| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078100
Identifier: 170078100
GI number: 170078100
Start: 1572916
End: 1573446
Strand: Reverse
Name: 170078100
Synonym: SYNPCC7002_A1491
Alternate gene names: NA
Gene position: 1573446-1572916 (Counterclockwise)
Preceding gene: 170078101
Following gene: 170078099
Centisome position: 52.31
GC content: 48.21
Gene sequence:
>531_bases ATGATGTTCAATCGCTCCCTCGCCATTTATTCCACATTAATTTGCGGCAGTTTCGGGATCTGCTCCACGAAGGCGATCGC CCAACCCCAGTGCAACGCCCCCTTAACAGAAATTGTGCCCCAACTCCTGGAAGATCTACCCAGCTACGGCAATCGGGTCA TCCAACGGGCGCGTAATTTAGACCGCACTGAAGATAGTTTTAGTTATATTGTCATCGCCAGTCCAGGAAATTTAACTCCT CTGCCCCTCAAAAATCGTCAATATACGCCGACGGTTCCTGACACCACAGAGCAGATTTTTTTCACCACCTTAGAAACCCA ATACAACAACAGTCAAAAAATCAGCTTTGAAAACTACTATTGGTTGTTTCTAACCCCTACGAAAAATGGTTGGGCGATCG CCAATGTCGTTTCTAGCCTTGCCAATCCTGATCCTAGCCAACCAGCTAACCCTCCCCGTGATGCTTCCCGAGGTTCCGTG GGTCAAGCCACCAAGCTTTGGCTCCGCGATTTTAATGCAAAATGCCAATAG
Upstream 100 bases:
>100_bases CCAAGCCGAAGGTTAGACTAAACAGACAGGGAAGATGAAATATTTCTCCCTGCTCTGCCTGGGTTCACTGCCGAGTTAAT GCCTTTGCACTACTAAAAAT
Downstream 100 bases:
>100_bases GCCGAGATAATCAAAACACTACAAACTTAGAATAGCACTGTAACAGTACACAACAATAAAAGCATACATGAATACAAAAT TTATTTCTTGGCTAATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MMFNRSLAIYSTLICGSFGICSTKAIAQPQCNAPLTEIVPQLLEDLPSYGNRVIQRARNLDRTEDSFSYIVIASPGNLTP LPLKNRQYTPTVPDTTEQIFFTTLETQYNNSQKISFENYYWLFLTPTKNGWAIANVVSSLANPDPSQPANPPRDASRGSV GQATKLWLRDFNAKCQ
Sequences:
>Translated_176_residues MMFNRSLAIYSTLICGSFGICSTKAIAQPQCNAPLTEIVPQLLEDLPSYGNRVIQRARNLDRTEDSFSYIVIASPGNLTP LPLKNRQYTPTVPDTTEQIFFTTLETQYNNSQKISFENYYWLFLTPTKNGWAIANVVSSLANPDPSQPANPPRDASRGSV GQATKLWLRDFNAKCQ >Mature_176_residues MMFNRSLAIYSTLICGSFGICSTKAIAQPQCNAPLTEIVPQLLEDLPSYGNRVIQRARNLDRTEDSFSYIVIASPGNLTP LPLKNRQYTPTVPDTTEQIFFTTLETQYNNSQKISFENYYWLFLTPTKNGWAIANVVSSLANPDPSQPANPPRDASRGSV GQATKLWLRDFNAKCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19685; Mature: 19685
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFNRSLAIYSTLICGSFGICSTKAIAQPQCNAPLTEIVPQLLEDLPSYGNRVIQRARNL CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DRTEDSFSYIVIASPGNLTPLPLKNRQYTPTVPDTTEQIFFTTLETQYNNSQKISFENYY CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCEEEECCEE WLFLTPTKNGWAIANVVSSLANPDPSQPANPPRDASRGSVGQATKLWLRDFNAKCQ EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MMFNRSLAIYSTLICGSFGICSTKAIAQPQCNAPLTEIVPQLLEDLPSYGNRVIQRARNL CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DRTEDSFSYIVIASPGNLTPLPLKNRQYTPTVPDTTEQIFFTTLETQYNNSQKISFENYY CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCEEEECCEE WLFLTPTKNGWAIANVVSSLANPDPSQPANPPRDASRGSVGQATKLWLRDFNAKCQ EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA