Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078053

Identifier: 170078053

GI number: 170078053

Start: 1516792

End: 1517181

Strand: Reverse

Name: 170078053

Synonym: SYNPCC7002_A1444

Alternate gene names: NA

Gene position: 1517181-1516792 (Counterclockwise)

Preceding gene: 170078065

Following gene: 170078052

Centisome position: 50.44

GC content: 51.54

Gene sequence:

>390_bases
ATGTTTCTGAAAAAAGTTTCTCTGACGGTCTTGTCTTCTCTCCTCCTGCTCGCGGGTGCCTCGATACCCGTAAAAGCCCA
AGTCTATGTCAATGGCGAATATATCCAGGGCGAAGATTTGATGATCCTTGAGTATCTGGCTGGCGGCTCGATTCCTGCGG
GGAGTTACTGGCTGGATTACTACACTGGTGCGTGGGGCTATGCAGGCGATTACACGGTGCAAGGTTACCTTGGCGCTGGC
AGTAATAATTACGACGGCAGCTATGGGAATGATTCTAGCGGCTATGATTCCTACTACAGCACTGGTGGGGCTGGGGGCTA
CGGTTCCTATGTCTCCGATGGTGACTGCGCCTATTTCTCATCGGGAGATATCTCCGTTTCTACCTGCTAA

Upstream 100 bases:

>100_bases
AATTTTGTGGCCACTACTTATCCCCAGCAACCTGACCTAATCGTTCCAGAATGCTTCAGTCTCTAACTTTTCTAGTTTTC
CCTCACGGGAGGTTTGGTCC

Downstream 100 bases:

>100_bases
AGATCAAGAGGGCGATCGCCAATATTTTTTTGACTAGGCGTAGGCGAAAGGTTGGGGTTTGCGTGCAAAAACCTCAGCCC
AAAGCCAATTTTTCCAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MFLKKVSLTVLSSLLLLAGASIPVKAQVYVNGEYIQGEDLMILEYLAGGSIPAGSYWLDYYTGAWGYAGDYTVQGYLGAG
SNNYDGSYGNDSSGYDSYYSTGGAGGYGSYVSDGDCAYFSSGDISVSTC

Sequences:

>Translated_129_residues
MFLKKVSLTVLSSLLLLAGASIPVKAQVYVNGEYIQGEDLMILEYLAGGSIPAGSYWLDYYTGAWGYAGDYTVQGYLGAG
SNNYDGSYGNDSSGYDSYYSTGGAGGYGSYVSDGDCAYFSSGDISVSTC
>Mature_129_residues
MFLKKVSLTVLSSLLLLAGASIPVKAQVYVNGEYIQGEDLMILEYLAGGSIPAGSYWLDYYTGAWGYAGDYTVQGYLGAG
SNNYDGSYGNDSSGYDSYYSTGGAGGYGSYVSDGDCAYFSSGDISVSTC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13526; Mature: 13526

Theoretical pI: Translated: 3.56; Mature: 3.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKKVSLTVLSSLLLLAGASIPVKAQVYVNGEYIQGEDLMILEYLAGGSIPAGSYWLDY
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCCCEEEEE
YTGAWGYAGDYTVQGYLGAGSNNYDGSYGNDSSGYDSYYSTGGAGGYGSYVSDGDCAYFS
ECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
SGDISVSTC
CCCEEEEEC
>Mature Secondary Structure
MFLKKVSLTVLSSLLLLAGASIPVKAQVYVNGEYIQGEDLMILEYLAGGSIPAGSYWLDY
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCCCEEEEE
YTGAWGYAGDYTVQGYLGAGSNNYDGSYGNDSSGYDSYYSTGGAGGYGSYVSDGDCAYFS
ECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
SGDISVSTC
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA