| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077993
Identifier: 170077993
GI number: 170077993
Start: 1440416
End: 1442191
Strand: Direct
Name: 170077993
Synonym: SYNPCC7002_A1379
Alternate gene names: NA
Gene position: 1440416-1442191 (Clockwise)
Preceding gene: 170077992
Following gene: 170077995
Centisome position: 47.89
GC content: 51.35
Gene sequence:
>1776_bases ATGCGTAAATTTTTAATTTTGCTGCTGTTCTGTATTGGTCTTGGGTTTGGCCTTTGGCGATCGCCGAGCTTGGCGACCCA AGGGGAATACGATTCTTTAATCTTGGATTTTCGCGAAACCGTGGAAACCAGTGTCGTTGAGGCACAGTTAAAGGCGATCG CCCAACAATTCAACGTCATCCCCCGGCTCAATAGTGAATTTTCCGCTGCTGACCAGATCTACGTCATCGAGGGCAAGCGA GAAATGCTCCAGTGGTTGCGCCAATCTGACCCCATTAAAAAAGCAACGGAATACATCGAGCCCAACTACATTTACCGGGC CTATGGGGTGCCAAACGACCCAGATTACCCAAAGCAATGGAATTTACGCAGCATTAATGTCGAAGCTGCCTGGTCAGAAA CCCGAGGGGAAGGGATCACCGTGGCGGTTATCGATACTGGGGTTAGCCCTGTGCCAGATTTAGAACAAACCGCCTTTGTT GGGGGCTACGATTTCGTAGGCGATCGCCCAGAAGCTTTAGATGATGTGGGCCATGGCACCCACGTTGCTGGCACTATCGC CCAGTCGACGAACAATAACTACGGTGTTGCTGGCATTGCCTATAAAGCAAAGATTATGCCCATTAAAGTCCTCGCCGCTA ATGGTGGTGGCACCGTTGCTGATATCGCCGAGGGAATTCGTTTTGCCACCGATCAAGGGGCCGATGTGATTAACCTCAGC CTTGGGGGAGCTGGTGCCAGTCAACTGATGCAAGAAGCAATTGACTATGCCTACCGCAAAGATGTGGTGATTGTCGCTGC CGCTGGTAATGCCAACAAAAATGCTGCTGCCTATCCGGCCCGTTACCCTAAAGTGATCGGCGTTGCGGCCACCGATGCGG CTGGCAAAAAAGCGCCCTATTCCAATTACGGGGCGGGGATTGACCTTGCGGCCCCTGGGGGCAGTGAAACGGGAGGCATT CTCCAGGAAACCCTAAACCCTAAAACAGGCAAACCAGAATTTATCGACTACAAAGGCACCAGTATGGCTGCGCCCCATGT GGCTGGTGTGGCGGCCATGGTGAAAGCGAGTGGTGTGACTAAACCAGCCGAAGTTTTACAGGTTTTAACCCAATCAGCCC AAAAGGTTACTGAGGATCCTCTGAATCACTACGGTGCGGGGTATCTCAATGCGGGTCAGGCGGTGACAGAAGCTCTCAAA GGCAAAATCACCGTCAAAGATTTCTTCCGTTGGCTCCGGGACAATGGGTATTTAAATCCTCGTTTTTGGATTGATGGGGG AACAGTAGCCCTTCTGCCAAAGTTAGCGATGGTTTTGGGTTCCTATCTTCTCGCTTTTCTGCTGCGGAACTATTTGCCCT TTGGTTGGGGATGGCCCCTAAGTAGTGGCTTGGTTTTTGGCAGTTCGGGGCTATTTTTCCTCAAGGGCATTTATATTTTT GATTTGCCCCAGGCCCCTTTTCGGCTTCTGGGTAGCTCTCTCCCGGAATTGGGCAATGCCATCAACGGAAATCCTGCTTT AAATCCGCTGTTCGCTAGTGTTTTGATTCCCTTTGGGGTGTTACTCCTGTTGGCTGGTACCGAAGGGGGAAAACGCTTTG GGGTTGGTCTCTGTTTGGGGGTGGCGAGTTGCCTCTGGGTCAGTGCGATCGCCGGGCCGATGGTTTGGGGTTTGGGATCG GGTATTTTAGCCCAGGCATTTTTAGGGATTAATGGACTCCTGTGTGTGGCCCTAGCGAAATTAATGCTGACGGAACCGTT AAAAACCAGTAATTAA
Upstream 100 bases:
>100_bases CTGGTTGTTGCTTAAACCCCCTGGTTTAACTCTGTTACATTGGCCCGTTTTCACAGAAGTTTGAGCTAGGCTGGGGCAAT AGATTTGGCAAAACTTCCCC
Downstream 100 bases:
>100_bases GAAATCTGTCAAAATTTACCACTTTAAAACAGCCGCTTCTGGGCCTTCTTCCTGGCGTGTTTTGGCGTCCTTTTCAAACC ACTGGATAATTTCTTTGTGG
Product: serine proteinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MRKFLILLLFCIGLGFGLWRSPSLATQGEYDSLILDFRETVETSVVEAQLKAIAQQFNVIPRLNSEFSAADQIYVIEGKR EMLQWLRQSDPIKKATEYIEPNYIYRAYGVPNDPDYPKQWNLRSINVEAAWSETRGEGITVAVIDTGVSPVPDLEQTAFV GGYDFVGDRPEALDDVGHGTHVAGTIAQSTNNNYGVAGIAYKAKIMPIKVLAANGGGTVADIAEGIRFATDQGADVINLS LGGAGASQLMQEAIDYAYRKDVVIVAAAGNANKNAAAYPARYPKVIGVAATDAAGKKAPYSNYGAGIDLAAPGGSETGGI LQETLNPKTGKPEFIDYKGTSMAAPHVAGVAAMVKASGVTKPAEVLQVLTQSAQKVTEDPLNHYGAGYLNAGQAVTEALK GKITVKDFFRWLRDNGYLNPRFWIDGGTVALLPKLAMVLGSYLLAFLLRNYLPFGWGWPLSSGLVFGSSGLFFLKGIYIF DLPQAPFRLLGSSLPELGNAINGNPALNPLFASVLIPFGVLLLLAGTEGGKRFGVGLCLGVASCLWVSAIAGPMVWGLGS GILAQAFLGINGLLCVALAKLMLTEPLKTSN
Sequences:
>Translated_591_residues MRKFLILLLFCIGLGFGLWRSPSLATQGEYDSLILDFRETVETSVVEAQLKAIAQQFNVIPRLNSEFSAADQIYVIEGKR EMLQWLRQSDPIKKATEYIEPNYIYRAYGVPNDPDYPKQWNLRSINVEAAWSETRGEGITVAVIDTGVSPVPDLEQTAFV GGYDFVGDRPEALDDVGHGTHVAGTIAQSTNNNYGVAGIAYKAKIMPIKVLAANGGGTVADIAEGIRFATDQGADVINLS LGGAGASQLMQEAIDYAYRKDVVIVAAAGNANKNAAAYPARYPKVIGVAATDAAGKKAPYSNYGAGIDLAAPGGSETGGI LQETLNPKTGKPEFIDYKGTSMAAPHVAGVAAMVKASGVTKPAEVLQVLTQSAQKVTEDPLNHYGAGYLNAGQAVTEALK GKITVKDFFRWLRDNGYLNPRFWIDGGTVALLPKLAMVLGSYLLAFLLRNYLPFGWGWPLSSGLVFGSSGLFFLKGIYIF DLPQAPFRLLGSSLPELGNAINGNPALNPLFASVLIPFGVLLLLAGTEGGKRFGVGLCLGVASCLWVSAIAGPMVWGLGS GILAQAFLGINGLLCVALAKLMLTEPLKTSN >Mature_591_residues MRKFLILLLFCIGLGFGLWRSPSLATQGEYDSLILDFRETVETSVVEAQLKAIAQQFNVIPRLNSEFSAADQIYVIEGKR EMLQWLRQSDPIKKATEYIEPNYIYRAYGVPNDPDYPKQWNLRSINVEAAWSETRGEGITVAVIDTGVSPVPDLEQTAFV GGYDFVGDRPEALDDVGHGTHVAGTIAQSTNNNYGVAGIAYKAKIMPIKVLAANGGGTVADIAEGIRFATDQGADVINLS LGGAGASQLMQEAIDYAYRKDVVIVAAAGNANKNAAAYPARYPKVIGVAATDAAGKKAPYSNYGAGIDLAAPGGSETGGI LQETLNPKTGKPEFIDYKGTSMAAPHVAGVAAMVKASGVTKPAEVLQVLTQSAQKVTEDPLNHYGAGYLNAGQAVTEALK GKITVKDFFRWLRDNGYLNPRFWIDGGTVALLPKLAMVLGSYLLAFLLRNYLPFGWGWPLSSGLVFGSSGLFFLKGIYIF DLPQAPFRLLGSSLPELGNAINGNPALNPLFASVLIPFGVLLLLAGTEGGKRFGVGLCLGVASCLWVSAIAGPMVWGLGS GILAQAFLGINGLLCVALAKLMLTEPLKTSN
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI27894285, Length=373, Percent_Identity=26.5415549597855, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI20336180, Length=373, Percent_Identity=26.5415549597855, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI4505577, Length=373, Percent_Identity=26.5415549597855, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI20336188, Length=373, Percent_Identity=26.5415549597855, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI20336190, Length=373, Percent_Identity=26.5415549597855, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI20336184, Length=373, Percent_Identity=26.5415549597855, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI20336182, Length=373, Percent_Identity=26.5415549597855, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI20336186, Length=335, Percent_Identity=26.2686567164179, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI4505579, Length=161, Percent_Identity=32.2981366459627, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI31317307, Length=240, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320775, Length=336, Percent_Identity=31.8452380952381, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6324576, Length=299, Percent_Identity=29.4314381270903, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319893, Length=280, Percent_Identity=31.0714285714286, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI45550681, Length=295, Percent_Identity=26.1016949152542, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 62794; Mature: 62794
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFLILLLFCIGLGFGLWRSPSLATQGEYDSLILDFRETVETSVVEAQLKAIAQQFNVI CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRLNSEFSAADQIYVIEGKREMLQWLRQSDPIKKATEYIEPNYIYRAYGVPNDPDYPKQW CCCCCCCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCC NLRSINVEAAWSETRGEGITVAVIDTGVSPVPDLEQTAFVGGYDFVGDRPEALDDVGHGT CEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHEEECCCCCCCCCCHHHHHCCCCC HVAGTIAQSTNNNYGVAGIAYKAKIMPIKVLAANGGGTVADIAEGIRFATDQGADVINLS CCEEEEECCCCCCCCEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHEECCCCCCCEEEEE LGGAGASQLMQEAIDYAYRKDVVIVAAAGNANKNAAAYPARYPKVIGVAATDAAGKKAPY ECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC SNYGAGIDLAAPGGSETGGILQETLNPKTGKPEFIDYKGTSMAAPHVAGVAAMVKASGVT CCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCC KPAEVLQVLTQSAQKVTEDPLNHYGAGYLNAGQAVTEALKGKITVKDFFRWLRDNGYLNP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHCCCCCC RFWIDGGTVALLPKLAMVLGSYLLAFLLRNYLPFGWGWPLSSGLVFGSSGLFFLKGIYIF EEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCEEEE DLPQAPFRLLGSSLPELGNAINGNPALNPLFASVLIPFGVLLLLAGTEGGKRFGVGLCLG ECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VASCLWVSAIAGPMVWGLGSGILAQAFLGINGLLCVALAKLMLTEPLKTSN HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRKFLILLLFCIGLGFGLWRSPSLATQGEYDSLILDFRETVETSVVEAQLKAIAQQFNVI CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRLNSEFSAADQIYVIEGKREMLQWLRQSDPIKKATEYIEPNYIYRAYGVPNDPDYPKQW CCCCCCCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCC NLRSINVEAAWSETRGEGITVAVIDTGVSPVPDLEQTAFVGGYDFVGDRPEALDDVGHGT CEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHEEECCCCCCCCCCHHHHHCCCCC HVAGTIAQSTNNNYGVAGIAYKAKIMPIKVLAANGGGTVADIAEGIRFATDQGADVINLS CCEEEEECCCCCCCCEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHEECCCCCCCEEEEE LGGAGASQLMQEAIDYAYRKDVVIVAAAGNANKNAAAYPARYPKVIGVAATDAAGKKAPY ECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC SNYGAGIDLAAPGGSETGGILQETLNPKTGKPEFIDYKGTSMAAPHVAGVAAMVKASGVT CCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCC KPAEVLQVLTQSAQKVTEDPLNHYGAGYLNAGQAVTEALKGKITVKDFFRWLRDNGYLNP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHCCCCCC RFWIDGGTVALLPKLAMVLGSYLLAFLLRNYLPFGWGWPLSSGLVFGSSGLFFLKGIYIF EEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCEEEE DLPQAPFRLLGSSLPELGNAINGNPALNPLFASVLIPFGVLLLLAGTEGGKRFGVGLCLG ECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VASCLWVSAIAGPMVWGLGSGILAQAFLGINGLLCVALAKLMLTEPLKTSN HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]