| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078136
Identifier: 170078136
GI number: 170078136
Start: 1611438
End: 1611953
Strand: Direct
Name: 170078136
Synonym: SYNPCC7002_A1527
Alternate gene names: NA
Gene position: 1611438-1611953 (Clockwise)
Preceding gene: 170078135
Following gene: 170078138
Centisome position: 53.57
GC content: 53.68
Gene sequence:
>516_bases TTGCCCTGGATCAATGGTTTGGTGAGCGTTGGCTCGCTGCTGCTGTGTACCCAGCTTTTGTTACTCCGCATTCCTGGGAT GACAATCCTCGGTTTCAGTCCCCAGTGGCTTTTGATGTGGGTGATTGCTTGGAGTGTAAAGCGGGAGATGATTTATGCCC TCCTGGGGGCGATCGCCGCTGCTTGGATCCATGACAGCTTAATGGTGAGTGCCTTGCCTTCCCACCTTCCAGGCTTCGTG CTGGTCGCCTATTTTGTTTCCCGCTGGCGACAACAACGCTATCTCCAGGAAGACTTTATTATTCTGGCGCTACTGGTCTT CGTGATGACCCTAGCTGCAGAAGTGATTATGGCATTTCAATATCTGCTGTGGGGGTTGGGTTCCCCAGGGATGCTCTGGG GTGAACTGCAACGGATCGGCCTCGCAACGGCAATTTTAAGTAGCCTCTGGGCACCGCTCCTTTGTACGCCTCTGGTGCGT TGGTGGGATTACGTGAGAATGCTCGATAGGCAGTAG
Upstream 100 bases:
>100_bases GGGTCATTGGAATGGGTATTGGTGGCCCCTTTTGAGCCGAAGCCCCTAAATTTTGAGCTGCAACCGGAGCAAGATGTTTC GCAAACTCCCTAGGGGGGCA
Downstream 100 bases:
>100_bases TGATGGCCCTGGGGCTTGGGAGAGTGACCATAGCGCTCCGCCAAAAAATGGGCCACAGAGAGAAGATCATTGCAATAATG ATCGGGCTGATAGGTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: PEP-CTERM Exosortase Interaction Domain Protein
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPWINGLVSVGSLLLCTQLLLLRIPGMTILGFSPQWLLMWVIAWSVKREMIYALLGAIAAAWIHDSLMVSALPSHLPGFV LVAYFVSRWRQQRYLQEDFIILALLVFVMTLAAEVIMAFQYLLWGLGSPGMLWGELQRIGLATAILSSLWAPLLCTPLVR WWDYVRMLDRQ
Sequences:
>Translated_171_residues MPWINGLVSVGSLLLCTQLLLLRIPGMTILGFSPQWLLMWVIAWSVKREMIYALLGAIAAAWIHDSLMVSALPSHLPGFV LVAYFVSRWRQQRYLQEDFIILALLVFVMTLAAEVIMAFQYLLWGLGSPGMLWGELQRIGLATAILSSLWAPLLCTPLVR WWDYVRMLDRQ >Mature_170_residues PWINGLVSVGSLLLCTQLLLLRIPGMTILGFSPQWLLMWVIAWSVKREMIYALLGAIAAAWIHDSLMVSALPSHLPGFVL VAYFVSRWRQQRYLQEDFIILALLVFVMTLAAEVIMAFQYLLWGLGSPGMLWGELQRIGLATAILSSLWAPLLCTPLVRW WDYVRMLDRQ
Specific function: Unknown
COG id: COG2891
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19505; Mature: 19374
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWINGLVSVGSLLLCTQLLLLRIPGMTILGFSPQWLLMWVIAWSVKREMIYALLGAIAA CCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AWIHDSLMVSALPSHLPGFVLVAYFVSRWRQQRYLQEDFIILALLVFVMTLAAEVIMAFQ HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLWGLGSPGMLWGELQRIGLATAILSSLWAPLLCTPLVRWWDYVRMLDRQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PWINGLVSVGSLLLCTQLLLLRIPGMTILGFSPQWLLMWVIAWSVKREMIYALLGAIAA CHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AWIHDSLMVSALPSHLPGFVLVAYFVSRWRQQRYLQEDFIILALLVFVMTLAAEVIMAFQ HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLWGLGSPGMLWGELQRIGLATAILSSLWAPLLCTPLVRWWDYVRMLDRQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA