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The map label for this gene is ywqD [H]

Identifier: 170078109

GI number: 170078109

Start: 1582856

End: 1585126

Strand: Reverse

Name: ywqD [H]

Synonym: SYNPCC7002_A1500

Alternate gene names: 170078109

Gene position: 1585126-1582856 (Counterclockwise)

Preceding gene: 170078110

Following gene: 170078108

Centisome position: 52.7

GC content: 47.78

Gene sequence:

>2271_bases
ATGGATAAACAAGATACCAATAACGCTGTTCTCGAATATCAAAATAACGGCCATAAAAAAAATGGCGCAGTCGCCCCAAT
ACCGTATCCTGTCTCTCCTCTATTGCAACCAGTAGACTACGGCGATGACTTCGATTTCCGCCAGTTTTTATCCGTGATGC
GGCGGCGAGCTTGGTTAATTCTGGGGGTGATAACCGTTGGCATGGGGGCGGTTACCTTCAACACATTTTCCCAAGAAAAA
ATCTATTTATCGAAGTTTCGTTTGTTAGTTGAACCCGTCAATTCCGACAATAGTGTTTCTGACCTAGCCCGGAGCCTGCC
CGGAAACTTTGGTAGCGGATCCGGTGAATTAGACTACGCTACTCAAATTCAGGTTTTACGCAGTCCCGAATTACTGCAAA
AAGTGATTCAACCACTGCAGCAACAATATCCTAACCTTAACTACAATACTCTACTCAGTAATCTCAGTATTACCCGACCG
GGAGAGACAAAAATTCTCGAAGTCAGCTATCAAAATCCAGACCCTGATCAAATTGAAGCGGTGTTAGAACAGCTTAGCTC
GGTGTACCTGGAGTATAGCTTGGCCGACCGCCAAACCAACGTTAGACAAGGTCTGCAGTTCATTGATGAACAATTACCCG
ACCTCCAACAGGAAGTGGATACTCTGCAGGCAGAGCTTCAACAGTTTCGTCAAAACTACAATTTCACCGAGCCAGAAATT
CATTTCAATCAGCTTGCCCAGAAAGCAGCAACCTTAGAGCAGCAGCGCTTCCAGTTGCAACAAGAGATGGCCCAGGCCCA
AACCCGCCTCCAATCCCTCCAAGGGGGTAGTGGAGCCTTAGCAGCCCTCGAAAATTCAGAAACCTATCAGCAGGTTCTTG
GTCAACTGCGGTCGGTCGAGGCGAACATTGCCAAAGAATCGACACGTTTCCAAGAGGGGAGCTTAAATATTCAAGTGTTG
AGGGAAGAACGCCAGAATTTATTGCCGATTCTGCAACAGGAGGCGGAACGGGTGGGGGCAACCCAAGTGACAGATGCCGC
CAATCAACTCCGCATCTTACAAGCTCGGATTCCATCCCTTAATCAAGCTCAAGCTGAAGTCGAGCAATCCTTTCAGAATC
TCGCTGTCCTAAATCGGCTATATACCGATCTCCAGCGGCGACTCGGAATTTCAACGGAAGCATTGACAGAGCTCCTAGCA
AGACGCCAAGCTCTACAAGTGCAAGCGGCACAAACGGAGATTCCATGGGAAGTCATTGAAGATGCCACCCGTCCTAACTT
ACCGATCTCCCCCAATATTCAACGGAGCTTGATGCTCGGCTTCATTGCTAGTTCGGTCTTGGGTGTCGGCGCTGCTTTGC
TGCTCGACAAGCTCACTGATGTTTATTACTCTCCAGATGATCTGAAGAATCGGACAAAGCTACCACTCTTAGCCAATATT
CCCTACGAAGAACAACATGGAATGGCCGGGACAACGGCATCGTCTTTGCCACCAATGCTGCGTGTCCAACGTTGGCTAGC
TTCTTTGATTCCGGCTTCAACGACTCGGACATGGCAAAAAATGACCGGTGGAGATCAGCCCTATGGCTATGGCTATTATG
GTGCGTCTGCCTTTTCTGAATCCCTACGGGTGCTACATACCAATCTAAAATTACTGAGTGCCGATCGCCCTTTACGTTCG
GTGATTATTGCTTCGGCTCTACCGGGGGATGGCAAATCAACAATTGCCCTGAATTTGGCACCAACGGCAGCGATTCTCGG
TCAGAAAGTATTGCTCGTTGATTCTGATATGCGGCGTCCCCAGGTTGCTCAACGTCTCAATTTAAATCAAAAGCAGGGTC
TCAGCACTGTAATTACAAACAATAGCAACGAGACTGAAATCGATAACTATTTACAGAAACCAATGCCTTTGGTGGATTTT
TCGGTGCTGCCAGCGGGGGATCTGCCTCCTGATCCAGCAAAATTACTCGCCTCTCAAAAGATGCAGCATTTGGTTAAGGA
CTTTGAGCGTACCTTCGACCTCGTTGTCTACGATACGCCGCCAGTGCTTGGACTTGCGGATGCCAGTCTGTTGGCCTCAC
ATACTGATGGTGTGATTTTAGTGGTCACTTTGAATAAAACTACGCGTTCAGCCGTTTCCCAGGCGATCGCCACCTTTAAG
CAAGCCAATATTCCAATTTTAGGACTCGTTGCTAATAGTCAAACAAAAGGTACATCTAGCAGTTCTTATTCCTATTCCTA
CTACGGTTCCCAGTCCAAGAAACGTCAATAA

Upstream 100 bases:

>100_bases
CACGCATTTTAAGTCCACTGCGCAATCTTTTGCCTTTCGGTTTCTTATTTTAAAGATGAATTTTTAAGAATTAAATTTAT
AAATTAAGCGCGAAACTACC

Downstream 100 bases:

>100_bases
TTATTTGTCTTTCTAGGCGATCGCCCACTGATCTTTTATAACCCTCTCGCACCAGGAGGGGAAATTTGTATTTCCAGCTT
TTTTCTGGGGAACAGCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 756; Mature: 756

Protein sequence:

>756_residues
MDKQDTNNAVLEYQNNGHKKNGAVAPIPYPVSPLLQPVDYGDDFDFRQFLSVMRRRAWLILGVITVGMGAVTFNTFSQEK
IYLSKFRLLVEPVNSDNSVSDLARSLPGNFGSGSGELDYATQIQVLRSPELLQKVIQPLQQQYPNLNYNTLLSNLSITRP
GETKILEVSYQNPDPDQIEAVLEQLSSVYLEYSLADRQTNVRQGLQFIDEQLPDLQQEVDTLQAELQQFRQNYNFTEPEI
HFNQLAQKAATLEQQRFQLQQEMAQAQTRLQSLQGGSGALAALENSETYQQVLGQLRSVEANIAKESTRFQEGSLNIQVL
REERQNLLPILQQEAERVGATQVTDAANQLRILQARIPSLNQAQAEVEQSFQNLAVLNRLYTDLQRRLGISTEALTELLA
RRQALQVQAAQTEIPWEVIEDATRPNLPISPNIQRSLMLGFIASSVLGVGAALLLDKLTDVYYSPDDLKNRTKLPLLANI
PYEEQHGMAGTTASSLPPMLRVQRWLASLIPASTTRTWQKMTGGDQPYGYGYYGASAFSESLRVLHTNLKLLSADRPLRS
VIIASALPGDGKSTIALNLAPTAAILGQKVLLVDSDMRRPQVAQRLNLNQKQGLSTVITNNSNETEIDNYLQKPMPLVDF
SVLPAGDLPPDPAKLLASQKMQHLVKDFERTFDLVVYDTPPVLGLADASLLASHTDGVILVVTLNKTTRSAVSQAIATFK
QANIPILGLVANSQTKGTSSSSYSYSYYGSQSKKRQ

Sequences:

>Translated_756_residues
MDKQDTNNAVLEYQNNGHKKNGAVAPIPYPVSPLLQPVDYGDDFDFRQFLSVMRRRAWLILGVITVGMGAVTFNTFSQEK
IYLSKFRLLVEPVNSDNSVSDLARSLPGNFGSGSGELDYATQIQVLRSPELLQKVIQPLQQQYPNLNYNTLLSNLSITRP
GETKILEVSYQNPDPDQIEAVLEQLSSVYLEYSLADRQTNVRQGLQFIDEQLPDLQQEVDTLQAELQQFRQNYNFTEPEI
HFNQLAQKAATLEQQRFQLQQEMAQAQTRLQSLQGGSGALAALENSETYQQVLGQLRSVEANIAKESTRFQEGSLNIQVL
REERQNLLPILQQEAERVGATQVTDAANQLRILQARIPSLNQAQAEVEQSFQNLAVLNRLYTDLQRRLGISTEALTELLA
RRQALQVQAAQTEIPWEVIEDATRPNLPISPNIQRSLMLGFIASSVLGVGAALLLDKLTDVYYSPDDLKNRTKLPLLANI
PYEEQHGMAGTTASSLPPMLRVQRWLASLIPASTTRTWQKMTGGDQPYGYGYYGASAFSESLRVLHTNLKLLSADRPLRS
VIIASALPGDGKSTIALNLAPTAAILGQKVLLVDSDMRRPQVAQRLNLNQKQGLSTVITNNSNETEIDNYLQKPMPLVDF
SVLPAGDLPPDPAKLLASQKMQHLVKDFERTFDLVVYDTPPVLGLADASLLASHTDGVILVVTLNKTTRSAVSQAIATFK
QANIPILGLVANSQTKGTSSSSYSYSYYGSQSKKRQ
>Mature_756_residues
MDKQDTNNAVLEYQNNGHKKNGAVAPIPYPVSPLLQPVDYGDDFDFRQFLSVMRRRAWLILGVITVGMGAVTFNTFSQEK
IYLSKFRLLVEPVNSDNSVSDLARSLPGNFGSGSGELDYATQIQVLRSPELLQKVIQPLQQQYPNLNYNTLLSNLSITRP
GETKILEVSYQNPDPDQIEAVLEQLSSVYLEYSLADRQTNVRQGLQFIDEQLPDLQQEVDTLQAELQQFRQNYNFTEPEI
HFNQLAQKAATLEQQRFQLQQEMAQAQTRLQSLQGGSGALAALENSETYQQVLGQLRSVEANIAKESTRFQEGSLNIQVL
REERQNLLPILQQEAERVGATQVTDAANQLRILQARIPSLNQAQAEVEQSFQNLAVLNRLYTDLQRRLGISTEALTELLA
RRQALQVQAAQTEIPWEVIEDATRPNLPISPNIQRSLMLGFIASSVLGVGAALLLDKLTDVYYSPDDLKNRTKLPLLANI
PYEEQHGMAGTTASSLPPMLRVQRWLASLIPASTTRTWQKMTGGDQPYGYGYYGASAFSESLRVLHTNLKLLSADRPLRS
VIIASALPGDGKSTIALNLAPTAAILGQKVLLVDSDMRRPQVAQRLNLNQKQGLSTVITNNSNETEIDNYLQKPMPLVDF
SVLPAGDLPPDPAKLLASQKMQHLVKDFERTFDLVVYDTPPVLGLADASLLASHTDGVILVVTLNKTTRSAVSQAIATFK
QANIPILGLVANSQTKGTSSSSYSYSYYGSQSKKRQ

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=597, Percent_Identity=22.7805695142379, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI87082032, Length=214, Percent_Identity=29.4392523364486, Blast_Score=113, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 83855; Mature: 83855

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQDTNNAVLEYQNNGHKKNGAVAPIPYPVSPLLQPVDYGDDFDFRQFLSVMRRRAWLI
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LGVITVGMGAVTFNTFSQEKIYLSKFRLLVEPVNSDNSVSDLARSLPGNFGSGSGELDYA
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHH
TQIQVLRSPELLQKVIQPLQQQYPNLNYNTLLSNLSITRPGETKILEVSYQNPDPDQIEA
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEECCCCCCEEEEEEECCCCHHHHHH
VLEQLSSVYLEYSLADRQTNVRQGLQFIDEQLPDLQQEVDTLQAELQQFRQNYNFTEPEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
HFNQLAQKAATLEQQRFQLQQEMAQAQTRLQSLQGGSGALAALENSETYQQVLGQLRSVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH
ANIAKESTRFQEGSLNIQVLREERQNLLPILQQEAERVGATQVTDAANQLRILQARIPSL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
NQAQAEVEQSFQNLAVLNRLYTDLQRRLGISTEALTELLARRQALQVQAAQTEIPWEVIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DATRPNLPISPNIQRSLMLGFIASSVLGVGAALLLDKLTDVYYSPDDLKNRTKLPLLANI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEECC
PYEEQHGMAGTTASSLPPMLRVQRWLASLIPASTTRTWQKMTGGDQPYGYGYYGASAFSE
CCHHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHH
SLRVLHTNLKLLSADRPLRSVIIASALPGDGKSTIALNLAPTAAILGQKVLLVDSDMRRP
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCEEEEECCCCCCH
QVAQRLNLNQKQGLSTVITNNSNETEIDNYLQKPMPLVDFSVLPAGDLPPDPAKLLASQK
HHHHHCCCCHHCCCEEEEECCCCCHHHHHHHHCCCCEECEEECCCCCCCCCHHHHHHHHH
MQHLVKDFERTFDLVVYDTPPVLGLADASLLASHTDGVILVVTLNKTTRSAVSQAIATFK
HHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH
QANIPILGLVANSQTKGTSSSSYSYSYYGSQSKKRQ
HCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MDKQDTNNAVLEYQNNGHKKNGAVAPIPYPVSPLLQPVDYGDDFDFRQFLSVMRRRAWLI
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LGVITVGMGAVTFNTFSQEKIYLSKFRLLVEPVNSDNSVSDLARSLPGNFGSGSGELDYA
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHH
TQIQVLRSPELLQKVIQPLQQQYPNLNYNTLLSNLSITRPGETKILEVSYQNPDPDQIEA
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEECCCCCCEEEEEEECCCCHHHHHH
VLEQLSSVYLEYSLADRQTNVRQGLQFIDEQLPDLQQEVDTLQAELQQFRQNYNFTEPEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
HFNQLAQKAATLEQQRFQLQQEMAQAQTRLQSLQGGSGALAALENSETYQQVLGQLRSVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH
ANIAKESTRFQEGSLNIQVLREERQNLLPILQQEAERVGATQVTDAANQLRILQARIPSL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
NQAQAEVEQSFQNLAVLNRLYTDLQRRLGISTEALTELLARRQALQVQAAQTEIPWEVIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DATRPNLPISPNIQRSLMLGFIASSVLGVGAALLLDKLTDVYYSPDDLKNRTKLPLLANI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEECC
PYEEQHGMAGTTASSLPPMLRVQRWLASLIPASTTRTWQKMTGGDQPYGYGYYGASAFSE
CCHHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHH
SLRVLHTNLKLLSADRPLRSVIIASALPGDGKSTIALNLAPTAAILGQKVLLVDSDMRRP
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCEEEEECCCCCCH
QVAQRLNLNQKQGLSTVITNNSNETEIDNYLQKPMPLVDFSVLPAGDLPPDPAKLLASQK
HHHHHCCCCHHCCCEEEEECCCCCHHHHHHHHCCCCEECEEECCCCCCCCCHHHHHHHHH
MQHLVKDFERTFDLVVYDTPPVLGLADASLLASHTDGVILVVTLNKTTRSAVSQAIATFK
HHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH
QANIPILGLVANSQTKGTSSSSYSYSYYGSQSKKRQ
HCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]