Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077980

Identifier: 170077980

GI number: 170077980

Start: 1426886

End: 1427563

Strand: Reverse

Name: 170077980

Synonym: SYNPCC7002_A1366

Alternate gene names: NA

Gene position: 1427563-1426886 (Counterclockwise)

Preceding gene: 170077981

Following gene: 170077979

Centisome position: 47.46

GC content: 52.65

Gene sequence:

>678_bases
ATGGAAATTAAACTCTTACATCAACCAGATAATGCGATCGCCCATGTCACCCTCGACGCTGGGGAAGAAATCATTGCCCA
AGCCGGCGCCATGGTTGCCATGAGCGGCAATATCAATGCCAGCACGACCCTCCGCAAAGGCAAAGGGGGCGGCATCATGG
GAGGGCTAAAACGGATGCTTGCCGGAGAATCCCTCTTTCTGAGCGTTTTTCGAGCACCCTTACCCAATAGTGAAATTTGG
TTTGCCCCCAAGCTGATGGGGGATCTCCTCCTGTACGAAATGCGGGGCGATGAATTTGTTGTCCAAGCCTCTTCCTACCT
TGCCTCTGGCCCCAATGTGGACATTGATCTCGGTTGGCAAGGCTTTAAATCCTTCTTTTCAGGGGAATCTATCTTTTGGC
TCAGCATCAGTGGCCAAGGGCCTTTGCTGGTGACGTCCTTTGGGGCCATTTACGAAGTGGATGTGGATGGCGAATACGTC
GTGGATACGGGCCACATCGTTGCCTTTGAAAAGAGCCTGAGCTTCACCGTGGGTAAAGCAAATCCCTCTTGGATTGGGGC
ATTCCTCGGTGGAGAAGGGTTAGTCTGTCGCTTCCGAGGCAAGGGCAAACTGTACTGCCAAACCCATAATCCCGGAGCCT
TTGGTTCCCTGGTTGGTTCCCAATTACCACCCCGTTAA

Upstream 100 bases:

>100_bases
GGTGAATAAACTCAAAGGCCGTGGCCGAATCTACCTCCAATCGCGGAGTGTGTCAGGTCTTGTGGGCTTTTTACGTCCAA
AATGTCGTTAGGGGGTAGCT

Downstream 100 bases:

>100_bases
GTTGTCCTTTGAAGCCAGTGCTGAAAGTGCTTAAAAATTATGTCTCAGTTTGAATTTCGCGTTGAAAATAATCCCTCCTA
TGCCTCGCTCATTGTGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRMLAGESLFLSVFRAPLPNSEIW
FAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQGFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYV
VDTGHIVAFEKSLSFTVGKANPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR

Sequences:

>Translated_225_residues
MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRMLAGESLFLSVFRAPLPNSEIW
FAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQGFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYV
VDTGHIVAFEKSLSFTVGKANPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR
>Mature_225_residues
MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRMLAGESLFLSVFRAPLPNSEIW
FAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQGFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYV
VDTGHIVAFEKSLSFTVGKANPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 24024; Mature: 24024

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRML
CEEEEEECCCCEEEEEEECCCHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHH
AGESLFLSVFRAPLPNSEIWFAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQ
CCCHHEEHHHHCCCCCCCEEECHHHHCCEEEEEECCCEEEEEECHHHCCCCCEEEEECHH
GFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYVVDTGHIVAFEKSLSFTVGKA
HHHHHHCCCEEEEEEECCCCCEEEEECCEEEEEECCCCEEEECCEEEEEECCCEEEEECC
NPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR
CCCEEEEEECCCEEEEEEECCCEEEEEECCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRML
CEEEEEECCCCEEEEEEECCCHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHH
AGESLFLSVFRAPLPNSEIWFAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQ
CCCHHEEHHHHCCCCCCCEEECHHHHCCEEEEEECCCEEEEEECHHHCCCCCEEEEECHH
GFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYVVDTGHIVAFEKSLSFTVGKA
HHHHHHCCCEEEEEEECCCCCEEEEECCEEEEEECCCCEEEECCEEEEEECCCEEEEECC
NPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR
CCCEEEEEECCCEEEEEEECCCEEEEEECCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA