Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078095

Identifier: 170078095

GI number: 170078095

Start: 1565952

End: 1567124

Strand: Reverse

Name: 170078095

Synonym: SYNPCC7002_A1486

Alternate gene names: NA

Gene position: 1567124-1565952 (Counterclockwise)

Preceding gene: 170078096

Following gene: 170078094

Centisome position: 52.1

GC content: 48.85

Gene sequence:

>1173_bases
ATGAAATTATTGAATCGATTCATTGGGGGTCTGATGCTAGTCTGGCTTGCCCAGGGGACTAAAGCCGCAGCCTTTATGAC
CCACTTAATTCCCGGCCACGAATACCTCACCCTTTTTGCCCTTGAACAATTGCAAACAAGCCCCGATCCCCTGACGCGCA
ACTTCTATGGCACCCCCGTCGGCTCCATTGATCGTCAAGCCCATCCTTTATTTAATGGCAATACCCTGGTGGATTTTCCG
GGGCTAGATCGTCCCTTTGCCGAGCAGTTGATGCAGATCTTAGTCGGGCCAGAAGATTGGGAAGTTCTATCTGAAGCGGA
ACGGGATGAATTATTAGCGGGCATGATTCGCCACGATGACAATCGCTCCCAAATTACAAACTTCACGCGCAATTATCTGG
GGAACGCCCAAGAAGAATCCGTCAGTGCCCATGAATCCTGTGGGTTATCCCATAATTTCATCAAAGACATCATTATCCAT
GGCGTTATTTCCATGGCCGGGCCATTGTCCCCACAGCCAGACTCCGACAGTTTTGACCAGCGACATCGAAAAATGACGGG
CCTTAAATTTATTGGGGCTGCCCTCCATACTCTGCAAGACTCTTTTTCTAAGGCCCATACCCAAAGACACCCGGACACAT
GGCTCATCGAAGATATTTGTAGTTATCGCTTTGCCTACTTCGGCCGCAATGAATCTTCTGGCTATTCGGTAGGCTGTGTC
CACACCCATTTTCCCTTTGAGGAAGATTTTGGTGGTGGGTCGTTATTAATCGATGATCAGGTGTGGGACCGGGGTCAAAC
GGGCTGTGAAATAGGAACAGACGGTCAATTGATCAAAAGTTTTGCTTGCCTAAAGGATGAGACCAAGATGGCCGTGGTGG
TCACGCGGGATTTGCTGGCATTATTAGTGCCTTTTTTGAACCACGCCCTCTGGCACCAAGAGGTTTTACAGACTGAGCTA
GAAACGACCTTGATGGATTTTTTGCAGACTTATCACCCAGACCCAGTGTTAAGGGCAGCCGACCAGGGGATTATGAGCTG
CGATCGCCTGGTGGATTTTTCACCCCACACCCGTTTCGATGCCCACCCCCCAGAAATTCAACCCGTTACAATCGACTTTG
AACCAGTGCCGTTCCAGCAAAATTTAATGGAGATATTTTTGAATGACCTTTAA

Upstream 100 bases:

>100_bases
GCTATTGTTTTTCGGGTGCATGTAAAAGGAGAGCCAGAGCGTATCCTAGTAGAAAATGAAGAATAAGTTCTCCATCCAGG
GGCAAAAATAGCTTGAGATA

Downstream 100 bases:

>100_bases
GCTCGATAGCCTGCCTTCACAACAAGGCAAAAAAGCCATCGTTACCGGCGCAAATACAGGGCTTGGCTTTGAAACAGCCC
TCGGTTTGGCAAAAACAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKLLNRFIGGLMLVWLAQGTKAAAFMTHLIPGHEYLTLFALEQLQTSPDPLTRNFYGTPVGSIDRQAHPLFNGNTLVDFP
GLDRPFAEQLMQILVGPEDWEVLSEAERDELLAGMIRHDDNRSQITNFTRNYLGNAQEESVSAHESCGLSHNFIKDIIIH
GVISMAGPLSPQPDSDSFDQRHRKMTGLKFIGAALHTLQDSFSKAHTQRHPDTWLIEDICSYRFAYFGRNESSGYSVGCV
HTHFPFEEDFGGGSLLIDDQVWDRGQTGCEIGTDGQLIKSFACLKDETKMAVVVTRDLLALLVPFLNHALWHQEVLQTEL
ETTLMDFLQTYHPDPVLRAADQGIMSCDRLVDFSPHTRFDAHPPEIQPVTIDFEPVPFQQNLMEIFLNDL

Sequences:

>Translated_390_residues
MKLLNRFIGGLMLVWLAQGTKAAAFMTHLIPGHEYLTLFALEQLQTSPDPLTRNFYGTPVGSIDRQAHPLFNGNTLVDFP
GLDRPFAEQLMQILVGPEDWEVLSEAERDELLAGMIRHDDNRSQITNFTRNYLGNAQEESVSAHESCGLSHNFIKDIIIH
GVISMAGPLSPQPDSDSFDQRHRKMTGLKFIGAALHTLQDSFSKAHTQRHPDTWLIEDICSYRFAYFGRNESSGYSVGCV
HTHFPFEEDFGGGSLLIDDQVWDRGQTGCEIGTDGQLIKSFACLKDETKMAVVVTRDLLALLVPFLNHALWHQEVLQTEL
ETTLMDFLQTYHPDPVLRAADQGIMSCDRLVDFSPHTRFDAHPPEIQPVTIDFEPVPFQQNLMEIFLNDL
>Mature_390_residues
MKLLNRFIGGLMLVWLAQGTKAAAFMTHLIPGHEYLTLFALEQLQTSPDPLTRNFYGTPVGSIDRQAHPLFNGNTLVDFP
GLDRPFAEQLMQILVGPEDWEVLSEAERDELLAGMIRHDDNRSQITNFTRNYLGNAQEESVSAHESCGLSHNFIKDIIIH
GVISMAGPLSPQPDSDSFDQRHRKMTGLKFIGAALHTLQDSFSKAHTQRHPDTWLIEDICSYRFAYFGRNESSGYSVGCV
HTHFPFEEDFGGGSLLIDDQVWDRGQTGCEIGTDGQLIKSFACLKDETKMAVVVTRDLLALLVPFLNHALWHQEVLQTEL
ETTLMDFLQTYHPDPVLRAADQGIMSCDRLVDFSPHTRFDAHPPEIQPVTIDFEPVPFQQNLMEIFLNDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43997; Mature: 43997

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure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CCCCCCCEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA