCAAAGTCTATGGTGAAAAATTAGAGGGTTTGT TGTCTTGGATCAGTGGCAAAAGTCGCGGCATCGTGAATGGTATTGACGTAGAACTTTATAATCCTTCTAACGATCAAGCC CTGGTGAAGCAATTTTCTACGACTAATCTTGAGGATCGGGCCGCCAACAAAGTGATTATCCAAGAAGAAACGGGGCTAGA GGTCAACTCCAAGGCTTTTTTGATGGCGATGGTCACCCGCTTAGTGGAACAAAAGGGCATTGATCTGCTGCTAAATATCC TGGAGCAGTTTATGGCATACACTGACGCCCAGCTCATTATCCTCGGCACTGGCGATCGCCACTACGAAACCCAACTCTGG CAGACTGCCTACCGCTTTAAGGGGCGGATGTCCGTGCAACTGCTCTATAATGATGCCCTCTCCCGCCGGATTTACGCTGG ATCCGATGTCTTTTTGATGCCGTCACGCTTTGAGCCCTGTGGCATTAGTCAAATGATGGCGATGCGCTACGGTTCTGTAC CGATTGTGCGGCGCACCGGGGGTTTGGTGGATACGGTCTCTTTCCATGATCCGATTCACCAAACCGGGACAGGCTTTAGT TTTGACCGCTACGAACCGCTGGATATGTACACCTGCATGGTGCGGGCTTGGGAAAGTTTCCGCTACAAAAAAGACTGGGC TGAACTACAAAGACGAGGCATGAGCCATGACTTTAGTTGGTACAAATCTGCCGGGGAATATCTCAAGATGTACCGCCAAA GCATTAAAGAAGCTCCGGAATTAACGACCGATGAAGCCGAAAAAATCACCTATTTAGTGAAAAAACACGCCATTTAA
Upstream 100 bases:
>100_bases AATTTCTTAGGGACAAAATTCCCGGATAGTATTTATTCTTGGGATCCCTCAAAGAATGATACGCTCTAACAGAACATCAA AAATTGACGAGAAAATTCTG
Downstream 100 bases:
>100_bases AAATGACTTTGAAAACCTTGGAATAAATCTTTCAGCCAAGTCATCGCTTGGTTACGGTTTGTTTTGACTTCCAATAGCCG TACTCCCCTGGGTGGCAAGA
Product: glycogen synthase
Products: NA
Alternate protein names: Starch [bacterial glycogen] synthase 1 [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MRILFVSAEAAPIAKAGGMGDVVGSLPKVLRQLGHDARIFLPYYGFLNDKLDIPAEPVWWGSAMFNTFAVYETVLPNTDV PLYLFGHPAFDGRHIYGGQDEFWRFTFFANGAAEFMWNHWKPQIAHCHDWHTGMIPVWMHQSPDISTVFTIHNLAYQGPW RGFLERNTWCPWYMDGDNVMASALMFADQVNTVSPTYAQQIQTKVYGEKLEGLLSWISGKSRGIVNGIDVELYNPSNDQA LVKQFSTTNLEDRAANKVIIQEETGLEVNSKAFLMAMVTRLVEQKGIDLLLNILEQFMAYTDAQLIILGTGDRHYETQLW QTAYRFKGRMSVQLLYNDALSRRIYAGSDVFLMPSRFEPCGISQMMAMRYGSVPIVRRTGGLVDTVSFHDPIHQTGTGFS FDRYEPLDMYTCMVRAWESFRYKKDWAELQRRGMSHDFSWYKSAGEYLKMYRQSIKEAPELTTDEAEKITYLVKKHAI
Sequences:
>Translated_478_residues MRILFVSAEAAPIAKAGGMGDVVGSLPKVLRQLGHDARIFLPYYGFLNDKLDIPAEPVWWGSAMFNTFAVYETVLPNTDV PLYLFGHPAFDGRHIYGGQDEFWRFTFFANGAAEFMWNHWKPQIAHCHDWHTGMIPVWMHQSPDISTVFTIHNLAYQGPW RGFLERNTWCPWYMDGDNVMASALMFADQVNTVSPTYAQQIQTKVYGEKLEGLLSWISGKSRGIVNGIDVELYNPSNDQA LVKQFSTTNLEDRAANKVIIQEETGLEVNSKAFLMAMVTRLVEQKGIDLLLNILEQFMAYTDAQLIILGTGDRHYETQLW QTAYRFKGRMSVQLLYNDALSRRIYAGSDVFLMPSRFEPCGISQMMAMRYGSVPIVRRTGGLVDTVSFHDPIHQTGTGFS FDRYEPLDMYTCMVRAWESFRYKKDWAELQRRGMSHDFSWYKSAGEYLKMYRQSIKEAPELTTDEAEKITYLVKKHAI >Mature_478_residues MRILFVSAEAAPIAKAGGMGDVVGSLPKVLRQLGHDARIFLPYYGFLNDKLDIPAEPVWWGSAMFNTFAVYETVLPNTDV PLYLFGHPAFDGRHIYGGQDEFWRFTFFANGAAEFMWNHWKPQIAHCHDWHTGMIPVWMHQSPDISTVFTIHNLAYQGPW RGFLERNTWCPWYMDGDNVMASALMFADQVNTVSPTYAQQIQTKVYGEKLEGLLSWISGKSRGIVNGIDVELYNPSNDQA LVKQFSTTNLEDRAANKVIIQEETGLEVNSKAFLMAMVTRLVEQKGIDLLLNILEQFMAYTDAQLIILGTGDRHYETQLW QTAYRFKGRMSVQLLYNDALSRRIYAGSDVFLMPSRFEPCGISQMMAMRYGSVPIVRRTGGLVDTVSFHDPIHQTGTGFS FDRYEPLDMYTCMVRAWESFRYKKDWAELQRRGMSHDFSWYKSAGEYLKMYRQSIKEAPELTTDEAEKITYLVKKHAI
Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]
COG id: COG0297
COG function: function code G; Glycogen synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789836, Length=479, Percent_Identity=33.4029227557411, Blast_Score=265, Evalue=7e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011835 - InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.21 [H]
Molecular weight: Translated: 54860; Mature: 54860
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILFVSAEAAPIAKAGGMGDVVGSLPKVLRQLGHDARIFLPYYGFLNDKLDIPAEPVWW CEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC GSAMFNTFAVYETVLPNTDVPLYLFGHPAFDGRHIYGGQDEFWRFTFFANGAAEFMWNHW CHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCEEEEEEEECCHHHHHHCCC KPQIAHCHDWHTGMIPVWMHQSPDISTVFTIHNLAYQGPWRGFLERNTWCPWYMDGDNVM CCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHCCCCHHHHCCCCCCCEEECCCHHH ASALMFADQVNTVSPTYAQQIQTKVYGEKLEGLLSWISGKSRGIVNGIDVELYNPSNDQA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEEEECCCCCHH LVKQFSTTNLEDRAANKVIIQEETGLEVNSKAFLMAMVTRLVEQKGIDLLLNILEQFMAY HHHHHHCCCCCHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TDAQLIILGTGDRHYETQLWQTAYRFKGRMSVQLLYNDALSRRIYAGSDVFLMPSRFEPC CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHCEEECCCCEEEECCCCCCC GISQMMAMRYGSVPIVRRTGGLVDTVSFHDPIHQTGTGFSFDRYEPLDMYTCMVRAWESF CHHHHHHHHCCCCCEEECCCCCEEEECCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHH RYKKDWAELQRRGMSHDFSWYKSAGEYLKMYRQSIKEAPELTTDEAEKITYLVKKHAI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRILFVSAEAAPIAKAGGMGDVVGSLPKVLRQLGHDARIFLPYYGFLNDKLDIPAEPVWW CEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC GSAMFNTFAVYETVLPNTDVPLYLFGHPAFDGRHIYGGQDEFWRFTFFANGAAEFMWNHW CHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCEEEEEEEECCHHHHHHCCC KPQIAHCHDWHTGMIPVWMHQSPDISTVFTIHNLAYQGPWRGFLERNTWCPWYMDGDNVM CCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHCCCCHHHHCCCCCCCEEECCCHHH ASALMFADQVNTVSPTYAQQIQTKVYGEKLEGLLSWISGKSRGIVNGIDVELYNPSNDQA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEEEECCCCCHH LVKQFSTTNLEDRAANKVIIQEETGLEVNSKAFLMAMVTRLVEQKGIDLLLNILEQFMAY HHHHHHCCCCCHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TDAQLIILGTGDRHYETQLWQTAYRFKGRMSVQLLYNDALSRRIYAGSDVFLMPSRFEPC CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHCEEECCCCEEEECCCCCCC GISQMMAMRYGSVPIVRRTGGLVDTVSFHDPIHQTGTGFSFDRYEPLDMYTCMVRAWESF CHHHHHHHHCCCCCEEECCCCCEEEECCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHH RYKKDWAELQRRGMSHDFSWYKSAGEYLKMYRQSIKEAPELTTDEAEKITYLVKKHAI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]