| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078025
Identifier: 170078025
GI number: 170078025
Start: 1486095
End: 1488758
Strand: Direct
Name: 170078025
Synonym: SYNPCC7002_A1416
Alternate gene names: NA
Gene position: 1486095-1488758 (Clockwise)
Preceding gene: 170078022
Following gene: 170078027
Centisome position: 49.4
GC content: 53.08
Gene sequence:
>2664_bases TTGCGGGTGCGACTGCGGGGGAATACGCTCCACATCCTCTGTGAAACCAGTTGTCCCACGGAAAAAGAAGAGATTACCCA AGCCATTTTACGGAGAATGCGCCGTCAACCTCCCCCTGTGCAACTCCTAGAGCCGACCCCTGGAATCACAATTCACCGTC TCATTGTCTATGGTCGCCTCCGCCAAGAGAAAAAAAGCCTCTGGTTAAGCCTAATTCCCCTGGGTCAGTCGTCCCCATCG TCGAACCCGGAGACGTTCCAGCTCAATCGAAAAAATCAGGCCCGCCTCGGTTATCCCCAGGCGATCGCCCAATATTTAAG TCAAAATCTCAGCCAATTGGGCATTAATATTCGGGTTGAAACCCAGACCCTAGCGAATACAGCCCCCCACCAAGGGCAAC AGCGTCTCTGGATTACCTGTGAATGTGACTACAGCCCGGACTATGGCTTGCTGACAGAATCTCTGGTGCAGCGACTCCGG GAACTGGAAATCAAAGGTTTTCGCGATGGGGCAATCCGCTGTCAAATTCGTGGGGAAGAAAAGCCAGAATGGTTGCTATG GGTTGATCTGACGCCCCCCGATGTCATGTTGCGGCAGTGGGGCCAATGGGGAGATCCTGAGGCGATCTCCCAGATTTTGA CCCAGTCATTCCAAGCCCACCCCCTCACCATTCGGGCGGCTGTAACCGATGCCGTGTTGTCCCTGGAGTGCATCCTGGCC CCCAATATTTCCCTAGCCCAGGCCCACATTCTCAAGACCATCCAAGACATTCTCGACGTCCTCGCGCCCCAGGGGTTACA GCGCGCGCTAATCCGGGCGAAATCAGCTCCCCACAATGAAGAACTCTGGCGCAGTGAATGGTCGTTGCCAGGGGTACACC ATGATTCTCCCGGACAGTTGGCCCAACAGGGGGATTTGGAGGCGTGGCGGTTTTTGCTCCAACGTTGCCTGAATCCTGAT CTGACAAGACGTTTAGCCACTGGCGGCATCCACATTACCCTCCGCCAAAAGGATGACACCCTCTACATCATGACGGAGGC GATCGCCTGTCCACCCCAAATGGCAACGCTCAAGGCGATCGCCACTCTTTTTCGGCATTTAGAACCCCATCCCTTTAGTC GTCTAAAGGTCTATGGCCGCCGTTCGGGCCAAAGCAAAGCCCTCTGGCAACAATCATTAAAATTCAACACCATTACCCCA GCCAGGACATCACCACAGACGCCAACGGAAACCGCCCTTCCCCCCGTCGAAACTGACCCCAGTCTTTCTCCCCTAGAACG CTTCAACCAAGGTGCCCGTAATCTCCTCCAGCGTAGTCGCCTCTGGCAGCCAATACCGGATAATTGTGGTCTGGTTTTAC ACCAGGGTGAATCCGAGCGAAACGTCTTTTCCCCGCAGCGGCGGTGGCGAGTGGCTTGCCTGTGGCTGCTGGGCGGCATT TTAGTCACGGCCCAAACCGATTGGTTGGCGGGCCAATGGCTCCGGCGGGATCTGGCTCAACCCCAATCTGTGTCCCTGTC CCAAACCGATCCAGCAACCCGCTCAGAGGTCTTAGATGCCCAGCTTCCAGTCACCAATTGGCCAACCACGGCCCCAAAGG CGATCGCCCCTCCCCTAACTAGCCCCTATCCTTCCTTTGATAATCCGCTCCTAGACGAAAAACTCGCCCTCTACCAAGAG CGCATCGCCAAAAATGGTGTACCTGACGTTCTTATTATTGGTAGTTCCCGTGCCCTGCGTGGCCTCGATCCCCTGGCCCT GCAAATGGCCCTCACCGAGAAAGGCCATCCGCCCCTTGATATTTTTAATTTCGGGATTAATGGTGCCACTGTCCAGATCT TTGATCTACTGCTGCGGCAAATTCTCCCTCCGGAGCAACTGCCCCAGTTAATTATCCTTGCCGACGGAGCCCGTGCTTTT AATAGCGGTCGGCAGGATTTGACCTACGAACTGATGACCCGTTCCCCAGGTTTCCAAGCCCTTGAAGCAGGTACATTTTC TCAACTGTTGTCTCAAGATATCCCCAAACATCAGGCAATAACTTCTGTTGTTCCTGATCTAGAACAAATCACCACCCAAT GGCTGGGAAAAATCTCCCAGGTCTATGATCAGCGACAATTTTTCAAAGAACGCTTTTTTGACGAAACCCTAGCGCCATTC CACACCTGGGTGTCTACAGCAGAGGCAGCATCCCCGATGATTTCTACTGAGTCAGGGCAGCAGTTTAATTTAGATGGTTT TTTGCCCCTCGACCGTCGCTTCATTCCAGAAACTTACTACCAAAATCACACCCAAGTCACGGGAAATTATGACGGGGATT ATGCGGCGTTTAATCTCCGGGGAACGCAACACGAAACCTTCTTAGAGCTTTTAGATCATTTCGAGTCTCACCAAATTCAC TTGGTCTTCTTGAATCAGCCCCTGACGGATTACTACCTCGATCCGGTACGTCTGGATTATGAACGGCAGTTTCGCCAGTA TTTTCGTCAATTGGCTAATCGAGACAAGCTTGATTTCGTTGATTTTGTCCACCAACAAGCCTGGCAAGGCCGTTATGAAT GGTTTTCGGATCCGAGCCATCTCAATCAGTTTGGTGCGGCGCAAGTGGCCCAAGAACTAGCTAAAGTTTCGACGATTCCC TGGCCACAACGTACTTCAGACTAA
Upstream 100 bases:
>100_bases TACTGTGACAACTGCAACCTCCACGGATCTTCACTTTCATTTAGCACCCTGGCTCCAGGATGCCATTCGCCTGGCGGTGC CCCTGGGAGGGTATCTGCGG
Downstream 100 bases:
>100_bases TTTTCTTCTGATTTTTTTCAGGACAAGGCTTCGGTCTCTGTTAATGCTCGACGATGGCGCTCAACGACCTGTTTCACCTG GGAAGCTAGCCATCCATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 887; Mature: 887
Protein sequence:
>887_residues MRVRLRGNTLHILCETSCPTEKEEITQAILRRMRRQPPPVQLLEPTPGITIHRLIVYGRLRQEKKSLWLSLIPLGQSSPS SNPETFQLNRKNQARLGYPQAIAQYLSQNLSQLGINIRVETQTLANTAPHQGQQRLWITCECDYSPDYGLLTESLVQRLR ELEIKGFRDGAIRCQIRGEEKPEWLLWVDLTPPDVMLRQWGQWGDPEAISQILTQSFQAHPLTIRAAVTDAVLSLECILA PNISLAQAHILKTIQDILDVLAPQGLQRALIRAKSAPHNEELWRSEWSLPGVHHDSPGQLAQQGDLEAWRFLLQRCLNPD LTRRLATGGIHITLRQKDDTLYIMTEAIACPPQMATLKAIATLFRHLEPHPFSRLKVYGRRSGQSKALWQQSLKFNTITP ARTSPQTPTETALPPVETDPSLSPLERFNQGARNLLQRSRLWQPIPDNCGLVLHQGESERNVFSPQRRWRVACLWLLGGI LVTAQTDWLAGQWLRRDLAQPQSVSLSQTDPATRSEVLDAQLPVTNWPTTAPKAIAPPLTSPYPSFDNPLLDEKLALYQE RIAKNGVPDVLIIGSSRALRGLDPLALQMALTEKGHPPLDIFNFGINGATVQIFDLLLRQILPPEQLPQLIILADGARAF NSGRQDLTYELMTRSPGFQALEAGTFSQLLSQDIPKHQAITSVVPDLEQITTQWLGKISQVYDQRQFFKERFFDETLAPF HTWVSTAEAASPMISTESGQQFNLDGFLPLDRRFIPETYYQNHTQVTGNYDGDYAAFNLRGTQHETFLELLDHFESHQIH LVFLNQPLTDYYLDPVRLDYERQFRQYFRQLANRDKLDFVDFVHQQAWQGRYEWFSDPSHLNQFGAAQVAQELAKVSTIP WPQRTSD
Sequences:
>Translated_887_residues MRVRLRGNTLHILCETSCPTEKEEITQAILRRMRRQPPPVQLLEPTPGITIHRLIVYGRLRQEKKSLWLSLIPLGQSSPS SNPETFQLNRKNQARLGYPQAIAQYLSQNLSQLGINIRVETQTLANTAPHQGQQRLWITCECDYSPDYGLLTESLVQRLR ELEIKGFRDGAIRCQIRGEEKPEWLLWVDLTPPDVMLRQWGQWGDPEAISQILTQSFQAHPLTIRAAVTDAVLSLECILA PNISLAQAHILKTIQDILDVLAPQGLQRALIRAKSAPHNEELWRSEWSLPGVHHDSPGQLAQQGDLEAWRFLLQRCLNPD LTRRLATGGIHITLRQKDDTLYIMTEAIACPPQMATLKAIATLFRHLEPHPFSRLKVYGRRSGQSKALWQQSLKFNTITP ARTSPQTPTETALPPVETDPSLSPLERFNQGARNLLQRSRLWQPIPDNCGLVLHQGESERNVFSPQRRWRVACLWLLGGI LVTAQTDWLAGQWLRRDLAQPQSVSLSQTDPATRSEVLDAQLPVTNWPTTAPKAIAPPLTSPYPSFDNPLLDEKLALYQE RIAKNGVPDVLIIGSSRALRGLDPLALQMALTEKGHPPLDIFNFGINGATVQIFDLLLRQILPPEQLPQLIILADGARAF NSGRQDLTYELMTRSPGFQALEAGTFSQLLSQDIPKHQAITSVVPDLEQITTQWLGKISQVYDQRQFFKERFFDETLAPF HTWVSTAEAASPMISTESGQQFNLDGFLPLDRRFIPETYYQNHTQVTGNYDGDYAAFNLRGTQHETFLELLDHFESHQIH LVFLNQPLTDYYLDPVRLDYERQFRQYFRQLANRDKLDFVDFVHQQAWQGRYEWFSDPSHLNQFGAAQVAQELAKVSTIP WPQRTSD >Mature_887_residues MRVRLRGNTLHILCETSCPTEKEEITQAILRRMRRQPPPVQLLEPTPGITIHRLIVYGRLRQEKKSLWLSLIPLGQSSPS SNPETFQLNRKNQARLGYPQAIAQYLSQNLSQLGINIRVETQTLANTAPHQGQQRLWITCECDYSPDYGLLTESLVQRLR ELEIKGFRDGAIRCQIRGEEKPEWLLWVDLTPPDVMLRQWGQWGDPEAISQILTQSFQAHPLTIRAAVTDAVLSLECILA PNISLAQAHILKTIQDILDVLAPQGLQRALIRAKSAPHNEELWRSEWSLPGVHHDSPGQLAQQGDLEAWRFLLQRCLNPD LTRRLATGGIHITLRQKDDTLYIMTEAIACPPQMATLKAIATLFRHLEPHPFSRLKVYGRRSGQSKALWQQSLKFNTITP ARTSPQTPTETALPPVETDPSLSPLERFNQGARNLLQRSRLWQPIPDNCGLVLHQGESERNVFSPQRRWRVACLWLLGGI LVTAQTDWLAGQWLRRDLAQPQSVSLSQTDPATRSEVLDAQLPVTNWPTTAPKAIAPPLTSPYPSFDNPLLDEKLALYQE RIAKNGVPDVLIIGSSRALRGLDPLALQMALTEKGHPPLDIFNFGINGATVQIFDLLLRQILPPEQLPQLIILADGARAF NSGRQDLTYELMTRSPGFQALEAGTFSQLLSQDIPKHQAITSVVPDLEQITTQWLGKISQVYDQRQFFKERFFDETLAPF HTWVSTAEAASPMISTESGQQFNLDGFLPLDRRFIPETYYQNHTQVTGNYDGDYAAFNLRGTQHETFLELLDHFESHQIH LVFLNQPLTDYYLDPVRLDYERQFRQYFRQLANRDKLDFVDFVHQQAWQGRYEWFSDPSHLNQFGAAQVAQELAKVSTIP WPQRTSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100978; Mature: 100978
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRLRGNTLHILCETSCPTEKEEITQAILRRMRRQPPPVQLLEPTPGITIHRLIVYGRL CEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHH RQEKKSLWLSLIPLGQSSPSSNPETFQLNRKNQARLGYPQAIAQYLSQNLSQLGINIRVE HHHHHHHEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE TQTLANTAPHQGQQRLWITCECDYSPDYGLLTESLVQRLRELEIKGFRDGAIRCQIRGEE HHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC KPEWLLWVDLTPPDVMLRQWGQWGDPEAISQILTQSFQAHPLTIRAAVTDAVLSLECILA CCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHEEEEEC PNISLAQAHILKTIQDILDVLAPQGLQRALIRAKSAPHNEELWRSEWSLPGVHHDSPGQL CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCH AQQGDLEAWRFLLQRCLNPDLTRRLATGGIHITLRQKDDTLYIMTEAIACPPQMATLKAI HHCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCEEEEEEHHHCCCCHHHHHHHH ATLFRHLEPHPFSRLKVYGRRSGQSKALWQQSLKFNTITPARTSPQTPTETALPPVETDP HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLSPLERFNQGARNLLQRSRLWQPIPDNCGLVLHQGESERNVFSPQRRWRVACLWLLGGI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHE LVTAQTDWLAGQWLRRDLAQPQSVSLSQTDPATRSEVLDAQLPVTNWPTTAPKAIAPPLT EEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC SPYPSFDNPLLDEKLALYQERIAKNGVPDVLIIGSSRALRGLDPLALQMALTEKGHPPLD CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCE IFNFGINGATVQIFDLLLRQILPPEQLPQLIILADGARAFNSGRQDLTYELMTRSPGFQA EEECCCCCHHHHHHHHHHHHHCCHHHCCCEEEEECCCHHHCCCCHHCCHHHHHCCCCCHH LEAGTFSQLLSQDIPKHQAITSVVPDLEQITTQWLGKISQVYDQRQFFKERFFDETLAPF HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTWVSTAEAASPMISTESGQQFNLDGFLPLDRRFIPETYYQNHTQVTGNYDGDYAAFNLR HHHHHHHHHCCCCEECCCCCEECCCCCCCCCHHHCCHHHHCCCCEEECCCCCCEEEEEEC GTQHETFLELLDHFESHQIHLVFLNQPLTDYYLDPVRLDYERQFRQYFRQLANRDKLDFV CCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCEECHHHHHHHHHHHHHCCCCCHHH DFVHQQAWQGRYEWFSDPSHLNQFGAAQVAQELAKVSTIPWPQRTSD HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRVRLRGNTLHILCETSCPTEKEEITQAILRRMRRQPPPVQLLEPTPGITIHRLIVYGRL CEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHH RQEKKSLWLSLIPLGQSSPSSNPETFQLNRKNQARLGYPQAIAQYLSQNLSQLGINIRVE HHHHHHHEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE TQTLANTAPHQGQQRLWITCECDYSPDYGLLTESLVQRLRELEIKGFRDGAIRCQIRGEE HHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC KPEWLLWVDLTPPDVMLRQWGQWGDPEAISQILTQSFQAHPLTIRAAVTDAVLSLECILA CCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHEEEEEC PNISLAQAHILKTIQDILDVLAPQGLQRALIRAKSAPHNEELWRSEWSLPGVHHDSPGQL CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCH AQQGDLEAWRFLLQRCLNPDLTRRLATGGIHITLRQKDDTLYIMTEAIACPPQMATLKAI HHCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCEEEEEEHHHCCCCHHHHHHHH ATLFRHLEPHPFSRLKVYGRRSGQSKALWQQSLKFNTITPARTSPQTPTETALPPVETDP HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLSPLERFNQGARNLLQRSRLWQPIPDNCGLVLHQGESERNVFSPQRRWRVACLWLLGGI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHE LVTAQTDWLAGQWLRRDLAQPQSVSLSQTDPATRSEVLDAQLPVTNWPTTAPKAIAPPLT EEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC SPYPSFDNPLLDEKLALYQERIAKNGVPDVLIIGSSRALRGLDPLALQMALTEKGHPPLD CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCE IFNFGINGATVQIFDLLLRQILPPEQLPQLIILADGARAFNSGRQDLTYELMTRSPGFQA EEECCCCCHHHHHHHHHHHHHCCHHHCCCEEEEECCCHHHCCCCHHCCHHHHHCCCCCHH LEAGTFSQLLSQDIPKHQAITSVVPDLEQITTQWLGKISQVYDQRQFFKERFFDETLAPF HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTWVSTAEAASPMISTESGQQFNLDGFLPLDRRFIPETYYQNHTQVTGNYDGDYAAFNLR HHHHHHHHHCCCCEECCCCCEECCCCCCCCCHHHCCHHHHCCCCEEECCCCCCEEEEEEC GTQHETFLELLDHFESHQIHLVFLNQPLTDYYLDPVRLDYERQFRQYFRQLANRDKLDFV CCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCEECHHHHHHHHHHHHHCCCCCHHH DFVHQQAWQGRYEWFSDPSHLNQFGAAQVAQELAKVSTIPWPQRTSD HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA