Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078085

Identifier: 170078085

GI number: 170078085

Start: 1554767

End: 1554976

Strand: Direct

Name: 170078085

Synonym: SYNPCC7002_A1476

Alternate gene names: NA

Gene position: 1554767-1554976 (Clockwise)

Preceding gene: 170078084

Following gene: 170078086

Centisome position: 51.69

GC content: 48.1

Gene sequence:

>210_bases
ATGGCTACTGGTTATACTTCCAACGAATTCGGTCAACTCAACAGCTTTGCAATCGAGCCTGAAGTCTACGTTGATACAGA
ACATACCGCCGGCTGGACAGCCTACGCCGAAAAGTTAAATGGCCGCCTGGCAATGATTGGTTTTGTGGCGCTCATCGCAA
CGGAATTGATTGGTGGCGATACCCTGATCAATCTCTTGTTCCAACTCTAA

Upstream 100 bases:

>100_bases
ATGGCTCACACCCCAGAAAAATATTTTTTCGTCAATAACTTGCAATATTTGTTTACATTTTGTTATATTTATTCATGTAA
GCAAGCACGAGGTTCCCTCA

Downstream 100 bases:

>100_bases
TTTTTTAGTTTTTTCCCAGTTATTTGTCGTTTTACGAGGCTAGTTGCAATGTTTGGTTCCCTGGTTATCTTGATTCGCAA
AGTCATGGGTACAGCCCGTT

Product: high light inducible protein

Products: NA

Alternate protein names: CAB/ELIP/HLIP Superfamily Protein; High Light Inducible Protein; High Light-Inducible Protein

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGDTLINLLFQL

Sequences:

>Translated_69_residues
MATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGDTLINLLFQL
>Mature_68_residues
ATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGDTLINLLFQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7513; Mature: 7381

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGD
CCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
TLINLLFQL
HHHHHHHCC
>Mature Secondary Structure 
ATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGD
CCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
TLINLLFQL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA