Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078099

Identifier: 170078099

GI number: 170078099

Start: 1571616

End: 1572593

Strand: Reverse

Name: 170078099

Synonym: SYNPCC7002_A1490

Alternate gene names: NA

Gene position: 1572593-1571616 (Counterclockwise)

Preceding gene: 170078100

Following gene: 170078096

Centisome position: 52.28

GC content: 45.71

Gene sequence:

>978_bases
ATGAAAAACCTTTCTGTAAAGCTTTTAAGTGGAACAGCCACCATGACTGCTGTTTCTCTGATGGCGATTAATCCTGCTAC
TGCGGATACTGTTTCCGGTTCTGTCACTTTTACCTCTGCTGGCGAAGCGATTTCTGCCTATGCGGTTGAAGTAGACAGTC
CCGGCAGTCGTTTCAACTCTGCCGAAATTGGCATTGGCTATCGTCCCCTCGATGTTGGCCAACTATTCACTGTTGGCAAC
ACCTTATATGGTTCTCTTCTCAACGATGGTCTCGGGACAACTCCCAATGTACCTGGTGTTAATGGCGGTAACGGAGTTAA
CGGTATCGGGAGCTTAGCTTCCTTTCTTACTCAAAACAACTTAACTCTCGTCGGTGGTGCTGGTGCGATTCAAAACATCA
TTGCACAGCTCAACAGTGATGCTAATGGTGGTGTGAATTTAGATAACATTGACTGGACACTAGCTAGCGGTAATACCATT
TGTGCTGGCGATTTAGTTTCCCTAACCCCCACTGAAAATCCCGTCTGTTTTGAGGTAGAAGCAGTTGCTCCTCTGACTGT
TACCGACGAAGGCTTTGTCGCAGCTAATGTTGAGCTAACGGGTTCCTTTGACCCCACTGTTATTCTGTCTGACGCCCTTG
GTTATCTTGAATTCATAGCTCAAGATGTACGCAATTCTTCGGTTGTGCTTGCCAATGGTTTAGATAACACCGATCTCGGT
CCTCTAGTTGATGCTATCCTTCAGTATTCTATTAGTGAAGTTCTCCTAGGTGGTGGTTCTTTAGAACAGGTTATTGCGAC
TGTCTACGATAATCCCAATCTTACTACCGACACCAAAAATGCGATTTTTCAAGCCTTGGCTGAAAGCGGATATCTTAATA
GTCTATCTACTATTGATACCGATCTCGATGCCCTCCTCGGCCCTGGCGGTGTAGCAACCATTAATCCTTCTACACTAGGT
CTTCTACCTGTGCCTTAA

Upstream 100 bases:

>100_bases
TAACTTTTAGTCAATTATCTAGCTCTAAGAGCTCAGGATTTCTGTTTGTTCGTCTATAAGTTTGAGTTTGCCTAATTATC
ATGGATAAAAGATTATTCCA

Downstream 100 bases:

>100_bases
AATCACTGTCATTCGAGCTTTTCAAAGAATTTTATTCATTCTTAATTCCTGATTTGCAAAGGAGAGATAACGACTAAATC
ATCTCTCCTCTTTTCTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKNLSVKLLSGTATMTAVSLMAINPATADTVSGSVTFTSAGEAISAYAVEVDSPGSRFNSAEIGIGYRPLDVGQLFTVGN
TLYGSLLNDGLGTTPNVPGVNGGNGVNGIGSLASFLTQNNLTLVGGAGAIQNIIAQLNSDANGGVNLDNIDWTLASGNTI
CAGDLVSLTPTENPVCFEVEAVAPLTVTDEGFVAANVELTGSFDPTVILSDALGYLEFIAQDVRNSSVVLANGLDNTDLG
PLVDAILQYSISEVLLGGGSLEQVIATVYDNPNLTTDTKNAIFQALAESGYLNSLSTIDTDLDALLGPGGVATINPSTLG
LLPVP

Sequences:

>Translated_325_residues
MKNLSVKLLSGTATMTAVSLMAINPATADTVSGSVTFTSAGEAISAYAVEVDSPGSRFNSAEIGIGYRPLDVGQLFTVGN
TLYGSLLNDGLGTTPNVPGVNGGNGVNGIGSLASFLTQNNLTLVGGAGAIQNIIAQLNSDANGGVNLDNIDWTLASGNTI
CAGDLVSLTPTENPVCFEVEAVAPLTVTDEGFVAANVELTGSFDPTVILSDALGYLEFIAQDVRNSSVVLANGLDNTDLG
PLVDAILQYSISEVLLGGGSLEQVIATVYDNPNLTTDTKNAIFQALAESGYLNSLSTIDTDLDALLGPGGVATINPSTLG
LLPVP
>Mature_325_residues
MKNLSVKLLSGTATMTAVSLMAINPATADTVSGSVTFTSAGEAISAYAVEVDSPGSRFNSAEIGIGYRPLDVGQLFTVGN
TLYGSLLNDGLGTTPNVPGVNGGNGVNGIGSLASFLTQNNLTLVGGAGAIQNIIAQLNSDANGGVNLDNIDWTLASGNTI
CAGDLVSLTPTENPVCFEVEAVAPLTVTDEGFVAANVELTGSFDPTVILSDALGYLEFIAQDVRNSSVVLANGLDNTDLG
PLVDAILQYSISEVLLGGGSLEQVIATVYDNPNLTTDTKNAIFQALAESGYLNSLSTIDTDLDALLGPGGVATINPSTLG
LLPVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33000; Mature: 33000

Theoretical pI: Translated: 3.39; Mature: 3.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLSVKLLSGTATMTAVSLMAINPATADTVSGSVTFTSAGEAISAYAVEVDSPGSRFNS
CCCCEEEEEECCHHHHEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCC
AEIGIGYRPLDVGQLFTVGNTLYGSLLNDGLGTTPNVPGVNGGNGVNGIGSLASFLTQNN
CCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
LTLVGGAGAIQNIIAQLNSDANGGVNLDNIDWTLASGNTICAGDLVSLTPTENPVCFEVE
EEEEECCHHHHHHHHHHCCCCCCCEEECCCEEEEECCCEEEECCEEEECCCCCCEEEEEE
AVAPLTVTDEGFVAANVELTGSFDPTVILSDALGYLEFIAQDVRNSSVVLANGLDNTDLG
EECEEEECCCCEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH
PLVDAILQYSISEVLLGGGSLEQVIATVYDNPNLTTDTKNAIFQALAESGYLNSLSTIDT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCC
DLDALLGPGGVATINPSTLGLLPVP
CHHHHHCCCCEEEECCCCEEEEECC
>Mature Secondary Structure
MKNLSVKLLSGTATMTAVSLMAINPATADTVSGSVTFTSAGEAISAYAVEVDSPGSRFNS
CCCCEEEEEECCHHHHEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCC
AEIGIGYRPLDVGQLFTVGNTLYGSLLNDGLGTTPNVPGVNGGNGVNGIGSLASFLTQNN
CCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
LTLVGGAGAIQNIIAQLNSDANGGVNLDNIDWTLASGNTICAGDLVSLTPTENPVCFEVE
EEEEECCHHHHHHHHHHCCCCCCCEEECCCEEEEECCCEEEECCEEEECCCCCCEEEEEE
AVAPLTVTDEGFVAANVELTGSFDPTVILSDALGYLEFIAQDVRNSSVVLANGLDNTDLG
EECEEEECCCCEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH
PLVDAILQYSISEVLLGGGSLEQVIATVYDNPNLTTDTKNAIFQALAESGYLNSLSTIDT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCC
DLDALLGPGGVATINPSTLGLLPVP
CHHHHHCCCCEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA