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The map label for this gene is wcaF [H]

Identifier: 170078129

GI number: 170078129

Start: 1605908

End: 1606486

Strand: Direct

Name: wcaF [H]

Synonym: SYNPCC7002_A1520

Alternate gene names: 170078129

Gene position: 1605908-1606486 (Clockwise)

Preceding gene: 170078128

Following gene: 170078131

Centisome position: 53.39

GC content: 50.26

Gene sequence:

>579_bases
GTGAGTTTTATCCATCTCGACCGCTATACCACCGGAGACTATACTCCCGGCGCTTCCTTTCTAAGGCAACTCTTGTGGTT
TTTTATCGGTGATCCTGTGGTGCGAACTCGATTGATTCCCCTATCCTCTTTTAAAGTTTGGGTATTGAGACGCTTTGGCG
CCACCATTGGTCAAGGGGTGAGGCTTAAACCCGGCGTGCGCGTTAAATTTCCTTGGCGACTGACCATCGGCGATCATTGC
TGGATTGGCGAAAATACTTGGTTTGATAACTTGGCACCAATTACCCTTGCTGACCATGTTTGTATTTCCCAGGATGTCTA
TCTCTGCACTGGTAATCACGATTGGAGCGACCCGAACTTTAAGCTAGTCACCGGTTCTATTCGCATTGAACAGGGCAGTT
GGCTGGGGGCCCGCAGTAGTATTGCTCCTGGTGTCACCATCGGCGAAGGGGCGGTGCTTTGTTTAGGGAGTGTTGCCTTG
CGATCGCTCGACCCGATGACTATCTATGGTGGTAATCCGGCGATCGCCTTAAAGCCCCGCATCATTCATCTGCAATGTGA
AGACTTTCAAGATCCATGA

Upstream 100 bases:

>100_bases
AAAAAAGGCGATCGCCTTTTTTGTCTTCGGCCATTAAGACATTATCACCATCCCTGCCTTTGAATTTTCGCTCAATTTGC
TCAATTTAAAGATTGCTGTT

Downstream 100 bases:

>100_bases
CTGAGGTTTCGGGTGCTTCATTTCGGCTGATCTCTTTGAGGTAGTCTAAGACGTCCCAAATCTCTTGTAGCAACTGTTCT
AGACCAGTTCTGGATACCGC

Product: putative colanic acid biosynthesis acetyltransferase WcaF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSFIHLDRYTTGDYTPGASFLRQLLWFFIGDPVVRTRLIPLSSFKVWVLRRFGATIGQGVRLKPGVRVKFPWRLTIGDHC
WIGENTWFDNLAPITLADHVCISQDVYLCTGNHDWSDPNFKLVTGSIRIEQGSWLGARSSIAPGVTIGEGAVLCLGSVAL
RSLDPMTIYGGNPAIALKPRIIHLQCEDFQDP

Sequences:

>Translated_192_residues
MSFIHLDRYTTGDYTPGASFLRQLLWFFIGDPVVRTRLIPLSSFKVWVLRRFGATIGQGVRLKPGVRVKFPWRLTIGDHC
WIGENTWFDNLAPITLADHVCISQDVYLCTGNHDWSDPNFKLVTGSIRIEQGSWLGARSSIAPGVTIGEGAVLCLGSVAL
RSLDPMTIYGGNPAIALKPRIIHLQCEDFQDP
>Mature_191_residues
SFIHLDRYTTGDYTPGASFLRQLLWFFIGDPVVRTRLIPLSSFKVWVLRRFGATIGQGVRLKPGVRVKFPWRLTIGDHCW
IGENTWFDNLAPITLADHVCISQDVYLCTGNHDWSDPNFKLVTGSIRIEQGSWLGARSSIAPGVTIGEGAVLCLGSVALR
SLDPMTIYGGNPAIALKPRIIHLQCEDFQDP

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1788367, Length=165, Percent_Identity=35.1515151515151, Blast_Score=118, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018357
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: 2.3.1.- [C]

Molecular weight: Translated: 21399; Mature: 21268

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIHLDRYTTGDYTPGASFLRQLLWFFIGDPVVRTRLIPLSSFKVWVLRRFGATIGQGV
CCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHCHHHCCCE
RLKPGVRVKFPWRLTIGDHCWIGENTWFDNLAPITLADHVCISQDVYLCTGNHDWSDPNF
EECCCCEEEEEEEEEECCEEEECCCCCCCCCCCEEEECCEEECCCEEEEECCCCCCCCCE
KLVTGSIRIEQGSWLGARSSIAPGVTIGEGAVLCLGSVALRSLDPMTIYGGNPAIALKPR
EEEEEEEEEECCCCCCCCCCCCCCEEECCCCEEEECHHHHHCCCCEEEECCCEEEEECCE
IIHLQCEDFQDP
EEEEEECCCCCC
>Mature Secondary Structure 
SFIHLDRYTTGDYTPGASFLRQLLWFFIGDPVVRTRLIPLSSFKVWVLRRFGATIGQGV
CEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHCHHHCCCE
RLKPGVRVKFPWRLTIGDHCWIGENTWFDNLAPITLADHVCISQDVYLCTGNHDWSDPNF
EECCCCEEEEEEEEEECCEEEECCCCCCCCCCCEEEECCEEECCCEEEEECCCCCCCCCE
KLVTGSIRIEQGSWLGARSSIAPGVTIGEGAVLCLGSVALRSLDPMTIYGGNPAIALKPR
EEEEEEEEEECCCCCCCCCCCCCCEEECCCCEEEECHHHHHCCCCEEEECCCEEEEECCE
IIHLQCEDFQDP
EEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]