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The map label for this gene is psbW2

Identifier: 170077927

GI number: 170077927

Start: 1366293

End: 1366766

Strand: Direct

Name: psbW2

Synonym: SYNPCC7002_A1312

Alternate gene names: NA

Gene position: 1366293-1366766 (Clockwise)

Preceding gene: 170077926

Following gene: 170077928

Centisome position: 45.42

GC content: 49.37

Gene sequence:

>474_bases
ATGTTTAACTTCTTCAAAAATAAACAAACCGAACCAGCCGCCCCGCCTCCACCAAAAGACCCAACACCACGGATCGAATT
TTTCAACGGCATCAGCGAAGAACTCAGCAACGTTAGCCTGCAGCGCAACCCCAAAACAGGTGTCAAATCCGTCTCTATGA
CCTTTGCCCAACTCAATGCCCTTGACCGTTTCCAGAGCTTTACTGCTGGCTCCAATGGCATTGTCCGACTGATCGACGAA
GAAGGAGACATCGCAGTTACCCCCTCCAGTTGTCGCATTGTCTTTGGTGGCGAAGAAGGAGACGAGCTCCGGGGCGTCAT
TTGTCGCTTTGAAATTGAGAATGACGACCACTGGGAAAGATTCATGCGTTTCATGCACCGTTACGCCGATGAACATGGCT
TTGCCTATGGTGAAAGTGCTGAGACCTCCAATGAACCATCCTCATTAGCATCAGAAACAGATTCAGAAGCTTAG

Upstream 100 bases:

>100_bases
CAAAATAAAGCAGGCAAAGCCGAATAGGTTCAGCACACGATTGTTAGGATAGGGGTATAGCCTTATATCCCTCCCTCACT
GGCGATCGCCCTCCAAAATC

Downstream 100 bases:

>100_bases
GATGCAGGATTAAGCCCCTTGTCATCCCAAAAGCGCATCGATCCCCATAAAGAGTATCAGCGGTTACGAATTTAGCGAAG
AAAGAATGTGATTCTTTATC

Product: photosystem II complex subunit

Products: NA

Alternate protein names: Photosystem II; Photosystem II Protein; Photosystem II Complex Subunit; Photosystem II Reaction Center W Protein

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MFNFFKNKQTEPAAPPPPKDPTPRIEFFNGISEELSNVSLQRNPKTGVKSVSMTFAQLNALDRFQSFTAGSNGIVRLIDE
EGDIAVTPSSCRIVFGGEEGDELRGVICRFEIENDDHWERFMRFMHRYADEHGFAYGESAETSNEPSSLASETDSEA

Sequences:

>Translated_157_residues
MFNFFKNKQTEPAAPPPPKDPTPRIEFFNGISEELSNVSLQRNPKTGVKSVSMTFAQLNALDRFQSFTAGSNGIVRLIDE
EGDIAVTPSSCRIVFGGEEGDELRGVICRFEIENDDHWERFMRFMHRYADEHGFAYGESAETSNEPSSLASETDSEA
>Mature_157_residues
MFNFFKNKQTEPAAPPPPKDPTPRIEFFNGISEELSNVSLQRNPKTGVKSVSMTFAQLNALDRFQSFTAGSNGIVRLIDE
EGDIAVTPSSCRIVFGGEEGDELRGVICRFEIENDDHWERFMRFMHRYADEHGFAYGESAETSNEPSSLASETDSEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17575; Mature: 17575

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFFKNKQTEPAAPPPPKDPTPRIEFFNGISEELSNVSLQRNPKTGVKSVSMTFAQLNA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
LDRFQSFTAGSNGIVRLIDEEGDIAVTPSSCRIVFGGEEGDELRGVICRFEIENDDHWER
HHHHHHHCCCCCCEEEEEECCCCEEECCCCCEEEECCCCCCCCEEEEEEEEECCCHHHHH
FMRFMHRYADEHGFAYGESAETSNEPSSLASETDSEA
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MFNFFKNKQTEPAAPPPPKDPTPRIEFFNGISEELSNVSLQRNPKTGVKSVSMTFAQLNA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
LDRFQSFTAGSNGIVRLIDEEGDIAVTPSSCRIVFGGEEGDELRGVICRFEIENDDHWER
HHHHHHHCCCCCCEEEEEECCCCEEECCCCCEEEECCCCCCCCEEEEEEEEECCCHHHHH
FMRFMHRYADEHGFAYGESAETSNEPSSLASETDSEA
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA