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The map label for this gene is dcd [H]

Identifier: 170077925

GI number: 170077925

Start: 1365247

End: 1365843

Strand: Reverse

Name: dcd [H]

Synonym: SYNPCC7002_A1310

Alternate gene names: 170077925

Gene position: 1365843-1365247 (Counterclockwise)

Preceding gene: 170077932

Following gene: 170077924

Centisome position: 45.41

GC content: 50.59

Gene sequence:

>597_bases
ATGCTGAAGAATGACATTTGGATCCTCGAACAAGCCCAACAGGGGATGATTTCTCCCTTTGAAGCCTCACTGATCCGCCA
GATCCAACTGTCCCCCCAGCAAACTGTACCGGCCCTCAGCTACGGCCTGTCTAGCTATGGCTACGATATTCGCCTCAGCC
CCGAAGAATTTCTTATTTTCCGCCATATCCCTGGCACCGTTGTGAATCCCAAAGCCTTCAGCCCGGAAAACCTTGAGCGG
GTTGACCTCAAGCGCGATGAGTACGGCGATTACTTTATTATTCCGGCTAATTCCTATGGTTTGGGCGTGTCCCTCGAAAA
AATTCAGATGCCCCCCAATGTCACCGCGATCTGTCTTGGTAAGTCCACCTATGCCCGTGTCGGTCTGATTGCGAACACAA
CTCCCCTAGAGGCTTCCTGGTGCGGTGCAATCACCCTTGAATTCAGCAACGCCTCTAGTACCGACTGCCGTATTTATGCT
AATGAAGGGGTTGTGCAACTACTTTTCTTTGAAGGCGATCCCTGCAACACAACTTATTCTGATCGTGGTGGAAAATACCA
AAATCAGGAAGGAAAAGTCACCCTGCCCAGAGTCTAG

Upstream 100 bases:

>100_bases
AATTAAAAAAATAAACTCCAAACTCCAAATTTGTGGGGTTTTTGTGGGATTATATAGTTTTTGTTTTTTGCTATGATGAG
CGATTTTAGCTACAGGAACT

Downstream 100 bases:

>100_bases
GCCGATTCTGTTTATAGTTGGCGATCGCCCCAATTTTTATTACAACCCCCATGGACATCGCTTATTTTTGTCTATGGTGA
AATCAAATCTTTTCTTTCCC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLKNDIWILEQAQQGMISPFEASLIRQIQLSPQQTVPALSYGLSSYGYDIRLSPEEFLIFRHIPGTVVNPKAFSPENLER
VDLKRDEYGDYFIIPANSYGLGVSLEKIQMPPNVTAICLGKSTYARVGLIANTTPLEASWCGAITLEFSNASSTDCRIYA
NEGVVQLLFFEGDPCNTTYSDRGGKYQNQEGKVTLPRV

Sequences:

>Translated_198_residues
MLKNDIWILEQAQQGMISPFEASLIRQIQLSPQQTVPALSYGLSSYGYDIRLSPEEFLIFRHIPGTVVNPKAFSPENLER
VDLKRDEYGDYFIIPANSYGLGVSLEKIQMPPNVTAICLGKSTYARVGLIANTTPLEASWCGAITLEFSNASSTDCRIYA
NEGVVQLLFFEGDPCNTTYSDRGGKYQNQEGKVTLPRV
>Mature_198_residues
MLKNDIWILEQAQQGMISPFEASLIRQIQLSPQQTVPALSYGLSSYGYDIRLSPEEFLIFRHIPGTVVNPKAFSPENLER
VDLKRDEYGDYFIIPANSYGLGVSLEKIQMPPNVTAICLGKSTYARVGLIANTTPLEASWCGAITLEFSNASSTDCRIYA
NEGVVQLLFFEGDPCNTTYSDRGGKYQNQEGKVTLPRV

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 22010; Mature: 22010

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNDIWILEQAQQGMISPFEASLIRQIQLSPQQTVPALSYGLSSYGYDIRLSPEEFLIF
CCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECHHHEEEE
RHIPGTVVNPKAFSPENLERVDLKRDEYGDYFIIPANSYGLGVSLEKIQMPPNVTAICLG
EECCCCEECCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEC
KSTYARVGLIANTTPLEASWCGAITLEFSNASSTDCRIYANEGVVQLLFFEGDPCNTTYS
CCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCC
DRGGKYQNQEGKVTLPRV
CCCCCCCCCCCCEECCCC
>Mature Secondary Structure
MLKNDIWILEQAQQGMISPFEASLIRQIQLSPQQTVPALSYGLSSYGYDIRLSPEEFLIF
CCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECHHHEEEE
RHIPGTVVNPKAFSPENLERVDLKRDEYGDYFIIPANSYGLGVSLEKIQMPPNVTAICLG
EECCCCEECCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEC
KSTYARVGLIANTTPLEASWCGAITLEFSNASSTDCRIYANEGVVQLLFFEGDPCNTTYS
CCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCC
DRGGKYQNQEGKVTLPRV
CCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA