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The map label for this gene is ybhN [C]

Identifier: 170078016

GI number: 170078016

Start: 1475055

End: 1476017

Strand: Direct

Name: ybhN [C]

Synonym: SYNPCC7002_A1407

Alternate gene names: 170078016

Gene position: 1475055-1476017 (Clockwise)

Preceding gene: 170078013

Following gene: 170078022

Centisome position: 49.04

GC content: 42.26

Gene sequence:

>963_bases
GTGATAGATCGTAAAAGTGACCGTCAAAGATTTTTTAAAAAGCATTTTCTATCGGGCATAAGTCTCGTCATTTGTGCGGT
GGCAGTGGGGGTGATTTGGCAGGAATTTCGACGTATTAATTGGCCCCTTGTCTGGGAAAATTTGAATCACCTTTCTGGAG
CTCAGTTAGGACTAGCAAGCTTTTTTGTGGTGTGTAGTTACGGGGCGATCGCCAATTATGATCTTTTGGCATTTCGATAT
CTCCAAAAAACTTTAGATACCTATAAAATCGCCTTTACAGGGTTGATCACCTATGCCATTAGTCCAAACGTGGGTTTTGC
GTTTCTGTCGGGGAGTATGTTGCGCTACCGCCTCTATCGTCAGTGGCAAGTGTCCCATTTAGAAATTGCTCAGGTTATTG
CCTTTACCAATTTAAGTTTGTGGGTCGGGTTATTGCCCATTAGTGGCATTATTTTTACGATTTTTAAGTTTCCCCTACCA
ACGGGCATTCAATTGCCTTTTTTTGCACAATCACTACAGGGATTTGGCATTCTTTGTTTAGGGATTAGTGCTTTATATGT
GTTGGGTTCTTGTGTATTTAAAAAGCCATTGCAGTGGCGTAATTATCAGTTTAAATTTCCTTCATTAAAACTTTCTCTTC
AGCAGGTTTTTGTATTTAGTTTGGATTGGGGATTTGCCGCTCTAGCACTGCATTCTCTGTTGGCGCCCCCCCTCAATTAT
CCTGTTTTTTTCGGAGTTTATGTACTAGCGATGGTTGCCGGCTTAGTGAGTACAATTCCCGGTGGTTTGGGGATTTTCGA
GACGGTGATTCTCTTTTTCTTGCAAGACACCCAGCCAGAGGAGGTCATTTTAGCCACCTTAATTGTTTTTCGGGGTCTGT
ACTATTTATTGCCTTTTGCGATCGCCGTTGCCGCTTTACTGTTGTTTGAATATCGCCAAACCCGTAAACCTAAGCAGTTC
TAG

Upstream 100 bases:

>100_bases
TCTATCGGAAGAGATTCCCCCATTGGAGGCTATGGTAAAGTTCTGGCAATGGTGAGGGCAGACAAAATGAACTTTGGCAA
AATATTTTTGGGTTAGCCCA

Downstream 100 bases:

>100_bases
GCAGGGAATCTGGTACTGCCCAGGCGGCTAGGTCTAAATTTTGGGTGAAAATCTCGTCAATGGGTAGCAGTTCCCCGGTG
GTGGTCAGGAATCTATGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIDRKSDRQRFFKKHFLSGISLVICAVAVGVIWQEFRRINWPLVWENLNHLSGAQLGLASFFVVCSYGAIANYDLLAFRY
LQKTLDTYKIAFTGLITYAISPNVGFAFLSGSMLRYRLYRQWQVSHLEIAQVIAFTNLSLWVGLLPISGIIFTIFKFPLP
TGIQLPFFAQSLQGFGILCLGISALYVLGSCVFKKPLQWRNYQFKFPSLKLSLQQVFVFSLDWGFAALALHSLLAPPLNY
PVFFGVYVLAMVAGLVSTIPGGLGIFETVILFFLQDTQPEEVILATLIVFRGLYYLLPFAIAVAALLLFEYRQTRKPKQF

Sequences:

>Translated_320_residues
MIDRKSDRQRFFKKHFLSGISLVICAVAVGVIWQEFRRINWPLVWENLNHLSGAQLGLASFFVVCSYGAIANYDLLAFRY
LQKTLDTYKIAFTGLITYAISPNVGFAFLSGSMLRYRLYRQWQVSHLEIAQVIAFTNLSLWVGLLPISGIIFTIFKFPLP
TGIQLPFFAQSLQGFGILCLGISALYVLGSCVFKKPLQWRNYQFKFPSLKLSLQQVFVFSLDWGFAALALHSLLAPPLNY
PVFFGVYVLAMVAGLVSTIPGGLGIFETVILFFLQDTQPEEVILATLIVFRGLYYLLPFAIAVAALLLFEYRQTRKPKQF
>Mature_320_residues
MIDRKSDRQRFFKKHFLSGISLVICAVAVGVIWQEFRRINWPLVWENLNHLSGAQLGLASFFVVCSYGAIANYDLLAFRY
LQKTLDTYKIAFTGLITYAISPNVGFAFLSGSMLRYRLYRQWQVSHLEIAQVIAFTNLSLWVGLLPISGIIFTIFKFPLP
TGIQLPFFAQSLQGFGILCLGISALYVLGSCVFKKPLQWRNYQFKFPSLKLSLQQVFVFSLDWGFAALALHSLLAPPLNY
PVFFGVYVLAMVAGLVSTIPGGLGIFETVILFFLQDTQPEEVILATLIVFRGLYYLLPFAIAVAALLLFEYRQTRKPKQF

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybhN [H]

Homologues:

Organism=Escherichia coli, GI1787006, Length=265, Percent_Identity=28.6792452830189, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 36249; Mature: 36249

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRKSDRQRFFKKHFLSGISLVICAVAVGVIWQEFRRINWPLVWENLNHLSGAQLGLAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHH
FFVVCSYGAIANYDLLAFRYLQKTLDTYKIAFTGLITYAISPNVGFAFLSGSMLRYRLYR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH
QWQVSHLEIAQVIAFTNLSLWVGLLPISGIIFTIFKFPLPTGIQLPFFAQSLQGFGILCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHH
GISALYVLGSCVFKKPLQWRNYQFKFPSLKLSLQQVFVFSLDWGFAALALHSLLAPPLNY
HHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
PVFFGVYVLAMVAGLVSTIPGGLGIFETVILFFLQDTQPEEVILATLIVFRGLYYLLPFA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IAVAALLLFEYRQTRKPKQF
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIDRKSDRQRFFKKHFLSGISLVICAVAVGVIWQEFRRINWPLVWENLNHLSGAQLGLAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHH
FFVVCSYGAIANYDLLAFRYLQKTLDTYKIAFTGLITYAISPNVGFAFLSGSMLRYRLYR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH
QWQVSHLEIAQVIAFTNLSLWVGLLPISGIIFTIFKFPLPTGIQLPFFAQSLQGFGILCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHH
GISALYVLGSCVFKKPLQWRNYQFKFPSLKLSLQQVFVFSLDWGFAALALHSLLAPPLNY
HHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
PVFFGVYVLAMVAGLVSTIPGGLGIFETVILFFLQDTQPEEVILATLIVFRGLYYLLPFA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
IAVAALLLFEYRQTRKPKQF
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]