| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077992
Identifier: 170077992
GI number: 170077992
Start: 1439530
End: 1440330
Strand: Direct
Name: 170077992
Synonym: SYNPCC7002_A1378
Alternate gene names: NA
Gene position: 1439530-1440330 (Clockwise)
Preceding gene: 170077990
Following gene: 170077993
Centisome position: 47.86
GC content: 51.94
Gene sequence:
>801_bases ATGTTTGCTGTGGATGAACTACGGACAGCCCTGGAATTAGCAACGGATGAGGAACTGCACCACCTCACTCAACTGCTCTT TAGCCGTAAATTTAATCCCCTCGACTATTGGCAAACGCCTCAACCCAGCGCCATTCGTAGTCAAGACCGCGATCGCCAAA TTCAGCACATCGAAACCCGCTTCCGTTTTTTAGCCGCCGATGGGGTCACGGTGCTCCGTCGCCAAACCAAAACCCTCACC TACCGCCAGATCCTGTTTCAGGTAGGAGAATTCCTCGATATTCCCTGTGGGACTGCCCTGGATACCATTGAGCTTGAAGC AGAAATTTTCCTCGCCTTGACCAGCCGCGCTTGGGATAAACTCCCCCAAAAAGAACAACGCGCCTTGATTGATCGAGTGA GGCGATCGCTGGCCCAAACGGATTTACCGGAAGCTTTGCCCGTCCAACTCCAACATAACCCCCTGAGAATTTTCCTCAAA GGCAGTAGCACCTTGGTGATTAGTAGTGTGCTGAAATCATTTTTAATGAAGCAGGTTGCCCGGCAATTGGCGCTACATTT TGCGACGGGCCAAGCCCTAAAAACAACCACAACTCGTCTGGGTTCTTTGATGTTGACCCAAACTGCCCTGCGTTATGGCC TCACCCGTAGTGTGTTGGGGGCTGTTGTCCCGGCCTTGTGGAGTTGGTTTCTTGTCGATCTCGGTTGGCGGGCGATCGCC ACTAATTACGGGCGTATTATCCCGATGATTGTCACCTTGGCCCAAATTCGCCTCACTAGAGAACCCCTGGTTGTTGCTTA A
Upstream 100 bases:
>100_bases CATTTGATCACATTTCCTGACGTTCTCTGTCCGCGCCCCATTGTAAAAAGTTGACCAGCGAAAAGCTAGATTACAATAGG CAGCATCAAGCGTGGAGATG
Downstream 100 bases:
>100_bases ACCCCCTGGTTTAACTCTGTTACATTGGCCCGTTTTCACAGAAGTTTGAGCTAGGCTGGGGCAATAGATTTGGCAAAACT TCCCCATGCGTAAATTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MFAVDELRTALELATDEELHHLTQLLFSRKFNPLDYWQTPQPSAIRSQDRDRQIQHIETRFRFLAADGVTVLRRQTKTLT YRQILFQVGEFLDIPCGTALDTIELEAEIFLALTSRAWDKLPQKEQRALIDRVRRSLAQTDLPEALPVQLQHNPLRIFLK GSSTLVISSVLKSFLMKQVARQLALHFATGQALKTTTTRLGSLMLTQTALRYGLTRSVLGAVVPALWSWFLVDLGWRAIA TNYGRIIPMIVTLAQIRLTREPLVVA
Sequences:
>Translated_266_residues MFAVDELRTALELATDEELHHLTQLLFSRKFNPLDYWQTPQPSAIRSQDRDRQIQHIETRFRFLAADGVTVLRRQTKTLT YRQILFQVGEFLDIPCGTALDTIELEAEIFLALTSRAWDKLPQKEQRALIDRVRRSLAQTDLPEALPVQLQHNPLRIFLK GSSTLVISSVLKSFLMKQVARQLALHFATGQALKTTTTRLGSLMLTQTALRYGLTRSVLGAVVPALWSWFLVDLGWRAIA TNYGRIIPMIVTLAQIRLTREPLVVA >Mature_266_residues MFAVDELRTALELATDEELHHLTQLLFSRKFNPLDYWQTPQPSAIRSQDRDRQIQHIETRFRFLAADGVTVLRRQTKTLT YRQILFQVGEFLDIPCGTALDTIELEAEIFLALTSRAWDKLPQKEQRALIDRVRRSLAQTDLPEALPVQLQHNPLRIFLK GSSTLVISSVLKSFLMKQVARQLALHFATGQALKTTTTRLGSLMLTQTALRYGLTRSVLGAVVPALWSWFLVDLGWRAIA TNYGRIIPMIVTLAQIRLTREPLVVA
Specific function: Unknown
COG id: COG4735
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30317; Mature: 30317
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAVDELRTALELATDEELHHLTQLLFSRKFNPLDYWQTPQPSAIRSQDRDRQIQHIETR CCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH FRFLAADGVTVLRRQTKTLTYRQILFQVGEFLDIPCGTALDTIELEAEIFLALTSRAWDK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LPQKEQRALIDRVRRSLAQTDLPEALPVQLQHNPLRIFLKGSSTLVISSVLKSFLMKQVA CCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH RQLALHFATGQALKTTTTRLGSLMLTQTALRYGLTRSVLGAVVPALWSWFLVDLGWRAIA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNYGRIIPMIVTLAQIRLTREPLVVA HCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFAVDELRTALELATDEELHHLTQLLFSRKFNPLDYWQTPQPSAIRSQDRDRQIQHIETR CCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH FRFLAADGVTVLRRQTKTLTYRQILFQVGEFLDIPCGTALDTIELEAEIFLALTSRAWDK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LPQKEQRALIDRVRRSLAQTDLPEALPVQLQHNPLRIFLKGSSTLVISSVLKSFLMKQVA CCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH RQLALHFATGQALKTTTTRLGSLMLTQTALRYGLTRSVLGAVVPALWSWFLVDLGWRAIA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNYGRIIPMIVTLAQIRLTREPLVVA HCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA