| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078138
Identifier: 170078138
GI number: 170078138
Start: 1613063
End: 1613470
Strand: Direct
Name: 170078138
Synonym: SYNPCC7002_A1529
Alternate gene names: NA
Gene position: 1613063-1613470 (Clockwise)
Preceding gene: 170078136
Following gene: 170078140
Centisome position: 53.62
GC content: 49.75
Gene sequence:
>408_bases ATGGCTCAGCTAGAGAAATTGATTCAGATGGCGGAAAATGAACTGACAGAATACAGTACCGACGCCCGCAAGATTGAAAA GTTGCGCCGCAAATTTGCGTTTATGTTGAATCCTCGACAACAGCAGCAAATTAAGGATGAACTTTTGGCCCAGATGCCCC AGGGATTTTTCGGAAAAATGGTGTTGGAAAATCGACAGACAGTCGCTTTACCTTTTTGGGGCATTGCGGGTTTGGGTTTA CTGTTCGGCATTTCCCTCCAGCAGCCCCTTGATTTCCTCGCTCCGGCGATCGCCCTGCCCGCTGCGATTCAAATTCAACG CTGGGGCTGGCAACTAGAAGCAAAGCGGTTGGTTTTGCAAACCCTTGACGATCTCGAAGCCCGCGCCAAAAATCCGACGG CATCTTAA
Upstream 100 bases:
>100_bases AGCTGAATAGTAATGGCGATCGCCTTTTGGGGGCCGGGAAGAAAATCCCAGGGAATGCCACAATAAACAGAGATTTTTAA AGAGAGAGGCCCAAAGTACC
Downstream 100 bases:
>100_bases ATGCAGCTTTCGAGACTGGTGCCCCGATACAGTTCTGATATGGGCATTTCAAGGTTGATGCTGGTGAGCTTGACCGGATC AATCGTCCGGTAAATTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKMVLENRQTVALPFWGIAGLGL LFGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQTLDDLEARAKNPTAS
Sequences:
>Translated_135_residues MAQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKMVLENRQTVALPFWGIAGLGL LFGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQTLDDLEARAKNPTAS >Mature_134_residues AQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKMVLENRQTVALPFWGIAGLGLL FGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQTLDDLEARAKNPTAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15379; Mature: 15248
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKM CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH VLENRQTVALPFWGIAGLGLLFGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQ HHCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TLDDLEARAKNPTAS HHHHHHHHCCCCCCC >Mature Secondary Structure AQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKM HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH VLENRQTVALPFWGIAGLGLLFGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQ HHCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TLDDLEARAKNPTAS HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA