| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is resE [H]
Identifier: 170077977
GI number: 170077977
Start: 1423807
End: 1425120
Strand: Reverse
Name: resE [H]
Synonym: SYNPCC7002_A1363
Alternate gene names: 170077977
Gene position: 1425120-1423807 (Counterclockwise)
Preceding gene: 170077978
Following gene: 170077975
Centisome position: 47.38
GC content: 50.53
Gene sequence:
>1314_bases ATGTTTCAAACCACCCGTAATCGTCTGGCCCTCTGGTACACGGCGATCACCGCAGTGTTGCTTTTGGTTTTCGCGACGGG GGTTTATTTTTACGTGCGCTACACCCTGATTGAACGCATCGATGACACCCTAAAGCACGTAGTGGAAGTGGTAGAGCGAT CGCTGATCATTGAGCCAGATGATCCTGTGGGCTATCACATCAATTTAGAAGCCAGCTTTCGGCAACAGTCCCCCACCGTC GAAGATGACCGCATTGACCTCGAATTTTTCAACCCAGCCGGAGAATTGCTCTGGTCTACTTTTTCTGAACCATTAGTCTT GCCCCTAGAGTGGCACCCCCGGGGGGAAACGGTACGTCTGGGTGATGATTATCTTCTGCGACAAATCACCGATCGCCTCG AAGTGGATCGCTATGTTTTGGGGTATCTACGGGTGAGCCATCCTTGGTTTGAGGTGACGCGACCAATTCGCAAATTAGTC CTTGATCTCAGCCTGGGGATCGCGATCATGATTACCTGTGGGGCGGTGATTGGCTGGTTACTGTCTGGTATTGCCATCGA ACCGGTAAAGGATTCCTATCAACAATTGCGGCAATTTACGGCGGATGCGTCCCACGAGTTGCGTAATCCCATTGCGATGA TCCAAACCAATGTCCAAATGGCGATCACCTACCCAGATCCCGACCAACGCCAACAAAATCTCAAGGTGATTGAGCGACTC ACCCAACGGTTGGGCCGTTTAGTGAATGATCTCTTATTTCTCGCCCGCAGTGATAGTGGGGTGCTTCAGGCGGAATTTGA ACAATTACCCCTGGATGCTCTATTGCTGGAGGTTATTGAAGAACAACGGGCCATCTGCCGCCAGGAAAAAATTGAGTTGC AGTTGGATATTCAAGGGGATGCCACCGAAGAAGCCTATCTCATCTTGGGAGACTGGGATCAGATGGCGCGCCTCTTTACA AATCTGATCGGCAATGCGATCGCCTATGCTTTTCCAGGGGACTGGGGCGACAAACCCAAGCAAATTACCGTCACCATGGC CCTCAAGGAGAAAACAGGGCGGACAACCGGAGAAACCCTCCAAGTGACGGTTAAAGATAATGGCATCGGTATTCCTGCCG AAAATTCAACCAATATTTTCGACCGTTTTTATCGTCTTGATCCCGCCCGGACAAACCCTGGGGAAAGTAGCACTGGTTCA GGTCTTGGCCTCGCCATTGCGGCGGCGATCGCCAAAAACCATAAAGGCAAAATCACCGTTGAAAGCAAAGATCAAGGCAC AACATTTTCCGTTTTTTTACCACGAGCGACTTAA
Upstream 100 bases:
>100_bases ATTACGCCTACCAAGAACCCGCTTCCCCCCAGGTTGAGGCTTTCCTTGGTTTTGTTGGGACTCCTGTGGGAGCAGAGTTG ATCCAAGCGGCGCAGCAGTA
Downstream 100 bases:
>100_bases GAGCTTATTTATAAAGCCCTCCTACCCTCAGTCTGGGGGAGATTTTCGGACAATCAATTGGGATCATTGGGATCAAAGTC CTCCAAAATGAAAGTCTCTA
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MFQTTRNRLALWYTAITAVLLLVFATGVYFYVRYTLIERIDDTLKHVVEVVERSLIIEPDDPVGYHINLEASFRQQSPTV EDDRIDLEFFNPAGELLWSTFSEPLVLPLEWHPRGETVRLGDDYLLRQITDRLEVDRYVLGYLRVSHPWFEVTRPIRKLV LDLSLGIAIMITCGAVIGWLLSGIAIEPVKDSYQQLRQFTADASHELRNPIAMIQTNVQMAITYPDPDQRQQNLKVIERL TQRLGRLVNDLLFLARSDSGVLQAEFEQLPLDALLLEVIEEQRAICRQEKIELQLDIQGDATEEAYLILGDWDQMARLFT NLIGNAIAYAFPGDWGDKPKQITVTMALKEKTGRTTGETLQVTVKDNGIGIPAENSTNIFDRFYRLDPARTNPGESSTGS GLGLAIAAAIAKNHKGKITVESKDQGTTFSVFLPRAT
Sequences:
>Translated_437_residues MFQTTRNRLALWYTAITAVLLLVFATGVYFYVRYTLIERIDDTLKHVVEVVERSLIIEPDDPVGYHINLEASFRQQSPTV EDDRIDLEFFNPAGELLWSTFSEPLVLPLEWHPRGETVRLGDDYLLRQITDRLEVDRYVLGYLRVSHPWFEVTRPIRKLV LDLSLGIAIMITCGAVIGWLLSGIAIEPVKDSYQQLRQFTADASHELRNPIAMIQTNVQMAITYPDPDQRQQNLKVIERL TQRLGRLVNDLLFLARSDSGVLQAEFEQLPLDALLLEVIEEQRAICRQEKIELQLDIQGDATEEAYLILGDWDQMARLFT NLIGNAIAYAFPGDWGDKPKQITVTMALKEKTGRTTGETLQVTVKDNGIGIPAENSTNIFDRFYRLDPARTNPGESSTGS GLGLAIAAAIAKNHKGKITVESKDQGTTFSVFLPRAT >Mature_437_residues MFQTTRNRLALWYTAITAVLLLVFATGVYFYVRYTLIERIDDTLKHVVEVVERSLIIEPDDPVGYHINLEASFRQQSPTV EDDRIDLEFFNPAGELLWSTFSEPLVLPLEWHPRGETVRLGDDYLLRQITDRLEVDRYVLGYLRVSHPWFEVTRPIRKLV LDLSLGIAIMITCGAVIGWLLSGIAIEPVKDSYQQLRQFTADASHELRNPIAMIQTNVQMAITYPDPDQRQQNLKVIERL TQRLGRLVNDLLFLARSDSGVLQAEFEQLPLDALLLEVIEEQRAICRQEKIELQLDIQGDATEEAYLILGDWDQMARLFT NLIGNAIAYAFPGDWGDKPKQITVTMALKEKTGRTTGETLQVTVKDNGIGIPAENSTNIFDRFYRLDPARTNPGESSTGS GLGLAIAAAIAKNHKGKITVESKDQGTTFSVFLPRAT
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=251, Percent_Identity=32.2709163346614, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1786600, Length=240, Percent_Identity=29.1666666666667, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI1789149, Length=234, Percent_Identity=28.2051282051282, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788393, Length=251, Percent_Identity=29.0836653386454, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789403, Length=253, Percent_Identity=29.2490118577075, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788279, Length=267, Percent_Identity=27.7153558052434, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI48994928, Length=234, Percent_Identity=26.9230769230769, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788713, Length=239, Percent_Identity=25.9414225941423, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788549, Length=299, Percent_Identity=23.4113712374582, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786912, Length=253, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787894, Length=257, Percent_Identity=27.2373540856031, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787374, Length=253, Percent_Identity=25.6916996047431, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=23.6947791164659, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1790346, Length=274, Percent_Identity=27.3722627737226, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1790436, Length=247, Percent_Identity=26.7206477732794, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49378; Mature: 49378
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQTTRNRLALWYTAITAVLLLVFATGVYFYVRYTLIERIDDTLKHVVEVVERSLIIEPD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC DPVGYHINLEASFRQQSPTVEDDRIDLEFFNPAGELLWSTFSEPLVLPLEWHPRGETVRL CCCCEEEEEEEHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEEE GDDYLLRQITDRLEVDRYVLGYLRVSHPWFEVTRPIRKLVLDLSLGIAIMITCGAVIGWL CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGIAIEPVKDSYQQLRQFTADASHELRNPIAMIQTNVQMAITYPDPDQRQQNLKVIERL HHCCEECCHHHHHHHHHHHHCCHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHHHHHH TQRLGRLVNDLLFLARSDSGVLQAEFEQLPLDALLLEVIEEQRAICRQEKIELQLDIQGD HHHHHHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCC ATEEAYLILGDWDQMARLFTNLIGNAIAYAFPGDWGDKPKQITVTMALKEKTGRTTGETL CCCCEEEEEECHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCEE QVTVKDNGIGIPAENSTNIFDRFYRLDPARTNPGESSTGSGLGLAIAAAIAKNHKGKITV EEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE ESKDQGTTFSVFLPRAT ECCCCCCEEEEEECCCC >Mature Secondary Structure MFQTTRNRLALWYTAITAVLLLVFATGVYFYVRYTLIERIDDTLKHVVEVVERSLIIEPD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC DPVGYHINLEASFRQQSPTVEDDRIDLEFFNPAGELLWSTFSEPLVLPLEWHPRGETVRL CCCCEEEEEEEHHCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEEE GDDYLLRQITDRLEVDRYVLGYLRVSHPWFEVTRPIRKLVLDLSLGIAIMITCGAVIGWL CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGIAIEPVKDSYQQLRQFTADASHELRNPIAMIQTNVQMAITYPDPDQRQQNLKVIERL HHCCEECCHHHHHHHHHHHHCCHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHHHHHH TQRLGRLVNDLLFLARSDSGVLQAEFEQLPLDALLLEVIEEQRAICRQEKIELQLDIQGD HHHHHHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCC ATEEAYLILGDWDQMARLFTNLIGNAIAYAFPGDWGDKPKQITVTMALKEKTGRTTGETL CCCCEEEEEECHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCEE QVTVKDNGIGIPAENSTNIFDRFYRLDPARTNPGESSTGSGLGLAIAAAIAKNHKGKITV EEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE ESKDQGTTFSVFLPRAT ECCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]