Click here to switch to the map view.

The map label for this gene is petM

Identifier: 170077926

GI number: 170077926

Start: 1366100

End: 1366219

Strand: Direct

Name: petM

Synonym: SYNPCC7002_A1311

Alternate gene names: NA

Gene position: 1366100-1366219 (Clockwise)

Preceding gene: 170077922

Following gene: 170077927

Centisome position: 45.41

GC content: 42.5

Gene sequence:

>120_bases
ATGAGCGCAGAAAGTATGATGTTCAACGGCTTTATCATTGCCATCACCGCAGTTCTCTTTGGTGTAGCTTGGGGATTTTT
GATCCTCAAAATCCAAAATAAAGCAGGCAAAGCCGAATAG

Upstream 100 bases:

>100_bases
ATACCCCAACCGCAAAAATCCCACTACCTGCTTTAAAATGTCCTTTGTGGCCAAACCGCTTTAAAATCAAGCCATTATAA
CCAGACAAAGGAGTATTTCC

Downstream 100 bases:

>100_bases
GTTCAGCACACGATTGTTAGGATAGGGGTATAGCCTTATATCCCTCCCTCACTGGCGATCGCCCTCCAAAATCATGTTTA
ACTTCTTCAAAAATAAACAA

Product: cytochrome b6-f complex subunit VII

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 39; Mature: 38

Protein sequence:

>39_residues
MSAESMMFNGFIIAITAVLFGVAWGFLILKIQNKAGKAE

Sequences:

>Translated_39_residues
MSAESMMFNGFIIAITAVLFGVAWGFLILKIQNKAGKAE
>Mature_38_residues
SAESMMFNGFIIAITAVLFGVAWGFLILKIQNKAGKAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4219; Mature: 4088

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAESMMFNGFIIAITAVLFGVAWGFLILKIQNKAGKAE
CCCCHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCC
>Mature Secondary Structure 
SAESMMFNGFIIAITAVLFGVAWGFLILKIQNKAGKAE
CCCHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA