Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078076

Identifier: 170078076

GI number: 170078076

Start: 1542203

End: 1543939

Strand: Reverse

Name: 170078076

Synonym: SYNPCC7002_A1467

Alternate gene names: NA

Gene position: 1543939-1542203 (Counterclockwise)

Preceding gene: 170078077

Following gene: 170078075

Centisome position: 51.33

GC content: 35.0

Gene sequence:

>1737_bases
ATGTCCAGTTGGCAGTCAGCTTATCAGTCTATAAACGAATTGGACGCATATAAAGATAATGCTTTAGGTTTATTTGCGCT
AGCACTGAAATTTGGTCTTGAGGATCTTCCTAGTGTTGCTGCCGATTGTGTTACTGATGGTAGTGATGACAAAAAGCTTG
ATATTGTTTATCTTAATCAAGAAGAGAAATATGCTGTTATTGCACAGTGTTATTTTTCGTCGAAAGATAAAGATAAAGCT
CCTGCAAATAAGGCATCAGATTTAAATACTGGCATAGGCTGGCTACTACAGCGAGAAATCAATGATGTCCCTGAGCGAAT
TAAATCATCCGCCATTAATTTAAGGGAAGCGATAAAACAAGATGAAGTTGAAAAAATATATGTTTGGTATGTTCATAATC
TACCTGAATCAACAAATGTAGAGGAAGAACTAAAGACTGTGCAACAGACAGTTTCCAATACTCTAAACAGCAGTTTTTCC
GAGAAAAAAATACAAGTTATTTATTGTGAAGTTGGAACAAATTGTTTACAAACTTGGTACGAAGAATGTCAAACTCCAAT
ACTTGTAACAGAAGAAATTTCATTCGATTGTAAGTCTGGCTATGAAATTGAAGGAGAAGATTGGAAAGCTTATTGCACCG
CAGTTTCTGCAGAAAAACTATACCAACTATATAGAAAATATCAAACAAAGATTTTCTCTGCTAACATTAGAGACTATCTA
GGATCTAGAGCATCCGACTCCAACATTAACAACGGAATCAAGAATACAGTAGAGAATGATGCTGGAAATTTTTGGGTTTA
TAATAATGGACTAACTATTATTACTCATTCTTATGATGTAAAGGAAGGTGAAAGTCGAAAAATCATTGTAAGTGGACTTT
CAATAGTCAACGGGGCTCAAACCACTGGTGCGATCGGCTCTTTGAAAGTACCTCCAGGTAACAGTGCAATGGTTCAAGCT
CGATTTATTGCTATTAATCAGGGAAATCCTGATTTAATTCAGCAAATCATTCAATTCAATAATAGTCAAAATAAAGTGGA
AGCTGCGGACTTTAGGAGTACTGATAAAATTCAAAAGCGACTGAAGACAGAAATGCAAGAAATTCCTGATGCTGAATATG
AAGGTGGACGCAGAGGAGGAGCTGGTGATGCTATTAGACGTAGACCAAATCTTCTTGCTTCTTATTCCGTAGGCCAGGCA
TTAGCAGCTTTTCATGGCGATCCAATCACTGCATATAATAAAAAGTCAGGTATTTGGATTAACGATAGACTTTATTCAAA
ATATTTTAATGAAAGAACGAAAGCATCTCATCTAGTTTGTACCTATTCATTAGTTAAAGCTATTGAGACTAAGAAGGAAG
AATTAATTAAAAAGCAAGAACTGACAACAATTCAGTCGAATGTATTATCTTTCTTTAGAAAGCGCGGTTCAATATATTTG
TTTACATATGCCATTTCCTCTTGTTTGGAAGTCTTTTTAGATCGAAAAATCCCTGACTTATTCAGTGTTTCTTTTGGAAA
AAAGTGCTCTCCCATCCAAGCAAGAGAAAACTGGAATCTTGTTATTGATAAGTTACTACCCTTCTGTACTCAGTTAAATA
CTGCATTAGACAATAGCTTAAAGAATATTGGAGAAATTGAGGCTGCCATTAATAATCTTCGATCTTTAGTAGCTGCAACC
CGTGATTCTAATCAAGAAATATACAGTGAATTTGCTGATTGTATAGAAATCAAATAA

Upstream 100 bases:

>100_bases
TCTTCTTTATATTTAAAGTTTTTTGTGTTTTTGATAAGATGAAATATGTTTTTTGAATCAGTCGGTCATTGTAAACTTTT
TTAAAAAGGAAATTTTAAGT

Downstream 100 bases:

>100_bases
TACTTGATAAGCTAGTGGTTTTGTTTTGCTCTATAAATTGGCCATTATTATTGAGTAAATTCATGACGTTTTGGAGCTAT
TACTGCTGCGATGGCTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MSSWQSAYQSINELDAYKDNALGLFALALKFGLEDLPSVAADCVTDGSDDKKLDIVYLNQEEKYAVIAQCYFSSKDKDKA
PANKASDLNTGIGWLLQREINDVPERIKSSAINLREAIKQDEVEKIYVWYVHNLPESTNVEEELKTVQQTVSNTLNSSFS
EKKIQVIYCEVGTNCLQTWYEECQTPILVTEEISFDCKSGYEIEGEDWKAYCTAVSAEKLYQLYRKYQTKIFSANIRDYL
GSRASDSNINNGIKNTVENDAGNFWVYNNGLTIITHSYDVKEGESRKIIVSGLSIVNGAQTTGAIGSLKVPPGNSAMVQA
RFIAINQGNPDLIQQIIQFNNSQNKVEAADFRSTDKIQKRLKTEMQEIPDAEYEGGRRGGAGDAIRRRPNLLASYSVGQA
LAAFHGDPITAYNKKSGIWINDRLYSKYFNERTKASHLVCTYSLVKAIETKKEELIKKQELTTIQSNVLSFFRKRGSIYL
FTYAISSCLEVFLDRKIPDLFSVSFGKKCSPIQARENWNLVIDKLLPFCTQLNTALDNSLKNIGEIEAAINNLRSLVAAT
RDSNQEIYSEFADCIEIK

Sequences:

>Translated_578_residues
MSSWQSAYQSINELDAYKDNALGLFALALKFGLEDLPSVAADCVTDGSDDKKLDIVYLNQEEKYAVIAQCYFSSKDKDKA
PANKASDLNTGIGWLLQREINDVPERIKSSAINLREAIKQDEVEKIYVWYVHNLPESTNVEEELKTVQQTVSNTLNSSFS
EKKIQVIYCEVGTNCLQTWYEECQTPILVTEEISFDCKSGYEIEGEDWKAYCTAVSAEKLYQLYRKYQTKIFSANIRDYL
GSRASDSNINNGIKNTVENDAGNFWVYNNGLTIITHSYDVKEGESRKIIVSGLSIVNGAQTTGAIGSLKVPPGNSAMVQA
RFIAINQGNPDLIQQIIQFNNSQNKVEAADFRSTDKIQKRLKTEMQEIPDAEYEGGRRGGAGDAIRRRPNLLASYSVGQA
LAAFHGDPITAYNKKSGIWINDRLYSKYFNERTKASHLVCTYSLVKAIETKKEELIKKQELTTIQSNVLSFFRKRGSIYL
FTYAISSCLEVFLDRKIPDLFSVSFGKKCSPIQARENWNLVIDKLLPFCTQLNTALDNSLKNIGEIEAAINNLRSLVAAT
RDSNQEIYSEFADCIEIK
>Mature_577_residues
SSWQSAYQSINELDAYKDNALGLFALALKFGLEDLPSVAADCVTDGSDDKKLDIVYLNQEEKYAVIAQCYFSSKDKDKAP
ANKASDLNTGIGWLLQREINDVPERIKSSAINLREAIKQDEVEKIYVWYVHNLPESTNVEEELKTVQQTVSNTLNSSFSE
KKIQVIYCEVGTNCLQTWYEECQTPILVTEEISFDCKSGYEIEGEDWKAYCTAVSAEKLYQLYRKYQTKIFSANIRDYLG
SRASDSNINNGIKNTVENDAGNFWVYNNGLTIITHSYDVKEGESRKIIVSGLSIVNGAQTTGAIGSLKVPPGNSAMVQAR
FIAINQGNPDLIQQIIQFNNSQNKVEAADFRSTDKIQKRLKTEMQEIPDAEYEGGRRGGAGDAIRRRPNLLASYSVGQAL
AAFHGDPITAYNKKSGIWINDRLYSKYFNERTKASHLVCTYSLVKAIETKKEELIKKQELTTIQSNVLSFFRKRGSIYLF
TYAISSCLEVFLDRKIPDLFSVSFGKKCSPIQARENWNLVIDKLLPFCTQLNTALDNSLKNIGEIEAAINNLRSLVAATR
DSNQEIYSEFADCIEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65012; Mature: 64881

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSWQSAYQSINELDAYKDNALGLFALALKFGLEDLPSVAADCVTDGSDDKKLDIVYLNQ
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEEEECC
EEKYAVIAQCYFSSKDKDKAPANKASDLNTGIGWLLQREINDVPERIKSSAINLREAIKQ
CCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEVEKIYVWYVHNLPESTNVEEELKTVQQTVSNTLNSSFSEKKIQVIYCEVGTNCLQTWY
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHH
EECQTPILVTEEISFDCKSGYEIEGEDWKAYCTAVSAEKLYQLYRKYQTKIFSANIRDYL
HHHCCCEEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
GSRASDSNINNGIKNTVENDAGNFWVYNNGLTIITHSYDVKEGESRKIIVSGLSIVNGAQ
CCCCCCCCCCCHHHHHHCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCHHHCCCC
TTGAIGSLKVPPGNSAMVQARFIAINQGNPDLIQQIIQFNNSQNKVEAADFRSTDKIQKR
CCCCCCEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHH
LKTEMQEIPDAEYEGGRRGGAGDAIRRRPNLLASYSVGQALAAFHGDPITAYNKKSGIWI
HHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEE
NDRLYSKYFNERTKASHLVCTYSLVKAIETKKEELIKKQELTTIQSNVLSFFRKRGSIYL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FTYAISSCLEVFLDRKIPDLFSVSFGKKCSPIQARENWNLVIDKLLPFCTQLNTALDNSL
EHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KNIGEIEAAINNLRSLVAATRDSNQEIYSEFADCIEIK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSWQSAYQSINELDAYKDNALGLFALALKFGLEDLPSVAADCVTDGSDDKKLDIVYLNQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEEEECC
EEKYAVIAQCYFSSKDKDKAPANKASDLNTGIGWLLQREINDVPERIKSSAINLREAIKQ
CCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEVEKIYVWYVHNLPESTNVEEELKTVQQTVSNTLNSSFSEKKIQVIYCEVGTNCLQTWY
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHH
EECQTPILVTEEISFDCKSGYEIEGEDWKAYCTAVSAEKLYQLYRKYQTKIFSANIRDYL
HHHCCCEEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
GSRASDSNINNGIKNTVENDAGNFWVYNNGLTIITHSYDVKEGESRKIIVSGLSIVNGAQ
CCCCCCCCCCCHHHHHHCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCHHHCCCC
TTGAIGSLKVPPGNSAMVQARFIAINQGNPDLIQQIIQFNNSQNKVEAADFRSTDKIQKR
CCCCCCEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHH
LKTEMQEIPDAEYEGGRRGGAGDAIRRRPNLLASYSVGQALAAFHGDPITAYNKKSGIWI
HHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEE
NDRLYSKYFNERTKASHLVCTYSLVKAIETKKEELIKKQELTTIQSNVLSFFRKRGSIYL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FTYAISSCLEVFLDRKIPDLFSVSFGKKCSPIQARENWNLVIDKLLPFCTQLNTALDNSL
EHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KNIGEIEAAINNLRSLVAATRDSNQEIYSEFADCIEIK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA