| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078128
Identifier: 170078128
GI number: 170078128
Start: 1605399
End: 1605809
Strand: Direct
Name: 170078128
Synonym: SYNPCC7002_A1519
Alternate gene names: NA
Gene position: 1605399-1605809 (Clockwise)
Preceding gene: 170078127
Following gene: 170078129
Centisome position: 53.37
GC content: 53.04
Gene sequence:
>411_bases ATGATAGGCTTTCTGGCGCTACTGCCCCGTGCCCTCACCACCTTTCTCTATGCCGTTGCTGCCCTCCTGAGGTTCTATGC CGACACCGACACAATCCCAATCCAACTCTTCCCCCTCACCATCCTCCAGTGGAGTTTCCTGGCGTTCGCGCTGGGGACAG CATCTCTCCTGGTTAATCTCGGCCTTGAGTGGCACTCTGGAAATCGAGCAAAGAACGAGAGAGCACGAGCAGAGGACGAA GCAAATCGAGAACGAGATCGAGCAAATCAAGAAAGAGAACGAGCGGCTCGCCGTGCTCGAATCCAAAATCGAGGCTTTAT TCTCCAAACACGGTATCAACTTACCCCTGGCCGAGAAACCGGAGCAGCCCTAACCGATTTTCTCAGTTTTCTTCAGGAAT ATGGAGAGTAA
Upstream 100 bases:
>100_bases ACCGGCCGTACCGGAGTCAGCCTACATCCCCAGTTGGGAGCAGCATTTCCTTCAAGCAGCTGTACATATTTCACCAAGTC AGAAAGGTTAAAATGAAACC
Downstream 100 bases:
>100_bases AAAAGGCGATCGCCTTTTTTGTCTTCGGCCATTAAGACATTATCACCATCCCTGCCTTTGAATTTTCGCTCAATTTGCTC AATTTAAAGATTGCTGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MIGFLALLPRALTTFLYAVAALLRFYADTDTIPIQLFPLTILQWSFLAFALGTASLLVNLGLEWHSGNRAKNERARAEDE ANRERDRANQERERAARRARIQNRGFILQTRYQLTPGRETGAALTDFLSFLQEYGE
Sequences:
>Translated_136_residues MIGFLALLPRALTTFLYAVAALLRFYADTDTIPIQLFPLTILQWSFLAFALGTASLLVNLGLEWHSGNRAKNERARAEDE ANRERDRANQERERAARRARIQNRGFILQTRYQLTPGRETGAALTDFLSFLQEYGE >Mature_136_residues MIGFLALLPRALTTFLYAVAALLRFYADTDTIPIQLFPLTILQWSFLAFALGTASLLVNLGLEWHSGNRAKNERARAEDE ANRERDRANQERERAARRARIQNRGFILQTRYQLTPGRETGAALTDFLSFLQEYGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15520; Mature: 15520
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGFLALLPRALTTFLYAVAALLRFYADTDTIPIQLFPLTILQWSFLAFALGTASLLVNL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLEWHSGNRAKNERARAEDEANRERDRANQERERAARRARIQNRGFILQTRYQLTPGRET CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC GAALTDFLSFLQEYGE HHHHHHHHHHHHHHCC >Mature Secondary Structure MIGFLALLPRALTTFLYAVAALLRFYADTDTIPIQLFPLTILQWSFLAFALGTASLLVNL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLEWHSGNRAKNERARAEDEANRERDRANQERERAARRARIQNRGFILQTRYQLTPGRET CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC GAALTDFLSFLQEYGE HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA