| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078033
Identifier: 170078033
GI number: 170078033
Start: 1496349
End: 1498064
Strand: Direct
Name: 170078033
Synonym: SYNPCC7002_A1424
Alternate gene names: NA
Gene position: 1496349-1498064 (Clockwise)
Preceding gene: 170078031
Following gene: 170078034
Centisome position: 49.74
GC content: 36.13
Gene sequence:
>1716_bases TTGACTCGCTCAAAAAAAGTATGTGATCGCACTACTCTATTCTGGCTTCTATTCGCACTATTTCTTGGCCTTCTATATCC AATTTTAGCCCTGACTAAAATTTCCGGAGAGCTTCACTGGATACAAGATGATGCTCGACAACATATTTTTTGGATGGCGA GATTTTTAGATCCAGAATTATTTTCCGATGATTTAATTGCGGATTATTACAACTCAATTTCTCCAGCCGGCGTATCTTTT TTTTATTATTGTCTTGCTAAATTGGGTGTTGACCCTGATTTCTTATCTAAAATAGTACCTTTGTTACTCAGTCCTCTGAC AGTATTTTTAAGTTTTATCCTTTGCTTAGAAATATTACCAATTCCCTTTGCTGCTTTTCTGTCTAGTACAGTTCTGATAC AAAATCTCTGGCTTCAAGACGGACTAACTTCCGGAACTGCGAAAGCTTTTTTGATTCCTATTTTTTTATTATTTCTTTGG GCAGTAATACGTAAGTCTTTTTTCTGGACAATAGGATCAATAGTTTTTCTAGGATTGTTTTATGGATCTTTTGTGTTAGT TGCAGCAGGAGTCTTAGTCTGTCAATACTTTACTCTAAATCAAGGAAAACTTCAGCTTAACTACAATCGTCATGATAAAA ATTTAGCAATTTCTGGATTGCTAGTTGCCTTTGTCGTGTTATTGCCCCACATCCTTAGTAATTCTGACTTCGAACCTGTA ATCTCCCTTACTCAAGCAAAACAACTGCCAGAATTTGAACCAGGAGGAAGAGCAAGTTTTTTTCAAACTAACTGGTGGGA TTACCTTTTCAATGGTGGTCGTACAGGGATTCGTCTTACTGCGGCATTACGACCTGATTTAGTCTATATTTCTTTATTAT TGCCGATTATTTTTTTATATAAAAAACATTTTCCTTTAACTCAAGACATTCGCCGATTGTTTGTGTTGAACCAACTACTA ATTAGCGGATTTGTCCTATACACATTGGCTCATTTATTCCTATTTAAACTTTATTTGCCTAGTCGTTATAGTTTGCATAG TTTGCGTTTTAGTTTAACCATTCTTTGTGGTCTGACTTTGGTGATTTTATTGGATAAGCTAGTTCGTTTATGTCGAGAAA GATCTTTAAGGACTGTGCGGCTAGTCTTTCTGGTATTTGCTTTGTTTTCTATTGCTTTTTCTTTACTTGTTGATCCATTA ACTGATAAAGACTTTCCTAGTACTGGATATATCACTGGGAAATATCATAATTTATATCAATTTTTACAACAAACTCCAAA AGATACCCTGGTTGCTTCTTTTGCCGATGAGGCCAGCAACATACCATCTTTCTCGCAACGGAGTGTATTCGTAGCGGCAG AATATGGCATCCCTTACCATGTGGGATATTATGACCAGTTTCGCCAACGTACTCAGGATTTAATTACAGCCCATTACAAT ATTGATCCCACAGTACTGCAGAGATTTATTTATGATTCAAAAATTGATTTATGGTTGGTTAATTCTGATGTTTTTAGCGT CAAATTCTTAGAAGCGAATCGATGGTTTAACCATTTCCAACCTCAAGCCAGCAATGCTATTCATCAAGTTAAGTTAAATA AAGAGGCGATCGCTCTGTGGCAAGTCCAAAAACAATGCACCATCTTTACTGATCAAGATATAAATGTAGTGAGCTCGGAC TGCATCCTAGACTGGATTTCTAAAGAGCTAAACTAG
Upstream 100 bases:
>100_bases TCAGGTACTACTGCCATCACAGAATAAGTCTAAAGTTAATTGTTTATTTTGCTAATTATAAATGAGTTTAAACCTGTTAG ATCGAGTCAGTCAATTTTTA
Downstream 100 bases:
>100_bases CCTTACCTGCATTATTTGATTAGTGTTAGACTTAGAATGAACTTAATAAAAGTTAATAAAACCTGTTCTAGGGTATGACT TCCATCTTTCCAAACAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 571; Mature: 570
Protein sequence:
>571_residues MTRSKKVCDRTTLFWLLFALFLGLLYPILALTKISGELHWIQDDARQHIFWMARFLDPELFSDDLIADYYNSISPAGVSF FYYCLAKLGVDPDFLSKIVPLLLSPLTVFLSFILCLEILPIPFAAFLSSTVLIQNLWLQDGLTSGTAKAFLIPIFLLFLW AVIRKSFFWTIGSIVFLGLFYGSFVLVAAGVLVCQYFTLNQGKLQLNYNRHDKNLAISGLLVAFVVLLPHILSNSDFEPV ISLTQAKQLPEFEPGGRASFFQTNWWDYLFNGGRTGIRLTAALRPDLVYISLLLPIIFLYKKHFPLTQDIRRLFVLNQLL ISGFVLYTLAHLFLFKLYLPSRYSLHSLRFSLTILCGLTLVILLDKLVRLCRERSLRTVRLVFLVFALFSIAFSLLVDPL TDKDFPSTGYITGKYHNLYQFLQQTPKDTLVASFADEASNIPSFSQRSVFVAAEYGIPYHVGYYDQFRQRTQDLITAHYN IDPTVLQRFIYDSKIDLWLVNSDVFSVKFLEANRWFNHFQPQASNAIHQVKLNKEAIALWQVQKQCTIFTDQDINVVSSD CILDWISKELN
Sequences:
>Translated_571_residues MTRSKKVCDRTTLFWLLFALFLGLLYPILALTKISGELHWIQDDARQHIFWMARFLDPELFSDDLIADYYNSISPAGVSF FYYCLAKLGVDPDFLSKIVPLLLSPLTVFLSFILCLEILPIPFAAFLSSTVLIQNLWLQDGLTSGTAKAFLIPIFLLFLW AVIRKSFFWTIGSIVFLGLFYGSFVLVAAGVLVCQYFTLNQGKLQLNYNRHDKNLAISGLLVAFVVLLPHILSNSDFEPV ISLTQAKQLPEFEPGGRASFFQTNWWDYLFNGGRTGIRLTAALRPDLVYISLLLPIIFLYKKHFPLTQDIRRLFVLNQLL ISGFVLYTLAHLFLFKLYLPSRYSLHSLRFSLTILCGLTLVILLDKLVRLCRERSLRTVRLVFLVFALFSIAFSLLVDPL TDKDFPSTGYITGKYHNLYQFLQQTPKDTLVASFADEASNIPSFSQRSVFVAAEYGIPYHVGYYDQFRQRTQDLITAHYN IDPTVLQRFIYDSKIDLWLVNSDVFSVKFLEANRWFNHFQPQASNAIHQVKLNKEAIALWQVQKQCTIFTDQDINVVSSD CILDWISKELN >Mature_570_residues TRSKKVCDRTTLFWLLFALFLGLLYPILALTKISGELHWIQDDARQHIFWMARFLDPELFSDDLIADYYNSISPAGVSFF YYCLAKLGVDPDFLSKIVPLLLSPLTVFLSFILCLEILPIPFAAFLSSTVLIQNLWLQDGLTSGTAKAFLIPIFLLFLWA VIRKSFFWTIGSIVFLGLFYGSFVLVAAGVLVCQYFTLNQGKLQLNYNRHDKNLAISGLLVAFVVLLPHILSNSDFEPVI SLTQAKQLPEFEPGGRASFFQTNWWDYLFNGGRTGIRLTAALRPDLVYISLLLPIIFLYKKHFPLTQDIRRLFVLNQLLI SGFVLYTLAHLFLFKLYLPSRYSLHSLRFSLTILCGLTLVILLDKLVRLCRERSLRTVRLVFLVFALFSIAFSLLVDPLT DKDFPSTGYITGKYHNLYQFLQQTPKDTLVASFADEASNIPSFSQRSVFVAAEYGIPYHVGYYDQFRQRTQDLITAHYNI DPTVLQRFIYDSKIDLWLVNSDVFSVKFLEANRWFNHFQPQASNAIHQVKLNKEAIALWQVQKQCTIFTDQDINVVSSDC ILDWISKELN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65620; Mature: 65489
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSKKVCDRTTLFWLLFALFLGLLYPILALTKISGELHWIQDDARQHIFWMARFLDPEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCHHH FSDDLIADYYNSISPAGVSFFYYCLAKLGVDPDFLSKIVPLLLSPLTVFLSFILCLEILP CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPFAAFLSSTVLIQNLWLQDGLTSGTAKAFLIPIFLLFLWAVIRKSFFWTIGSIVFLGLF CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGSFVLVAAGVLVCQYFTLNQGKLQLNYNRHDKNLAISGLLVAFVVLLPHILSNSDFEPV HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH ISLTQAKQLPEFEPGGRASFFQTNWWDYLFNGGRTGIRLTAALRPDLVYISLLLPIIFLY HHHHHHHCCCCCCCCCCCCCEECCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHH KKHFPLTQDIRRLFVLNQLLISGFVLYTLAHLFLFKLYLPSRYSLHSLRFSLTILCGLTL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VILLDKLVRLCRERSLRTVRLVFLVFALFSIAFSLLVDPLTDKDFPSTGYITGKYHNLYQ HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHH FLQQTPKDTLVASFADEASNIPSFSQRSVFVAAEYGIPYHVGYYDQFRQRTQDLITAHYN HHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHCCC IDPTVLQRFIYDSKIDLWLVNSDVFSVKFLEANRWFNHFQPQASNAIHQVKLNKEAIALW CCHHHHHHHHHCCCCEEEEECCCEEEEEEEEHHHHHHHCCCHHHCCHHHEEECHHHHHHH QVQKQCTIFTDQDINVVSSDCILDWISKELN HHHHCCEEEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TRSKKVCDRTTLFWLLFALFLGLLYPILALTKISGELHWIQDDARQHIFWMARFLDPEL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCHHH FSDDLIADYYNSISPAGVSFFYYCLAKLGVDPDFLSKIVPLLLSPLTVFLSFILCLEILP CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPFAAFLSSTVLIQNLWLQDGLTSGTAKAFLIPIFLLFLWAVIRKSFFWTIGSIVFLGLF CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGSFVLVAAGVLVCQYFTLNQGKLQLNYNRHDKNLAISGLLVAFVVLLPHILSNSDFEPV HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH ISLTQAKQLPEFEPGGRASFFQTNWWDYLFNGGRTGIRLTAALRPDLVYISLLLPIIFLY HHHHHHHCCCCCCCCCCCCCEECCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHH KKHFPLTQDIRRLFVLNQLLISGFVLYTLAHLFLFKLYLPSRYSLHSLRFSLTILCGLTL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VILLDKLVRLCRERSLRTVRLVFLVFALFSIAFSLLVDPLTDKDFPSTGYITGKYHNLYQ HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHH FLQQTPKDTLVASFADEASNIPSFSQRSVFVAAEYGIPYHVGYYDQFRQRTQDLITAHYN HHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHCCC IDPTVLQRFIYDSKIDLWLVNSDVFSVKFLEANRWFNHFQPQASNAIHQVKLNKEAIALW CCHHHHHHHHHCCCCEEEEECCCEEEEEEEEHHHHHHHCCCHHHCCHHHEEECHHHHHHH QVQKQCTIFTDQDINVVSSDCILDWISKELN HHHHCCEEEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA