Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078089

Identifier: 170078089

GI number: 170078089

Start: 1557436

End: 1558617

Strand: Direct

Name: 170078089

Synonym: SYNPCC7002_A1480

Alternate gene names: NA

Gene position: 1557436-1558617 (Clockwise)

Preceding gene: 170078088

Following gene: 170078093

Centisome position: 51.78

GC content: 53.55

Gene sequence:

>1182_bases
ATGCAAAAATTTTACTATTACACCCTCCCCGCCACGGCCTTTGTTTTCAGTGCGATCGCCGCCTATCAGTTTTTTGGGAA
CCGCACCACCGCCAGTATTCAGCCCTCGCCGCCCCAACCGGGCTTTGGTGCTGTTTTAAAACAAACCCCAACTGAACCTG
AGCCGAGTCTTCCTACCCCAGAGCCAGGGATCACTCCACCAATCCCCGTGGCGATCGCCCGCACGGTGACTGGATCGGAA
AAAGCCAGTATTTTTCAGCGGGTGGTGGATCAGCAAGCCAGCCTTGGCCTCTGCCTGGACAACGATAATTTGGCTGCGAA
TCTCGATGATGCGGCGGTGTATCAACAGGGCGAAGATCAATATTTGGTGAGTGTGCTGTGCTTTATGGCGGCCTACCAAG
GAGCCTATGAGTTTGTTTATGTTGACGGTGAAACCATCACCCATTCCCGCTTGGCCCTCGCTGGCTTTCCCACCTTTGAC
CCAGAAACTAGCGTTCTCAGCAATGGCTATAAATTTAACGGCGCAGGAACTTGCCTAGAGGACTCTGAATATTATTGGGA
TGGCTATAGCCTGCGGCTTGTCTCTGCTAGTTTGATCGATGGCGTCCCCAATGGCTGTGCGGATCTCGGCGTGCGATCGC
CCAGTGCAGATTATCTAATTACCGCCGAGGGGGTCGGGCCTGCCCGTCTAGGAATGACTTTTAGAGAGTTCAAAGCCCAA
CTTCCCGAAGCGGCCACCTTGGAAGCCGTGCCTTTGGGGGTTGATCTGCCCACCGGCTGGCAAGTAAATCTCTATGGCGC
AGCCCAGTTTGTGGTGGCCTTTGATGGGGACAGTGGTGACAATCTCCCCGGTGACCAGGACAAAATTATTCGGATTATGG
TGGACAATCCCAGCTACCGTACCGCGGCAGGAGTTGGCCCTGGCACTCTCCTATCCGAGGCGATCGCCGCCTATGGCCCT
GCAACCCTCAGCTACAGCACAGAAAATGAAAGTCGAGAATTGATTCAATTTGCCGACTCCCCTTTCAACACTGACCAAAC
ATCCTGGCTCTTTTTCCGCTCGAATCAATGGACCCTAAGCGATTACGCAGGTATTTATCCTGATCGCCAAGACAGCTATC
AAACGACCACCCAATACGAAGACCATGCCGCCATCGGCTCCATTTGGCTGACCCAATATTGA

Upstream 100 bases:

>100_bases
GGGTTCCCAGACCTATTCTGCGCAACTCTGTCTCTAGCGTTTTTTTTGGCTGGAATGTTTGACTGAAATTTAAAGTGATT
ACCCAGGAGCCCTGCCCACC

Downstream 100 bases:

>100_bases
TTGAGGGACTACTCTTGAATTTTTAAGACGGTCACTAAATTCAGGGCCTGAAGCTGGGAATAAATGAGCAGATTGGAGAT
GAGAGACGTGACAATGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MQKFYYYTLPATAFVFSAIAAYQFFGNRTTASIQPSPPQPGFGAVLKQTPTEPEPSLPTPEPGITPPIPVAIARTVTGSE
KASIFQRVVDQQASLGLCLDNDNLAANLDDAAVYQQGEDQYLVSVLCFMAAYQGAYEFVYVDGETITHSRLALAGFPTFD
PETSVLSNGYKFNGAGTCLEDSEYYWDGYSLRLVSASLIDGVPNGCADLGVRSPSADYLITAEGVGPARLGMTFREFKAQ
LPEAATLEAVPLGVDLPTGWQVNLYGAAQFVVAFDGDSGDNLPGDQDKIIRIMVDNPSYRTAAGVGPGTLLSEAIAAYGP
ATLSYSTENESRELIQFADSPFNTDQTSWLFFRSNQWTLSDYAGIYPDRQDSYQTTTQYEDHAAIGSIWLTQY

Sequences:

>Translated_393_residues
MQKFYYYTLPATAFVFSAIAAYQFFGNRTTASIQPSPPQPGFGAVLKQTPTEPEPSLPTPEPGITPPIPVAIARTVTGSE
KASIFQRVVDQQASLGLCLDNDNLAANLDDAAVYQQGEDQYLVSVLCFMAAYQGAYEFVYVDGETITHSRLALAGFPTFD
PETSVLSNGYKFNGAGTCLEDSEYYWDGYSLRLVSASLIDGVPNGCADLGVRSPSADYLITAEGVGPARLGMTFREFKAQ
LPEAATLEAVPLGVDLPTGWQVNLYGAAQFVVAFDGDSGDNLPGDQDKIIRIMVDNPSYRTAAGVGPGTLLSEAIAAYGP
ATLSYSTENESRELIQFADSPFNTDQTSWLFFRSNQWTLSDYAGIYPDRQDSYQTTTQYEDHAAIGSIWLTQY
>Mature_393_residues
MQKFYYYTLPATAFVFSAIAAYQFFGNRTTASIQPSPPQPGFGAVLKQTPTEPEPSLPTPEPGITPPIPVAIARTVTGSE
KASIFQRVVDQQASLGLCLDNDNLAANLDDAAVYQQGEDQYLVSVLCFMAAYQGAYEFVYVDGETITHSRLALAGFPTFD
PETSVLSNGYKFNGAGTCLEDSEYYWDGYSLRLVSASLIDGVPNGCADLGVRSPSADYLITAEGVGPARLGMTFREFKAQ
LPEAATLEAVPLGVDLPTGWQVNLYGAAQFVVAFDGDSGDNLPGDQDKIIRIMVDNPSYRTAAGVGPGTLLSEAIAAYGP
ATLSYSTENESRELIQFADSPFNTDQTSWLFFRSNQWTLSDYAGIYPDRQDSYQTTTQYEDHAAIGSIWLTQY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42631; Mature: 42631

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFYYYTLPATAFVFSAIAAYQFFGNRTTASIQPSPPQPGFGAVLKQTPTEPEPSLPTP
CCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCC
EPGITPPIPVAIARTVTGSEKASIFQRVVDQQASLGLCLDNDNLAANLDDAAVYQQGEDQ
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCEECCCHHHHHHCCCCH
YLVSVLCFMAAYQGAYEFVYVDGETITHSRLALAGFPTFDPETSVLSNGYKFNGAGTCLE
HHHHHHHHHHHHCCCEEEEEECCCEEECCEEEEECCCCCCCCHHHHHCCEEECCCCCEEE
DSEYYWDGYSLRLVSASLIDGVPNGCADLGVRSPSADYLITAEGVGPARLGMTFREFKAQ
CCCEEECCEEEEEEEEHHHCCCCCCHHHCCCCCCCCCEEEEECCCCHHHHCCHHHHHHHH
LPEAATLEAVPLGVDLPTGWQVNLYGAAQFVVAFDGDSGDNLPGDQDKIIRIMVDNPSYR
CCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCC
TAAGVGPGTLLSEAIAAYGPATLSYSTENESRELIQFADSPFNTDQTSWLFFRSNQWTLS
EECCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCEEEEEECCCEEHH
DYAGIYPDRQDSYQTTTQYEDHAAIGSIWLTQY
HCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MQKFYYYTLPATAFVFSAIAAYQFFGNRTTASIQPSPPQPGFGAVLKQTPTEPEPSLPTP
CCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCC
EPGITPPIPVAIARTVTGSEKASIFQRVVDQQASLGLCLDNDNLAANLDDAAVYQQGEDQ
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCEECCCHHHHHHCCCCH
YLVSVLCFMAAYQGAYEFVYVDGETITHSRLALAGFPTFDPETSVLSNGYKFNGAGTCLE
HHHHHHHHHHHHCCCEEEEEECCCEEECCEEEEECCCCCCCCHHHHHCCEEECCCCCEEE
DSEYYWDGYSLRLVSASLIDGVPNGCADLGVRSPSADYLITAEGVGPARLGMTFREFKAQ
CCCEEECCEEEEEEEEHHHCCCCCCHHHCCCCCCCCCEEEEECCCCHHHHCCHHHHHHHH
LPEAATLEAVPLGVDLPTGWQVNLYGAAQFVVAFDGDSGDNLPGDQDKIIRIMVDNPSYR
CCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCC
TAAGVGPGTLLSEAIAAYGPATLSYSTENESRELIQFADSPFNTDQTSWLFFRSNQWTLS
EECCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCEEEEEECCCEEHH
DYAGIYPDRQDSYQTTTQYEDHAAIGSIWLTQY
HCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA