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The map label for this gene is 170078013

Identifier: 170078013

GI number: 170078013

Start: 1470997

End: 1471554

Strand: Direct

Name: 170078013

Synonym: SYNPCC7002_A1404

Alternate gene names: NA

Gene position: 1470997-1471554 (Clockwise)

Preceding gene: 170078012

Following gene: 170078016

Centisome position: 48.9

GC content: 49.1

Gene sequence:

>558_bases
ATGAGACACCAGCGTTGGTCACGTTTTGTGGTTCCCATCTTGTTTTATTTCGGTGCCCGTTTCGTCTTTCAGCAGACAGA
ACGACCAACCATTTCCTCGACAGCGAATCAGCCGGTCGCCCAACAGGAACAACCCCTCACCCCCCAACCCGTCAAAAATC
CCAATACCGAAACCATCGAACAGCAGATTCATACCCAAATCAATGCCTATCGAGTCAGTCTGGGCCTAGAACCTTTAACG
TTGGACTACCGGATTACGAATGAGTCCCGCAAATACAGTGCCAAAATGGCCTCTGGCGAAGCCAGTTTTTCCCATGATGG
TTTTGACGAACGGGCCGCTAGCCTTGAAAAACAAGCTTTAAAATATGCTAGTGTTGCCGAAAATCTCGCGCTTCTCCAAG
GCTATGATGACCTTGCCACCGTGGCCGTAGAAGGTTGGATCGACAGTCCCGGCCACCACAAAAATATTATTGGCGACTTC
GATCTCACAGGCATTGGTGTCGTTAAAAACGAAGAAGGTGTCTACTATTTCACGCAGCTTTTTCTCAAGCGCCGCTAA

Upstream 100 bases:

>100_bases
AACTCGATGGCGATCGCCAATTTCAAGAAGAACCGATCCAGATTCAGCATTTAGATTCTGAATTCTTACAATAGAGCTAA
CTTTCCCCAGAGGCTTTCCC

Downstream 100 bases:

>100_bases
TTACTGCTGACTTCTATCGATTGATCCTGGACATGGTGCGGGTTGTCGAGCAACTGTAATTCCGGCGTCCCTTGGGCAAC
GTTCAGCTCAAACCAAAACG

Product: SCP-like extracellular protein

Products: NA

Alternate protein names: SCP-Like Extracellular Protein; Allergen V5/Tpx-1 Family Protein; Allergen V5/Tpx-1 Related Protein; Allergen V5/Tpx-1 ; Domains; Allergen V5/Tpx-1-Like Protein; Copper Amine Oxidase Domain-Containing Protein

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRHQRWSRFVVPILFYFGARFVFQQTERPTISSTANQPVAQQEQPLTPQPVKNPNTETIEQQIHTQINAYRVSLGLEPLT
LDYRITNESRKYSAKMASGEASFSHDGFDERAASLEKQALKYASVAENLALLQGYDDLATVAVEGWIDSPGHHKNIIGDF
DLTGIGVVKNEEGVYYFTQLFLKRR

Sequences:

>Translated_185_residues
MRHQRWSRFVVPILFYFGARFVFQQTERPTISSTANQPVAQQEQPLTPQPVKNPNTETIEQQIHTQINAYRVSLGLEPLT
LDYRITNESRKYSAKMASGEASFSHDGFDERAASLEKQALKYASVAENLALLQGYDDLATVAVEGWIDSPGHHKNIIGDF
DLTGIGVVKNEEGVYYFTQLFLKRR
>Mature_185_residues
MRHQRWSRFVVPILFYFGARFVFQQTERPTISSTANQPVAQQEQPLTPQPVKNPNTETIEQQIHTQINAYRVSLGLEPLT
LDYRITNESRKYSAKMASGEASFSHDGFDERAASLEKQALKYASVAENLALLQGYDDLATVAVEGWIDSPGHHKNIIGDF
DLTGIGVVKNEEGVYYFTQLFLKRR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21010; Mature: 21010

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHQRWSRFVVPILFYFGARFVFQQTERPTISSTANQPVAQQEQPLTPQPVKNPNTETIE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QQIHTQINAYRVSLGLEPLTLDYRITNESRKYSAKMASGEASFSHDGFDERAASLEKQAL
HHHHHHHHEEEEEECCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
KYASVAENLALLQGYDDLATVAVEGWIDSPGHHKNIIGDFDLTGIGVVKNEEGVYYFTQL
HHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCCEECCCCCCEEEEEECCCCCHHHHHH
FLKRR
HHHCC
>Mature Secondary Structure
MRHQRWSRFVVPILFYFGARFVFQQTERPTISSTANQPVAQQEQPLTPQPVKNPNTETIE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QQIHTQINAYRVSLGLEPLTLDYRITNESRKYSAKMASGEASFSHDGFDERAASLEKQAL
HHHHHHHHEEEEEECCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
KYASVAENLALLQGYDDLATVAVEGWIDSPGHHKNIIGDFDLTGIGVVKNEEGVYYFTQL
HHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCCEECCCCCCEEEEEECCCCCHHHHHH
FLKRR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA