| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077918
Identifier: 170077918
GI number: 170077918
Start: 1356350
End: 1356901
Strand: Direct
Name: 170077918
Synonym: SYNPCC7002_A1303
Alternate gene names: NA
Gene position: 1356350-1356901 (Clockwise)
Preceding gene: 170077917
Following gene: 170077919
Centisome position: 45.09
GC content: 50.72
Gene sequence:
>552_bases ATGCGCCAAAATCGATGGAAAAAGGCGATCGCCAGTTTGTTGATCGTGATCAGTTGTACGTTGGCTGCTTGCGGTGGCGT CGGTAGCCTCCAGGGCTATAGCAATGGCACCTATGGCTATCAGTTTCTCTATCCCAATGGTTGGATTCCCGTTGACGTCA GCAAGAGCGATACTGGCGTAGATGTGGTATTTCGGGATTTGGTGGAATATTCCGAAAATTTGAGCGTCATTATCAGTGAT GTTCCCGCCGACAAAGCCTTAAACGATCTCGGCACTCCCACCGATGTTGGCTATCGGTTTATGAAAGAAGCAAGCCAAAA TAGCGATCGCCAACCTGAATTGATCCGGGCCGAAAGCCGCACCGACAAGGGCCAAACCTACTACACCCTCGAATATCGCG TCACCCTCCCTGAAGGTCAAATGCGCCATGACCTCGCCACCGTTGCCGTCAAGCTAGGCAAACTCTATACCTTTAATCTC TCGACCCGCGAAAGCCGTTGGCCCCAAGTGGAGAAACTCTTTAACGCGATGGTCAATTCCTTTAAGGTCTAA
Upstream 100 bases:
>100_bases ATTTCGGTTTGAGCCGGTGTTTTCGCTAGGATGATGAACGCGGAGACTCCGGCTCTGTAAGTTTATTTTTTAATTTCTTT TAAATTTCTGAGGTAAATAA
Downstream 100 bases:
>100_bases TTGATCAGCCATATTCAAGCAATATTTTTGACACCTTGATCCGCCAGTGCATCCACCTGGGTATGCTGTAATTGCCTTTG TTTGCGCCGCCTTACCTCAA
Product: PsbP
Products: NA
Alternate protein names: Photosystem II Oxygen-Evolving Complex; Photosystem II PsbP Protein; Photosystem II Oxygen Evolution Complex Protein PsbP
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGVDVVFRDLVEYSENLSVIISD VPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESRTDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNL STRESRWPQVEKLFNAMVNSFKV
Sequences:
>Translated_183_residues MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGVDVVFRDLVEYSENLSVIISD VPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESRTDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNL STRESRWPQVEKLFNAMVNSFKV >Mature_183_residues MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGVDVVFRDLVEYSENLSVIISD VPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESRTDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNL STRESRWPQVEKLFNAMVNSFKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20564; Mature: 20564
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCH DVVFRDLVEYSENLSVIISDVPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESR HHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHEECCCC TDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNLSTRESRWPQVEKLFNAMVNS CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHH FKV CCC >Mature Secondary Structure MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCH DVVFRDLVEYSENLSVIISDVPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESR HHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHEECCCC TDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNLSTRESRWPQVEKLFNAMVNS CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHH FKV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA