The gene/protein map for NC_006155 is currently unavailable.
Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078075

Identifier: 170078075

GI number: 170078075

Start: 1541486

End: 1542055

Strand: Reverse

Name: 170078075

Synonym: SYNPCC7002_A1466

Alternate gene names: NA

Gene position: 1542055-1541486 (Counterclockwise)

Preceding gene: 170078076

Following gene: 170078073

Centisome position: 51.26

GC content: 44.74

Gene sequence:

>570_bases
ATGACAATCACCACAGTACAATCTCAACAATATTCTTTGCCTGAGTTTTTGGCATTACCCGAAACCAAACCAGCAAGTGA
ATATATCAACGGGAAAATTCATCAAAAACCCATGCCCCAAGGAAAGCACAGCACATTACAAGGTCGTTTAGTGGCGGAAA
TTAATCGCGTTGGACAGTCTGAAAAATTAGCCTATGCTTTTCCTGAATTGCGCTGTACCTTCGGCGATCGCTCCCTTGTA
CCTGATATTGCGGTGTTCGAGTGGGCCAATATTCCTGTAGACGAAAATGGCGAAATCCAAAATCGGTTTTCTGTTGCCCC
AGATTGGGTAATTGAAATTCTCTCTCCAGAACAAAATCCACCCAGAGTCATCGAAAAAATTCTTTTTTCTCTGCAACAAG
GGACAAAACTTGGTTGGCTCATTGCCCCAGAGGACTACTCAGTCACCATTTTTTACCCTGATAAACTCGCTGAATTCAAA
GAACAAGACGATCCGCTTCCCGTTTTGCCAGCGATCGCCCCTTGGCAACTCACCGCCACAGAATTATTTGCCTGGTTACG
CCTCGTCTGA

Upstream 100 bases:

>100_bases
TTATTGAGTAAATTCATGACGTTTTGGAGCTATTACTGCTGCGATGGCTTTTCAATAATGGTGAAAATAATATTTTGTTA
CGTAAATAGGAGAAATTGCA

Downstream 100 bases:

>100_bases
AGCCTAGTGCGACAAATTATTTTTTCAAATTGGGGAGATCGCCTGTTAACAGAAAATCATGGCCGATGGATTGAAGTTGA
ACATTTTCGAGGGTGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQSEKLAYAFPELRCTFGDRSLV
PDIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNPPRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFK
EQDDPLPVLPAIAPWQLTATELFAWLRLV

Sequences:

>Translated_189_residues
MTITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQSEKLAYAFPELRCTFGDRSLV
PDIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNPPRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFK
EQDDPLPVLPAIAPWQLTATELFAWLRLV
>Mature_188_residues
TITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQSEKLAYAFPELRCTFGDRSLVP
DIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNPPRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFKE
QDDPLPVLPAIAPWQLTATELFAWLRLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21432; Mature: 21301

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQS
CEEEECCCCCCCCCHHHCCCCCCCHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHCCCC
EKLAYAFPELRCTFGDRSLVPDIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNP
CCEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCHHHHHEEECCCCCC
PRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFKEQDDPLPVLPAIAPWQLTAT
HHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCEECHH
ELFAWLRLV
HHHHHHHCC
>Mature Secondary Structure 
TITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQS
EEEECCCCCCCCCHHHCCCCCCCHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHCCCC
EKLAYAFPELRCTFGDRSLVPDIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNP
CCEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCHHHHHEEECCCCCC
PRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFKEQDDPLPVLPAIAPWQLTAT
HHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCEECHH
ELFAWLRLV
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA