Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078102

Identifier: 170078102

GI number: 170078102

Start: 1575037

End: 1576023

Strand: Reverse

Name: 170078102

Synonym: SYNPCC7002_A1493

Alternate gene names: NA

Gene position: 1576023-1575037 (Counterclockwise)

Preceding gene: 170078104

Following gene: 170078101

Centisome position: 52.39

GC content: 54.81

Gene sequence:

>987_bases
ATGAACGAACTGCGCACAACTTCCTTGGATTCCCTAGAATCTGATTCTTGGTCTGCTGAAGCAGAGGCTAACCGTCTCAT
GGATGATGTGTTTGCGGATATCGATCAGCTCTTAGGCGATCGCCAGCCGCCCCAATCTTTTAGGCGATCGCCAGAACCGG
AAGTCAGACCGATGCAATCAGTCTTAGTCACCCAGGGAGATCTCATGGGGCCTCCGCCAGAGGAACCCCCTTTTCCACCA
GAGGAGATCGACGCAGAACTGGTGGTCAAACGGGGCTGGGGCTATTACACAGAGCGACTTCTATTTATCTGCTCCTGTGC
TTCTTTGGTGGGCGGTATTCTGTGGTTAGCGGCGAATGATCAGTTAAAAATGCCGCAATTCCTCAGTCGTTCTACCCCTC
CGGCGACGGAGACAGTCCCCCCAGAAAACCCAGAGCCGGGAACAGAATTTGCGAACTATATTCAGCGAGCGCTCGACAAT
ATTGACCGCCAAGCGGATACAGAAGCACCAGCATCAGAGGCGAATTCCGGGCCACAGGTCATTGAACGCATTTATATTCC
GGTCTATCCACCGAATGCGGGCACCAATGGCAGCGCAAACTTATCCCAAGGTCTGGCTCTCTTACCACCACCGCCAAGTG
TTGAACCTCCCGTGGCGATCGCCCCCCCACCGCCACCAAAGCAAAATTCAGCTCCCTTGGCGATCGTGCCACCCCCTGCA
CCCCGTGCGGTGACCCCAACCGTCAACGATGTACCTGCGCCCCCCGCAGCGCCAAAGACGATGTATAGCCTCGTGGGGGT
TTTAGAAGCGGGCGATCGCTCCGAAGCTTTATTCAAAATCAATGGCACCACCCAACGGTTCCGTCTCGGTGAAGAGTTGG
GCAGTGGCAGTTGGAAGTTGATTGGTGCCCAAAGCAACCAAGTCATCCTAGAGCGAGCAGGCCAAACGCGCACTGTTTAT
GTTGGTCAAGACTTCCCCAGCAATTAA

Upstream 100 bases:

>100_bases
CTCGACGCTGCACCATGGGCTGATCGCTAATTTCGGCACGGTTAGGTGGCGAGATCCTGATTACAATTAAAAGCAATTTT
TCTGCCCCCCTCTTGGTGAT

Downstream 100 bases:

>100_bases
ACTGCTAAAGGACGTTTTTAAGTTTTTGAGGCAGAGATTGTGTTGGCGTTTGGGAATCAACAGCCGATTCGGTTCGGCAC
AGACGGTTGGCGTGGCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQSVLVTQGDLMGPPPEEPPFPP
EEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAANDQLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDN
IDRQADTEAPASEANSGPQVIERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA
PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKLIGAQSNQVILERAGQTRTVY
VGQDFPSN

Sequences:

>Translated_328_residues
MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQSVLVTQGDLMGPPPEEPPFPP
EEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAANDQLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDN
IDRQADTEAPASEANSGPQVIERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA
PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKLIGAQSNQVILERAGQTRTVY
VGQDFPSN
>Mature_328_residues
MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQSVLVTQGDLMGPPPEEPPFPP
EEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAANDQLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDN
IDRQADTEAPASEANSGPQVIERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA
PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKLIGAQSNQVILERAGQTRTVY
VGQDFPSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35388; Mature: 35388

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQS
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHH
VLVTQGDLMGPPPEEPPFPPEEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAAND
HHHHCCCCCCCCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCC
QLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDNIDRQADTEAPASEANSGPQV
CCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHH
IERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA
HHEEEEEEECCCCCCCCCCHHHCCEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCC
PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEE
IGAQSNQVILERAGQTRTVYVGQDFPSN
EECCCCEEHEECCCCEEEEEECCCCCCC
>Mature Secondary Structure
MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQS
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHH
VLVTQGDLMGPPPEEPPFPPEEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAAND
HHHHCCCCCCCCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCC
QLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDNIDRQADTEAPASEANSGPQV
CCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHH
IERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA
HHEEEEEEECCCCCCCCCCHHHCCEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCC
PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEE
IGAQSNQVILERAGQTRTVYVGQDFPSN
EECCCCEEHEECCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA