| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078043
Identifier: 170078043
GI number: 170078043
Start: 1505658
End: 1506881
Strand: Direct
Name: 170078043
Synonym: SYNPCC7002_A1434
Alternate gene names: NA
Gene position: 1505658-1506881 (Clockwise)
Preceding gene: 170078042
Following gene: 170078044
Centisome position: 50.05
GC content: 55.31
Gene sequence:
>1224_bases ATGTTAGATCTAATCAAACTTGCGGGACAACTGCCAGACATGGGGGCGCACCTCCAGGAACAGGCCGCTACAGGACGTGA ACGCATTGAGCGAGGCTTAAGCCTGCTTCAGGAAGCCCAGGCGGATTTTCAGACCCTCCAGGCCCACCAAAATACCTGGG GCGATCGCCTCATTTTTAACCATGGCATTCCCCTCGAATCTCTGGAGACTCGCGTTCCCATTTCGCCCCCTTCCCAAGCC CACACGGTTTTTGCCACGGATGGCTCCCAGATTGCCCCGTCCCACCACGAAATTGCCTACTGTTATTTGATTAATATTGG TCGAGTGATGCTCCACTACGGCCAAAGCTTGCACCCATTGCTCGATCATCTGCCGGAGATTTTTTATCGCAGCGAAGATC TGTACACCTCCCGCAAATGGGGCATCCGCACCGATGAATGGCTCGGTTATCGCCGCACTGCCTCCGAAGCCGAAGTGCTC GCTGAGATGGCCTGTAAGTGGGTATTGCCCCCTGGTGCCCACGGCCATATTCCCAACGTGGCGATGGTAGATGGCTCTCT GGTCTATTGGTTTTTAGAAAATTTGCCCGCCGAAGCCCGCCAACAAATTCTCGAACCCCTCCTGGGAGCCTGGCAACAAC TCCGGGAAACCCGCATTCCGCTGATTGGTTACATTAGTTCCACCCGCAGTGTGGAAGCCGTGCATTTCCTGCGGCTCCAG GCTTGCCCCCACGACAAACCCGACTGTCAAACCCATTGCCTCGACGGCGAAACCAAGGAACGCAAACCGGAATTTCGCGA AACTCTCCCCTGTCAAACCATTGAACCGTTGCGGGATAGCACCCTCTTTGAGCAACTGTTGCAACCGGGCGATCGCAGTG GTCTTTGGCTCAGTCAGGCGCGCATTTTAAATCATTATCCAGAAGCGGATCAGGTTTGTTTTTGTTATCTCCATGTGGGG ACGGAGGTGGCGCGGATCGAGATGCCCCGCTGGGTCGCGGCAGATCCTCAACTCCTCGATCAAACCCTAGGCATTGTCCT CGGCCAAGTGCAAAAGGGGTTTGGGTATCCTGTGGCGATCGCCGAAGCCCACAATCAAGCTGTGATCCGGGGTGGCGATC GCGCCCGATTTTTTGCGCTCCTCGAACAACAACTCCTCAAAGCAGGGTTAACCAACGTCGGTGTCTCTTACAAAGAAACT CGCAAGCGGGGTTCCGTGGCTTAA
Upstream 100 bases:
>100_bases GTAACCCTGACGATCCGTTACTAACACCCTGCTTTTTGGGCTAAATTACGCTTAAATCTAGGGGCGATCGCCTTGTGGGA TAGGGGCGAAACTTGAGGGA
Downstream 100 bases:
>100_bases AGAGCATGCTCTCCCCCCACAAAGACTTTTCAGGAGAATTCTGAAACTCCCCTAAGCCAGTCCCAATCCCCCATCGGAGA GCATACAATAAACAAGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MLDLIKLAGQLPDMGAHLQEQAATGRERIERGLSLLQEAQADFQTLQAHQNTWGDRLIFNHGIPLESLETRVPISPPSQA HTVFATDGSQIAPSHHEIAYCYLINIGRVMLHYGQSLHPLLDHLPEIFYRSEDLYTSRKWGIRTDEWLGYRRTASEAEVL AEMACKWVLPPGAHGHIPNVAMVDGSLVYWFLENLPAEARQQILEPLLGAWQQLRETRIPLIGYISSTRSVEAVHFLRLQ ACPHDKPDCQTHCLDGETKERKPEFRETLPCQTIEPLRDSTLFEQLLQPGDRSGLWLSQARILNHYPEADQVCFCYLHVG TEVARIEMPRWVAADPQLLDQTLGIVLGQVQKGFGYPVAIAEAHNQAVIRGGDRARFFALLEQQLLKAGLTNVGVSYKET RKRGSVA
Sequences:
>Translated_407_residues MLDLIKLAGQLPDMGAHLQEQAATGRERIERGLSLLQEAQADFQTLQAHQNTWGDRLIFNHGIPLESLETRVPISPPSQA HTVFATDGSQIAPSHHEIAYCYLINIGRVMLHYGQSLHPLLDHLPEIFYRSEDLYTSRKWGIRTDEWLGYRRTASEAEVL AEMACKWVLPPGAHGHIPNVAMVDGSLVYWFLENLPAEARQQILEPLLGAWQQLRETRIPLIGYISSTRSVEAVHFLRLQ ACPHDKPDCQTHCLDGETKERKPEFRETLPCQTIEPLRDSTLFEQLLQPGDRSGLWLSQARILNHYPEADQVCFCYLHVG TEVARIEMPRWVAADPQLLDQTLGIVLGQVQKGFGYPVAIAEAHNQAVIRGGDRARFFALLEQQLLKAGLTNVGVSYKET RKRGSVA >Mature_407_residues MLDLIKLAGQLPDMGAHLQEQAATGRERIERGLSLLQEAQADFQTLQAHQNTWGDRLIFNHGIPLESLETRVPISPPSQA HTVFATDGSQIAPSHHEIAYCYLINIGRVMLHYGQSLHPLLDHLPEIFYRSEDLYTSRKWGIRTDEWLGYRRTASEAEVL AEMACKWVLPPGAHGHIPNVAMVDGSLVYWFLENLPAEARQQILEPLLGAWQQLRETRIPLIGYISSTRSVEAVHFLRLQ ACPHDKPDCQTHCLDGETKERKPEFRETLPCQTIEPLRDSTLFEQLLQPGDRSGLWLSQARILNHYPEADQVCFCYLHVG TEVARIEMPRWVAADPQLLDQTLGIVLGQVQKGFGYPVAIAEAHNQAVIRGGDRARFFALLEQQLLKAGLTNVGVSYKET RKRGSVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45897; Mature: 45897
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLIKLAGQLPDMGAHLQEQAATGRERIERGLSLLQEAQADFQTLQAHQNTWGDRLIFN CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE HGIPLESLETRVPISPPSQAHTVFATDGSQIAPSHHEIAYCYLINIGRVMLHYGQSLHPL CCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHH LDHLPEIFYRSEDLYTSRKWGIRTDEWLGYRRTASEAEVLAEMACKWVLPPGAHGHIPNV HHHHHHHHCCCCHHCCCCCCCCCCHHHCCCHHCHHHHHHHHHHHHHCCCCCCCCCCCCCE AMVDGSLVYWFLENLPAEARQQILEPLLGAWQQLRETRIPLIGYISSTRSVEAVHFLRLQ EEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH ACPHDKPDCQTHCLDGETKERKPEFRETLPCQTIEPLRDSTLFEQLLQPGDRSGLWLSQA CCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH RILNHYPEADQVCFCYLHVGTEVARIEMPRWVAADPQLLDQTLGIVLGQVQKGFGYPVAI HHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE AEAHNQAVIRGGDRARFFALLEQQLLKAGLTNVGVSYKETRKRGSVA ECCCCCEEEECCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHCCCCC >Mature Secondary Structure MLDLIKLAGQLPDMGAHLQEQAATGRERIERGLSLLQEAQADFQTLQAHQNTWGDRLIFN CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE HGIPLESLETRVPISPPSQAHTVFATDGSQIAPSHHEIAYCYLINIGRVMLHYGQSLHPL CCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHH LDHLPEIFYRSEDLYTSRKWGIRTDEWLGYRRTASEAEVLAEMACKWVLPPGAHGHIPNV HHHHHHHHCCCCHHCCCCCCCCCCHHHCCCHHCHHHHHHHHHHHHHCCCCCCCCCCCCCE AMVDGSLVYWFLENLPAEARQQILEPLLGAWQQLRETRIPLIGYISSTRSVEAVHFLRLQ EEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH ACPHDKPDCQTHCLDGETKERKPEFRETLPCQTIEPLRDSTLFEQLLQPGDRSGLWLSQA CCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH RILNHYPEADQVCFCYLHVGTEVARIEMPRWVAADPQLLDQTLGIVLGQVQKGFGYPVAI HHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE AEAHNQAVIRGGDRARFFALLEQQLLKAGLTNVGVSYKETRKRGSVA ECCCCCEEEECCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA