| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is pstS [H]
Identifier: 170077978
GI number: 170077978
Start: 1425120
End: 1426049
Strand: Reverse
Name: pstS [H]
Synonym: SYNPCC7002_A1364
Alternate gene names: 170077978
Gene position: 1426049-1425120 (Counterclockwise)
Preceding gene: 170077979
Following gene: 170077977
Centisome position: 47.41
GC content: 52.15
Gene sequence:
>930_bases ATGGCCCAAAAAAATGATACGTTGCCTCTAATGATGGCCCTCGTCGTTACCCTAGGCATTCTGGGGGGCGGTGGTTGGTG GTTTTTAAATCGTTCTGGCTTCCAGGGTTTGGCCCCAAATGGTGCAGAAACGGGAAATAATGATGGGGCGATCGCCCCAG GTTCCCAAGCTACAGATAATCCTTTCAGTCCACCGGCAACAGTGGCCCCAGGAACGGTGGTAAAAATTTCTGGCTCTACC AGTATGGTGCAGATTAACACCGCCCTAAAAAATCGGTTCGAGTTGCAATATCCCCAGACTCGTGTTGAAACAACTGCTAA TGGGTCGAGTAAGGGGCTTGAAGATCTGCTGGCGGGAAATATTGACCTCGCGGCGATCTCCCGCCCCCTCCAGCCGGAAG AAATGCAACAGGGCCTCAAGGCGATCGCCGTTACCACCGATGCCGTCGCCATTGTAGTCGCCAAGGAAAATCCCTTTAGT ACTGGGCTGACTGGGGAACAGGTACAGGGCATTTTCCAAGGGAATCTCACCGATTGGTCAGCGATTACCGATAAAGCGAC AGGAACAATTCGGGTTATTAATCGCCCTCCAGTGAGTGGCACTTACCAAACTTTCCAAGAAACGGTACTCAACGGCTCAA ACTTTGGGAATGGCCCTAATTTTATGAATATGGAACAGGATGCCACCACGCCGATTTTGCAGGCCCTGGGTGCAGATGGG ATCAGTTATGCCACTTACAGCCAGATCGCCAATCAGCAAACTGTCAGAACAGTGCCCATCGATGGGGTCACCCCAGAATC AGACCTTTATCCCTACACCCGCACCCTTTATTACGCCTACCAAGAACCCGCTTCCCCCCAGGTTGAGGCTTTCCTTGGTT TTGTTGGGACTCCTGTGGGAGCAGAGTTGATCCAAGCGGCGCAGCAGTAA
Upstream 100 bases:
>100_bases AACTGCGTTTCTAGGAAAATTGATTAGCTGCTGTGCGGTGCGCCTTCGGGGTGATTACGGTATCCTGAAGGCAAATTCCA TGCACGCAACAAGAGCAACC
Downstream 100 bases:
>100_bases TGTTTCAAACCACCCGTAATCGTCTGGCCCTCTGGTACACGGCGATCACCGCAGTGTTGCTTTTGGTTTTCGCGACGGGG GTTTATTTTTACGTGCGCTA
Product: phosphate ABC transporter substrate-binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MAQKNDTLPLMMALVVTLGILGGGGWWFLNRSGFQGLAPNGAETGNNDGAIAPGSQATDNPFSPPATVAPGTVVKISGST SMVQINTALKNRFELQYPQTRVETTANGSSKGLEDLLAGNIDLAAISRPLQPEEMQQGLKAIAVTTDAVAIVVAKENPFS TGLTGEQVQGIFQGNLTDWSAITDKATGTIRVINRPPVSGTYQTFQETVLNGSNFGNGPNFMNMEQDATTPILQALGADG ISYATYSQIANQQTVRTVPIDGVTPESDLYPYTRTLYYAYQEPASPQVEAFLGFVGTPVGAELIQAAQQ
Sequences:
>Translated_309_residues MAQKNDTLPLMMALVVTLGILGGGGWWFLNRSGFQGLAPNGAETGNNDGAIAPGSQATDNPFSPPATVAPGTVVKISGST SMVQINTALKNRFELQYPQTRVETTANGSSKGLEDLLAGNIDLAAISRPLQPEEMQQGLKAIAVTTDAVAIVVAKENPFS TGLTGEQVQGIFQGNLTDWSAITDKATGTIRVINRPPVSGTYQTFQETVLNGSNFGNGPNFMNMEQDATTPILQALGADG ISYATYSQIANQQTVRTVPIDGVTPESDLYPYTRTLYYAYQEPASPQVEAFLGFVGTPVGAELIQAAQQ >Mature_308_residues AQKNDTLPLMMALVVTLGILGGGGWWFLNRSGFQGLAPNGAETGNNDGAIAPGSQATDNPFSPPATVAPGTVVKISGSTS MVQINTALKNRFELQYPQTRVETTANGSSKGLEDLLAGNIDLAAISRPLQPEEMQQGLKAIAVTTDAVAIVVAKENPFST GLTGEQVQGIFQGNLTDWSAITDKATGTIRVINRPPVSGTYQTFQETVLNGSNFGNGPNFMNMEQDATTPILQALGADGI SYATYSQIANQQTVRTVPIDGVTPESDLYPYTRTLYYAYQEPASPQVEAFLGFVGTPVGAELIQAAQQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32637; Mature: 32506
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKNDTLPLMMALVVTLGILGGGGWWFLNRSGFQGLAPNGAETGNNDGAIAPGSQATDN CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PFSPPATVAPGTVVKISGSTSMVQINTALKNRFELQYPQTRVETTANGSSKGLEDLLAGN CCCCCCCCCCCEEEEECCCCEEEEEEHHHHCCEEECCCHHHEEECCCCCCCCHHHHHHCC IDLAAISRPLQPEEMQQGLKAIAVTTDAVAIVVAKENPFSTGLTGEQVQGIFQGNLTDWS CCHHHHCCCCCHHHHHHHHHEEEEEECEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHH AITDKATGTIRVINRPPVSGTYQTFQETVLNGSNFGNGPNFMNMEQDATTPILQALGADG HHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ISYATYSQIANQQTVRTVPIDGVTPESDLYPYTRTLYYAYQEPASPQVEAFLGFVGTPVG CCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHH AELIQAAQQ HHHHHHHCC >Mature Secondary Structure AQKNDTLPLMMALVVTLGILGGGGWWFLNRSGFQGLAPNGAETGNNDGAIAPGSQATDN CCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PFSPPATVAPGTVVKISGSTSMVQINTALKNRFELQYPQTRVETTANGSSKGLEDLLAGN CCCCCCCCCCCEEEEECCCCEEEEEEHHHHCCEEECCCHHHEEECCCCCCCCHHHHHHCC IDLAAISRPLQPEEMQQGLKAIAVTTDAVAIVVAKENPFSTGLTGEQVQGIFQGNLTDWS CCHHHHCCCCCHHHHHHHHHEEEEEECEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHH AITDKATGTIRVINRPPVSGTYQTFQETVLNGSNFGNGPNFMNMEQDATTPILQALGADG HHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ISYATYSQIANQQTVRTVPIDGVTPESDLYPYTRTLYYAYQEPASPQVEAFLGFVGTPVG CCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHH AELIQAAQQ HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA