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The map label for this gene is 170077932

Identifier: 170077932

GI number: 170077932

Start: 1373018

End: 1373725

Strand: Reverse

Name: 170077932

Synonym: SYNPCC7002_A1317

Alternate gene names: NA

Gene position: 1373725-1373018 (Counterclockwise)

Preceding gene: 170077933

Following gene: 170077925

Centisome position: 45.67

GC content: 49.44

Gene sequence:

>708_bases
ATGAAGCGTGAGCCAATTAAGCCAGAAACTTTGGGTTTAAGGCCGTTCCAACTCTGGCAAGAAAATTCTGCGCCGGATCT
GCGCATCGAAATTATTCCGCTGATCGATGTGATTTTTTGTGTGCTGACCTTTTTTATCCTGGCGGCAGTGAATTTATCGC
GACAGCAAGCGATTAACTTAAATTTACCTGTGGCGGAGAGCGCAACGACCCAAATGCCCGATATGGTGATTGTGAGTTTG
ACGGACTTCGGGCAAATCTATGTGGAAAAACAATTGATTGAGACCCAGGCCCAATTTTCACAAATTGTTGAGGATTATTT
AGGGCGTAATCCTAATGGTGTCGTTGTGCTCAATGCGTCGGAAAAGCGGCCCTATCAGGAAGTGATTCAGGTTTTAGATT
GGCTCAAATCCATTGGTGGCGAACGGGTCGCCTTGGGAACGGGCGCAGGCACCCAGGGGGAACAGGCCCTTGATTCTTTC
TTTGAGGGCCAACAAACTCCGGGCTTGAATCCAGGTACGCCGACAATTCCCCAGGTGCCGGGAGTCAATCCAAATAATGA
TTTTCAGCTTGAGCCCCTCGACAGTGGCACACCGTTACCGCCGCCCAATGGGAATGGGTTTGATTTGGAGTTACAGCCCC
TAGAGGAGTTCGGGACGCCACCTAGTCCGACCCAGATTCAGGAGCAGTTACAAAATAATCAGCAATAG

Upstream 100 bases:

>100_bases
GCGGGCAGTGAACTAGAAATGCTCTATCGCCAAAATTATCTCGAAGGATTACCTGCTTCTGTTGACAATGTAGATGCAAT
GCTCATTGAAGGAGACCAAA

Downstream 100 bases:

>100_bases
TTTGGAGAATTTGCTGGTGGATGGTTTCAGGGGGTTGGGTAGCATCGAGTTGTTGCCAATTCCCTGGATAGGTTTGAAAA
ATTTGTTGGTAGTTTTGGCG

Product: biopolymer transport ExbD like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKREPIKPETLGLRPFQLWQENSAPDLRIEIIPLIDVIFCVLTFFILAAVNLSRQQAINLNLPVAESATTQMPDMVIVSL
TDFGQIYVEKQLIETQAQFSQIVEDYLGRNPNGVVVLNASEKRPYQEVIQVLDWLKSIGGERVALGTGAGTQGEQALDSF
FEGQQTPGLNPGTPTIPQVPGVNPNNDFQLEPLDSGTPLPPPNGNGFDLELQPLEEFGTPPSPTQIQEQLQNNQQ

Sequences:

>Translated_235_residues
MKREPIKPETLGLRPFQLWQENSAPDLRIEIIPLIDVIFCVLTFFILAAVNLSRQQAINLNLPVAESATTQMPDMVIVSL
TDFGQIYVEKQLIETQAQFSQIVEDYLGRNPNGVVVLNASEKRPYQEVIQVLDWLKSIGGERVALGTGAGTQGEQALDSF
FEGQQTPGLNPGTPTIPQVPGVNPNNDFQLEPLDSGTPLPPPNGNGFDLELQPLEEFGTPPSPTQIQEQLQNNQQ
>Mature_235_residues
MKREPIKPETLGLRPFQLWQENSAPDLRIEIIPLIDVIFCVLTFFILAAVNLSRQQAINLNLPVAESATTQMPDMVIVSL
TDFGQIYVEKQLIETQAQFSQIVEDYLGRNPNGVVVLNASEKRPYQEVIQVLDWLKSIGGERVALGTGAGTQGEQALDSF
FEGQQTPGLNPGTPTIPQVPGVNPNNDFQLEPLDSGTPLPPPNGNGFDLELQPLEEFGTPPSPTQIQEQLQNNQQ

Specific function: Unknown

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 25885; Mature: 25885

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKREPIKPETLGLRPFQLWQENSAPDLRIEIIPLIDVIFCVLTFFILAAVNLSRQQAINL
CCCCCCCCHHCCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHEEEC
NLPVAESATTQMPDMVIVSLTDFGQIYVEKQLIETQAQFSQIVEDYLGRNPNGVVVLNAS
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
EKRPYQEVIQVLDWLKSIGGERVALGTGAGTQGEQALDSFFEGQQTPGLNPGTPTIPQVP
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GVNPNNDFQLEPLDSGTPLPPPNGNGFDLELQPLEEFGTPPSPTQIQEQLQNNQQ
CCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKREPIKPETLGLRPFQLWQENSAPDLRIEIIPLIDVIFCVLTFFILAAVNLSRQQAINL
CCCCCCCCHHCCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHEEEC
NLPVAESATTQMPDMVIVSLTDFGQIYVEKQLIETQAQFSQIVEDYLGRNPNGVVVLNAS
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
EKRPYQEVIQVLDWLKSIGGERVALGTGAGTQGEQALDSFFEGQQTPGLNPGTPTIPQVP
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GVNPNNDFQLEPLDSGTPLPPPNGNGFDLELQPLEEFGTPPSPTQIQEQLQNNQQ
CCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]