Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077913

Identifier: 170077913

GI number: 170077913

Start: 1349890

End: 1350483

Strand: Direct

Name: 170077913

Synonym: SYNPCC7002_A1298

Alternate gene names: NA

Gene position: 1349890-1350483 (Clockwise)

Preceding gene: 170077912

Following gene: 170077915

Centisome position: 44.88

GC content: 47.47

Gene sequence:

>594_bases
ATGAAACCCTTCACACGTCAATGGGTACTGCTGGGCCTTATTCCCCTCCTGACTTTGGGGTCACTACTGCCCACATTGCC
CGCCGCCGCTGACCCCAGAAGAAACAACACCCCCGAAAATTCCTACGAATACTACAGATATCGTTGGGATTATGATGACG
ATGATGACTGGGATGATTATGACGATGACGACGATGATCGCTATCGATATCAATACCGTCGATACGACTGGCGAGATGAA
ATTTCTTCCTGGGATAGAATTTTTAATGACATTGATCGCAATTACAACAGTCGTATTCCCCGCGAGCTTTTTTATTTCCT
AAGACGCGACCAAAATCTGCGTCGGAGCCTGTTTCAAACCTTCGGTCTGCCTAGGGGAAATGACAGTTTGATCCGTGACA
TTATTCTCGGTGTTCTTTTCGATCGTAACTACAACAATTACAATAACTACCGTTATCAGCGCGGGTTTGACTACGGCATC
GATGCTAGTTGCTTACCAGCCCGGTGGCGACAGGAATATTATCGCGGCAACCCAGTGCCTCCCTATTTGTTGCGGCAATG
TGGTCGCGTGCGTTCGTATGATTACGATGATTAG

Upstream 100 bases:

>100_bases
TTTTACATCATTAATTTCACGCCCATTGGGAAACTTTTCCGTGGCTTAACCTGTCATGGACTTTTACACAAGGATTGAGT
TAAGCAGGATATTTAGCACC

Downstream 100 bases:

>100_bases
CTAAAACGATTTCCCTAGGGTTGTTTCACTGAGGGGACATCGGGTCTACGGAACAAACCGAGGCTATAAAGATAGAGCGT
CCCGACGGAACTGAGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKPFTRQWVLLGLIPLLTLGSLLPTLPAAADPRRNNTPENSYEYYRYRWDYDDDDDWDDYDDDDDDRYRYQYRRYDWRDE
ISSWDRIFNDIDRNYNSRIPRELFYFLRRDQNLRRSLFQTFGLPRGNDSLIRDIILGVLFDRNYNNYNNYRYQRGFDYGI
DASCLPARWRQEYYRGNPVPPYLLRQCGRVRSYDYDD

Sequences:

>Translated_197_residues
MKPFTRQWVLLGLIPLLTLGSLLPTLPAAADPRRNNTPENSYEYYRYRWDYDDDDDWDDYDDDDDDRYRYQYRRYDWRDE
ISSWDRIFNDIDRNYNSRIPRELFYFLRRDQNLRRSLFQTFGLPRGNDSLIRDIILGVLFDRNYNNYNNYRYQRGFDYGI
DASCLPARWRQEYYRGNPVPPYLLRQCGRVRSYDYDD
>Mature_197_residues
MKPFTRQWVLLGLIPLLTLGSLLPTLPAAADPRRNNTPENSYEYYRYRWDYDDDDDWDDYDDDDDDRYRYQYRRYDWRDE
ISSWDRIFNDIDRNYNSRIPRELFYFLRRDQNLRRSLFQTFGLPRGNDSLIRDIILGVLFDRNYNNYNNYRYQRGFDYGI
DASCLPARWRQEYYRGNPVPPYLLRQCGRVRSYDYDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24377; Mature: 24377

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFTRQWVLLGLIPLLTLGSLLPTLPAAADPRRNNTPENSYEYYRYRWDYDDDDDWDDY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
DDDDDDRYRYQYRRYDWRDEISSWDRIFNDIDRNYNSRIPRELFYFLRRDQNLRRSLFQT
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH
FGLPRGNDSLIRDIILGVLFDRNYNNYNNYRYQRGFDYGIDASCLPARWRQEYYRGNPVP
HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
PYLLRQCGRVRSYDYDD
HHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MKPFTRQWVLLGLIPLLTLGSLLPTLPAAADPRRNNTPENSYEYYRYRWDYDDDDDWDDY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
DDDDDDRYRYQYRRYDWRDEISSWDRIFNDIDRNYNSRIPRELFYFLRRDQNLRRSLFQT
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH
FGLPRGNDSLIRDIILGVLFDRNYNNYNNYRYQRGFDYGIDASCLPARWRQEYYRGNPVP
HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
PYLLRQCGRVRSYDYDD
HHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA