| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077981
Identifier: 170077981
GI number: 170077981
Start: 1427573
End: 1428235
Strand: Reverse
Name: 170077981
Synonym: SYNPCC7002_A1367
Alternate gene names: NA
Gene position: 1428235-1427573 (Counterclockwise)
Preceding gene: 170077984
Following gene: 170077980
Centisome position: 47.48
GC content: 51.89
Gene sequence:
>663_bases GTGAAATACGAAATCCGCTATAAACCCGCCTTTGCTTGTCTATTTGTCACCCTCGAACCCGGCGAACAGGTCACAGCCGA ATCCGGTGCAATGGTCAGCATGGATGGTGGAATCTTAATGAAAACTGAATTTTCGGGGGGATTTTTCCCGGCGATTCTCC GTCGGTTATTTGGGGGAGAATCCCTGTTTGTGAATGTTTATCGCAACACGAGTCAGCGGCCCCAGACCGTCATTTTAACC CAGTCAATGGTGGGTGATATCCACCGCATTGACCTGTCCCAGGGGCCGATCTGTTTTCAGCCCGGTGCTTACATTGCCCA TACCCCCGGCGCAAAAATGGGAATCCGTTGGGCTGGCTTTGCCAGTTGGTTTGCGGGGGAAGGTCTCTTCAAGCTGCAAT TCACAGGTAGTGGCCGGGTCTTTTACGGGTGCTACGGCGGCATCATTGAAAAACACATCAAGGGTGAATTTATCGTCGAT AACAGCCACCTCGTTGCCTACGATCCGGGCATCACCATGAATATTCGGATGTCTGGGGGCTTATTTGGTTCTCTCACCTC CGGCGAAGGCCTGGTGAATAAACTCAAAGGCCGTGGCCGAATCTACCTCCAATCGCGGAGTGTGTCAGGTCTTGTGGGCT TTTTACGTCCAAAATGTCGTTAG
Upstream 100 bases:
>100_bases CCTTAACAAACATTTCTTCACTCCCATTGCCCTGCTAAAAATAAGGGGAATTAGCTTGTATTGGGCTAGTTTATTCAAAC TCTTATCAGGTAGAGTCACG
Downstream 100 bases:
>100_bases GGGGTAGCTATGGAAATTAAACTCTTACATCAACCAGATAATGCGATCGCCCATGTCACCCTCGACGCTGGGGAAGAAAT CATTGCCCAAGCCGGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGESLFVNVYRNTSQRPQTVILT QSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGFASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVD NSHLVAYDPGITMNIRMSGGLFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR
Sequences:
>Translated_220_residues MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGESLFVNVYRNTSQRPQTVILT QSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGFASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVD NSHLVAYDPGITMNIRMSGGLFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR >Mature_220_residues MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGESLFVNVYRNTSQRPQTVILT QSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGFASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVD NSHLVAYDPGITMNIRMSGGLFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 24085; Mature: 24085
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGE CCEEEEECCEEEEEEEEECCCCEEECCCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCC SLFVNVYRNTSQRPQTVILTQSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGF EEEEEEEECCCCCCCEEEEEHHHHCCEEEEECCCCCEEECCCCEEEECCCCCCCEEEECH ASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVDNSHLVAYDPGITMNIRMSGG HHHHCCCCEEEEEEECCCEEEEEEHHHHHHHHCCCCEEEECCEEEEECCCEEEEEEECCC LFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR EEEEECCCCHHHHHHCCCCEEEEEECCCCHHHHCCCCCCC >Mature Secondary Structure MKYEIRYKPAFACLFVTLEPGEQVTAESGAMVSMDGGILMKTEFSGGFFPAILRRLFGGE CCEEEEECCEEEEEEEEECCCCEEECCCCCEEEECCCEEEEEECCCCHHHHHHHHHHCCC SLFVNVYRNTSQRPQTVILTQSMVGDIHRIDLSQGPICFQPGAYIAHTPGAKMGIRWAGF EEEEEEEECCCCCCCEEEEEHHHHCCEEEEECCCCCEEECCCCEEEECCCCCCCEEEECH ASWFAGEGLFKLQFTGSGRVFYGCYGGIIEKHIKGEFIVDNSHLVAYDPGITMNIRMSGG HHHHCCCCEEEEEEECCCEEEEEEHHHHHHHHCCCCEEEECCEEEEECCCEEEEEEECCC LFGSLTSGEGLVNKLKGRGRIYLQSRSVSGLVGFLRPKCR EEEEECCCCHHHHHHCCCCEEEEEECCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA