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The map label for this gene is yaiC [C]

Identifier: 170078108

GI number: 170078108

Start: 1580953

End: 1582512

Strand: Reverse

Name: yaiC [C]

Synonym: SYNPCC7002_A1499

Alternate gene names: 170078108

Gene position: 1582512-1580953 (Counterclockwise)

Preceding gene: 170078109

Following gene: 170078107

Centisome position: 52.61

GC content: 48.59

Gene sequence:

>1560_bases
ATGCTTGATCTCACTTCCTACAAATCCGTTGAAAAATGCCTCATTAAAGACCCCATTATGCTCGCGGCGGAGACCACCTT
GCTTGAAGCGGCAAACACCATGGCGAGTTTAAAGCGCACCTGTGAGTTACAAGACAAAACAAGCGATGCCCTAGAGGTCA
ATAGTAGCCGCGCCAGTTGTATTCTCGTGATGGCAGGCCAACAATTACAGGGGATTGTGACCGAACGCGACCTCTTGAAA
TGGGTCATCCTAGATCAAAATTGGCAGCAGATCACCCTAAAGCAAATTATGACGACCTCTGTCATCTCCCTAACTTGGGA
TCAGTCTTTAACGCCTCTGCATATTTCTCAACTGTTGCAAAAACATCGGATTCGTCACTTACCAGTTCTAGACACAGAAG
GTAAGCTATTTGGTTTAATCACCCACCGCTTACTGCGCGGTGTCATTGAACCGGTGCATTTGCTGCGCCTGCGATTTGTC
ACAGAAGTGATGGTGAGTCGCGTGGTTTATGGTGCCCCCCAACAATCCATGTGGCACTTGGCTAAGGTGATGATGGAATG
TCGTGTGGGTTCAATTGTCATTGTTAAACCCCATCCGACCCTCGAACAGGCTTGGTTTCCCCTGGGAATTGTCACAGAAC
AGGATATTTTACATTTACGTTCCCTGGATGTGGATTTGAAAAAAATCACAGCGGAACAAACCATGACCCGGCCAATCAAA
ATTGCGGTGCATCGTTCTTTGATCGAGGCTAAACAACTGATGGAACAACACCAAACCCACCGCTTGATTGTGGTTGGGGA
GCACCACGAACTCCTGGGGTTGGTGACCCAATCGAATTTGCTGGAGGCGATGAACCAAAATGAGATGTACGGGCTTGTGA
GTTTTTTAGAACAGCAGATCAAAGAGCGCACCCAGGAACTAGACCGCCTCAATCAAAAACTTCGTCAAGAGGTGCAGGAA
CGGAAAAAAGCCGAAAATCGCATTCGTCAACTGTCTCTCACGGATGAATTGACAGGCGTTTACAATCGTCGGGGTTTCTT
TATGCTCGTCGAACAGGAATTATCCTTGTTGGAGCGCCAAAAGTTGCCTTTCTCGCTCTTTTTCTTCGATGTGGATAATC
TAAAGATGATTAATGATCACCTGGGCCATGGGGTAGGCGATCGCGTCATTGTCGATGCAGCCCAGATTCTGCGGGACAGC
TTCCGGAGGGCAGATATTCTGGCCCGGCTGGGGGGCGATGAATTTACCTGTTTTGCGCCGGTGAACCAGGCAGAAGCGGA
TCTGATTTGCCAACGACTCCAAACGGCGATCGCCAACTTCAACCAACAACAACAGCGTCCCTACCAACTTTCTATTAGTA
CTGGTTACGCTAGTTATACGGAATATCCAGGCAATGCGTCCCTACGCACCCTATTGAAACAAGCTGACGAGAAAATGTAC
CGGAATAAGCGGCAGCGAAAACAAGGGCGACAATCTGCCGGTGACGACACCCCCCGCCCCAATACCACAAAACAGAACAC
AGATCCGGACTATTTGCCTAAACAATCCCTTAACTTGTAG

Upstream 100 bases:

>100_bases
TAAATACTTCTAGGCACCTCCATTCCAGTTGCTTGAGTCGTTGTGGCCCATTGCAACAGGTCATTTTTTCTTCAGGGCAA
ACTTTTGTCGCGTTTTACCT

Downstream 100 bases:

>100_bases
AATTTAAAGTTCTGGAAGCTAACAGATTTCTATAGAAAAAATTATTCTGTCAATATTATGAGTAAGCGTTTACAGGTAGT
CCTAAATCAGGACGTGCGCA

Product: GGDEF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MLDLTSYKSVEKCLIKDPIMLAAETTLLEAANTMASLKRTCELQDKTSDALEVNSSRASCILVMAGQQLQGIVTERDLLK
WVILDQNWQQITLKQIMTTSVISLTWDQSLTPLHISQLLQKHRIRHLPVLDTEGKLFGLITHRLLRGVIEPVHLLRLRFV
TEVMVSRVVYGAPQQSMWHLAKVMMECRVGSIVIVKPHPTLEQAWFPLGIVTEQDILHLRSLDVDLKKITAEQTMTRPIK
IAVHRSLIEAKQLMEQHQTHRLIVVGEHHELLGLVTQSNLLEAMNQNEMYGLVSFLEQQIKERTQELDRLNQKLRQEVQE
RKKAENRIRQLSLTDELTGVYNRRGFFMLVEQELSLLERQKLPFSLFFFDVDNLKMINDHLGHGVGDRVIVDAAQILRDS
FRRADILARLGGDEFTCFAPVNQAEADLICQRLQTAIANFNQQQQRPYQLSISTGYASYTEYPGNASLRTLLKQADEKMY
RNKRQRKQGRQSAGDDTPRPNTTKQNTDPDYLPKQSLNL

Sequences:

>Translated_519_residues
MLDLTSYKSVEKCLIKDPIMLAAETTLLEAANTMASLKRTCELQDKTSDALEVNSSRASCILVMAGQQLQGIVTERDLLK
WVILDQNWQQITLKQIMTTSVISLTWDQSLTPLHISQLLQKHRIRHLPVLDTEGKLFGLITHRLLRGVIEPVHLLRLRFV
TEVMVSRVVYGAPQQSMWHLAKVMMECRVGSIVIVKPHPTLEQAWFPLGIVTEQDILHLRSLDVDLKKITAEQTMTRPIK
IAVHRSLIEAKQLMEQHQTHRLIVVGEHHELLGLVTQSNLLEAMNQNEMYGLVSFLEQQIKERTQELDRLNQKLRQEVQE
RKKAENRIRQLSLTDELTGVYNRRGFFMLVEQELSLLERQKLPFSLFFFDVDNLKMINDHLGHGVGDRVIVDAAQILRDS
FRRADILARLGGDEFTCFAPVNQAEADLICQRLQTAIANFNQQQQRPYQLSISTGYASYTEYPGNASLRTLLKQADEKMY
RNKRQRKQGRQSAGDDTPRPNTTKQNTDPDYLPKQSLNL
>Mature_519_residues
MLDLTSYKSVEKCLIKDPIMLAAETTLLEAANTMASLKRTCELQDKTSDALEVNSSRASCILVMAGQQLQGIVTERDLLK
WVILDQNWQQITLKQIMTTSVISLTWDQSLTPLHISQLLQKHRIRHLPVLDTEGKLFGLITHRLLRGVIEPVHLLRLRFV
TEVMVSRVVYGAPQQSMWHLAKVMMECRVGSIVIVKPHPTLEQAWFPLGIVTEQDILHLRSLDVDLKKITAEQTMTRPIK
IAVHRSLIEAKQLMEQHQTHRLIVVGEHHELLGLVTQSNLLEAMNQNEMYGLVSFLEQQIKERTQELDRLNQKLRQEVQE
RKKAENRIRQLSLTDELTGVYNRRGFFMLVEQELSLLERQKLPFSLFFFDVDNLKMINDHLGHGVGDRVIVDAAQILRDS
FRRADILARLGGDEFTCFAPVNQAEADLICQRLQTAIANFNQQQQRPYQLSISTGYASYTEYPGNASLRTLLKQADEKMY
RNKRQRKQGRQSAGDDTPRPNTTKQNTDPDYLPKQSLNL

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=177, Percent_Identity=31.0734463276836, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1788085, Length=192, Percent_Identity=32.8125, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87081881, Length=181, Percent_Identity=28.1767955801105, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1788956, Length=178, Percent_Identity=34.8314606741573, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI87082007, Length=169, Percent_Identity=31.3609467455621, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081974, Length=161, Percent_Identity=33.5403726708075, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI145693134, Length=154, Percent_Identity=29.8701298701299, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788381, Length=173, Percent_Identity=30.635838150289, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787262, Length=155, Percent_Identity=30.9677419354839, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787541, Length=193, Percent_Identity=26.9430051813472, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI87081977, Length=185, Percent_Identity=30.2702702702703, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787802, Length=163, Percent_Identity=30.6748466257669, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 59616; Mature: 59616

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLTSYKSVEKCLIKDPIMLAAETTLLEAANTMASLKRTCELQDKTSDALEVNSSRASC
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCE
ILVMAGQQLQGIVTERDLLKWVILDQNWQQITLKQIMTTSVISLTWDQSLTPLHISQLLQ
EEEECCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
KHRIRHLPVLDTEGKLFGLITHRLLRGVIEPVHLLRLRFVTEVMVSRVVYGAPQQSMWHL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AKVMMECRVGSIVIVKPHPTLEQAWFPLGIVTEQDILHLRSLDVDLKKITAEQTMTRPIK
HHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHH
IAVHRSLIEAKQLMEQHQTHRLIVVGEHHELLGLVTQSNLLEAMNQNEMYGLVSFLEQQI
HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KERTQELDRLNQKLRQEVQERKKAENRIRQLSLTDELTGVYNRRGFFMLVEQELSLLERQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
KLPFSLFFFDVDNLKMINDHLGHGVGDRVIVDAAQILRDSFRRADILARLGGDEFTCFAP
CCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
VNQAEADLICQRLQTAIANFNQQQQRPYQLSISTGYASYTEYPGNASLRTLLKQADEKMY
CCCHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
RNKRQRKQGRQSAGDDTPRPNTTKQNTDPDYLPKQSLNL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDLTSYKSVEKCLIKDPIMLAAETTLLEAANTMASLKRTCELQDKTSDALEVNSSRASC
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCE
ILVMAGQQLQGIVTERDLLKWVILDQNWQQITLKQIMTTSVISLTWDQSLTPLHISQLLQ
EEEECCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
KHRIRHLPVLDTEGKLFGLITHRLLRGVIEPVHLLRLRFVTEVMVSRVVYGAPQQSMWHL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AKVMMECRVGSIVIVKPHPTLEQAWFPLGIVTEQDILHLRSLDVDLKKITAEQTMTRPIK
HHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHH
IAVHRSLIEAKQLMEQHQTHRLIVVGEHHELLGLVTQSNLLEAMNQNEMYGLVSFLEQQI
HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KERTQELDRLNQKLRQEVQERKKAENRIRQLSLTDELTGVYNRRGFFMLVEQELSLLERQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
KLPFSLFFFDVDNLKMINDHLGHGVGDRVIVDAAQILRDSFRRADILARLGGDEFTCFAP
CCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
VNQAEADLICQRLQTAIANFNQQQQRPYQLSISTGYASYTEYPGNASLRTLLKQADEKMY
CCCHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
RNKRQRKQGRQSAGDDTPRPNTTKQNTDPDYLPKQSLNL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]