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The map label for this gene is nifU [H]

Identifier: 170078022

GI number: 170078022

Start: 1482231

End: 1482467

Strand: Direct

Name: nifU [H]

Synonym: SYNPCC7002_A1413

Alternate gene names: 170078022

Gene position: 1482231-1482467 (Clockwise)

Preceding gene: 170078016

Following gene: 170078025

Centisome position: 49.28

GC content: 50.63

Gene sequence:

>237_bases
ATGGCATTAGCACTCACGACCGAAAACGTCGAAGCAACCCTTGATGAATTACGTCCTTACCTCAAAGCTGACGGCGGCAA
CGTTGAGTTGGTAGAGATTGATGGCCCCGTGGTTAAACTGCGTCTCCAGGGCGCTTGTGGGTCTTGCCCCAGTTCAACCA
TGACCCTACGGATGGGCATCGAACGGCGTTTACGGGAAAATATTCCGGAAATTGCAGAAGTAGAACAGGTTTTCTAA

Upstream 100 bases:

>100_bases
ACATTATCGCCTCAAAGTCTACTGGAGAGCATTTTCTTTGCAAAGGAATAAAACGGAAACTTTATAATAGAAGGCGATCC
CTTCGTTCACCAAAAGAATT

Downstream 100 bases:

>100_bases
ATCGTTTTTCACTTTCTTTAGGGTTGTAGGGGTTTGCCATGGTGAACCCCTACTTTATGTTTACAGGGCTGTTTGAGATC
AACCCGTGTTCCGCATTCCG

Product: NifU like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MALALTTENVEATLDELRPYLKADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGIERRLRENIPEIAEVEQVF

Sequences:

>Translated_78_residues
MALALTTENVEATLDELRPYLKADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGIERRLRENIPEIAEVEQVF
>Mature_77_residues
ALALTTENVEATLDELRPYLKADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGIERRLRENIPEIAEVEQVF

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17541876, Length=61, Percent_Identity=47.5409836065574, Blast_Score=65, Evalue=9e-12,
Organism=Drosophila melanogaster, GI45551492, Length=62, Percent_Identity=48.3870967741936, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24643765, Length=62, Percent_Identity=48.3870967741936, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45556188, Length=62, Percent_Identity=48.3870967741936, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 8559; Mature: 8428

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALALTTENVEATLDELRPYLKADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGI
CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEHHH
ERRLRENIPEIAEVEQVF
HHHHHHCCCCHHHHHHCC
>Mature Secondary Structure 
ALALTTENVEATLDELRPYLKADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGI
EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEHHH
ERRLRENIPEIAEVEQVF
HHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8424961 [H]