Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078138

Identifier: 170078138

GI number: 170078138

Start: 1613063

End: 1613470

Strand: Direct

Name: 170078138

Synonym: SYNPCC7002_A1529

Alternate gene names: NA

Gene position: 1613063-1613470 (Clockwise)

Preceding gene: 170078136

Following gene: 170078140

Centisome position: 53.62

GC content: 49.75

Gene sequence:

>408_bases
ATGGCTCAGCTAGAGAAATTGATTCAGATGGCGGAAAATGAACTGACAGAATACAGTACCGACGCCCGCAAGATTGAAAA
GTTGCGCCGCAAATTTGCGTTTATGTTGAATCCTCGACAACAGCAGCAAATTAAGGATGAACTTTTGGCCCAGATGCCCC
AGGGATTTTTCGGAAAAATGGTGTTGGAAAATCGACAGACAGTCGCTTTACCTTTTTGGGGCATTGCGGGTTTGGGTTTA
CTGTTCGGCATTTCCCTCCAGCAGCCCCTTGATTTCCTCGCTCCGGCGATCGCCCTGCCCGCTGCGATTCAAATTCAACG
CTGGGGCTGGCAACTAGAAGCAAAGCGGTTGGTTTTGCAAACCCTTGACGATCTCGAAGCCCGCGCCAAAAATCCGACGG
CATCTTAA

Upstream 100 bases:

>100_bases
AGCTGAATAGTAATGGCGATCGCCTTTTGGGGGCCGGGAAGAAAATCCCAGGGAATGCCACAATAAACAGAGATTTTTAA
AGAGAGAGGCCCAAAGTACC

Downstream 100 bases:

>100_bases
ATGCAGCTTTCGAGACTGGTGCCCCGATACAGTTCTGATATGGGCATTTCAAGGTTGATGCTGGTGAGCTTGACCGGATC
AATCGTCCGGTAAATTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKMVLENRQTVALPFWGIAGLGL
LFGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQTLDDLEARAKNPTAS

Sequences:

>Translated_135_residues
MAQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKMVLENRQTVALPFWGIAGLGL
LFGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQTLDDLEARAKNPTAS
>Mature_134_residues
AQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKMVLENRQTVALPFWGIAGLGLL
FGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQTLDDLEARAKNPTAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15379; Mature: 15248

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKM
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH
VLENRQTVALPFWGIAGLGLLFGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQ
HHCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TLDDLEARAKNPTAS
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
AQLEKLIQMAENELTEYSTDARKIEKLRRKFAFMLNPRQQQQIKDELLAQMPQGFFGKM
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH
VLENRQTVALPFWGIAGLGLLFGISLQQPLDFLAPAIALPAAIQIQRWGWQLEAKRLVLQ
HHCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TLDDLEARAKNPTAS
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA