| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077980
Identifier: 170077980
GI number: 170077980
Start: 1426886
End: 1427563
Strand: Reverse
Name: 170077980
Synonym: SYNPCC7002_A1366
Alternate gene names: NA
Gene position: 1427563-1426886 (Counterclockwise)
Preceding gene: 170077981
Following gene: 170077979
Centisome position: 47.46
GC content: 52.65
Gene sequence:
>678_bases ATGGAAATTAAACTCTTACATCAACCAGATAATGCGATCGCCCATGTCACCCTCGACGCTGGGGAAGAAATCATTGCCCA AGCCGGCGCCATGGTTGCCATGAGCGGCAATATCAATGCCAGCACGACCCTCCGCAAAGGCAAAGGGGGCGGCATCATGG GAGGGCTAAAACGGATGCTTGCCGGAGAATCCCTCTTTCTGAGCGTTTTTCGAGCACCCTTACCCAATAGTGAAATTTGG TTTGCCCCCAAGCTGATGGGGGATCTCCTCCTGTACGAAATGCGGGGCGATGAATTTGTTGTCCAAGCCTCTTCCTACCT TGCCTCTGGCCCCAATGTGGACATTGATCTCGGTTGGCAAGGCTTTAAATCCTTCTTTTCAGGGGAATCTATCTTTTGGC TCAGCATCAGTGGCCAAGGGCCTTTGCTGGTGACGTCCTTTGGGGCCATTTACGAAGTGGATGTGGATGGCGAATACGTC GTGGATACGGGCCACATCGTTGCCTTTGAAAAGAGCCTGAGCTTCACCGTGGGTAAAGCAAATCCCTCTTGGATTGGGGC ATTCCTCGGTGGAGAAGGGTTAGTCTGTCGCTTCCGAGGCAAGGGCAAACTGTACTGCCAAACCCATAATCCCGGAGCCT TTGGTTCCCTGGTTGGTTCCCAATTACCACCCCGTTAA
Upstream 100 bases:
>100_bases GGTGAATAAACTCAAAGGCCGTGGCCGAATCTACCTCCAATCGCGGAGTGTGTCAGGTCTTGTGGGCTTTTTACGTCCAA AATGTCGTTAGGGGGTAGCT
Downstream 100 bases:
>100_bases GTTGTCCTTTGAAGCCAGTGCTGAAAGTGCTTAAAAATTATGTCTCAGTTTGAATTTCGCGTTGAAAATAATCCCTCCTA TGCCTCGCTCATTGTGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRMLAGESLFLSVFRAPLPNSEIW FAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQGFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYV VDTGHIVAFEKSLSFTVGKANPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR
Sequences:
>Translated_225_residues MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRMLAGESLFLSVFRAPLPNSEIW FAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQGFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYV VDTGHIVAFEKSLSFTVGKANPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR >Mature_225_residues MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRMLAGESLFLSVFRAPLPNSEIW FAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQGFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYV VDTGHIVAFEKSLSFTVGKANPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 24024; Mature: 24024
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRML CEEEEEECCCCEEEEEEECCCHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHH AGESLFLSVFRAPLPNSEIWFAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQ CCCHHEEHHHHCCCCCCCEEECHHHHCCEEEEEECCCEEEEEECHHHCCCCCEEEEECHH GFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYVVDTGHIVAFEKSLSFTVGKA HHHHHHCCCEEEEEEECCCCCEEEEECCEEEEEECCCCEEEECCEEEEEECCCEEEEECC NPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR CCCEEEEEECCCEEEEEEECCCEEEEEECCCCCHHHHHCCCCCCC >Mature Secondary Structure MEIKLLHQPDNAIAHVTLDAGEEIIAQAGAMVAMSGNINASTTLRKGKGGGIMGGLKRML CEEEEEECCCCEEEEEEECCCHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHH AGESLFLSVFRAPLPNSEIWFAPKLMGDLLLYEMRGDEFVVQASSYLASGPNVDIDLGWQ CCCHHEEHHHHCCCCCCCEEECHHHHCCEEEEEECCCEEEEEECHHHCCCCCEEEEECHH GFKSFFSGESIFWLSISGQGPLLVTSFGAIYEVDVDGEYVVDTGHIVAFEKSLSFTVGKA HHHHHHCCCEEEEEEECCCCCEEEEECCEEEEEECCCCEEEECCEEEEEECCCEEEEECC NPSWIGAFLGGEGLVCRFRGKGKLYCQTHNPGAFGSLVGSQLPPR CCCEEEEEECCCEEEEEEECCCEEEEEECCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA