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The map label for this gene is 170077915

Identifier: 170077915

GI number: 170077915

Start: 1351873

End: 1353501

Strand: Direct

Name: 170077915

Synonym: SYNPCC7002_A1300

Alternate gene names: NA

Gene position: 1351873-1353501 (Clockwise)

Preceding gene: 170077913

Following gene: 170077916

Centisome position: 44.94

GC content: 50.64

Gene sequence:

>1629_bases
ATGACCAACCTTACGCTTCTTCAGCTTTGTATTTGGCTTAGTCACAAACACGGGGACCCCCTGGATGGACTGCGTCAAGA
GCTATTATTGCGGGCGTTAGAAGGGTACAAATTAAAAGATATTCAGATCGATGGCTATTCCCACAGCTATGTAAAACGGG
TTATTGCTCCGGATCTTTGGAAACGCCTCGGACGTTATTGTAACCAACGGGTGGGGATTCGTTCACTCCAGTTGGCTTTG
ACCACTAAATATGAGCAGCTCTCGGAACAAGAAAAGGCAGCGGTCGATAAAATCGTACCCAACGGTATGGCCGCAACGAC
GGAGTCCCAAGTACCAGCCCCAACACCACCCCAGTACCAAGGAATTCCGAGAAACAAGAATCATTTTTATAACCAAGAGT
CAACCCTGCGCACCCTAGGGCAACGGCTCCAACAAAGGGATATTTCATTAATCTTCGTGCTAGGGGGTGGCGGCCTGGGA
AAGACTACCCTTGTCAGCGAAGTGCTCCGGCACCACCCACCACTCCAGGAAAACACGCTCTGGTGTAACCTCAGCGATCG
CCTCATGTTTGATCACAATTGGGCTTTGATTCAGCAGGAATGGGCCTTGGCGGAACACCCTGACGGGGCGATCGCCCAAC
TCCAGGATCATTTGCAACAGCAGCCGAAGATTTTAGTCTTTGACCACTGGGAACTACTCTTTGCCACCGCTTGTCTGTCG
GGAAACTATCAACCGCAACACGTAATGTATGTGGAATTTTTAGAGGCGATCGCCCACCAGAGTCTAGCTGGCACCGTTGT
CGTGATTTCCAGAGAAAATTCCCCCGCCATCGAAGCCTTAGCCACGGACAACCCCAGGGTCACATTGATCACCGTCGAAG
GCCTCAGTAATTTAGTCGCCCAGCAAATCCTCCAGGAATATAACCTCCAAGACCCAGAGCTTTGGGCTGATTTGGTCGAG
ACCTATCGCGGCAACCCCCTCAAGCTCCGGCTAATTGCCACAGGGATTCAAGAATGGTATGGCGGTTCTGTGGCGCAATT
TCAAAACCAAGAAACAATTATCGGTGGCAATACCCTACGGGATATCCTCTACAATCTCACCTGCCGCATTAGCAACTCCG
AACAGGAAGTGCTCTACTGGCTGATGTTGTGGGGCAAATCCATTACCCTCGAACAACTGCAGGCTAACTTTCATGTAGAA
ATGCCCTTTGCCAGTGAAGTTTGGGATGCGGTGCGCTCCCTTGACCGACGTTTCCTCCTGGAGAAAAAAGAAAATCATCG
CCCCTACTTTGGCCTGCAACCGTCTATCCAGCGTTACCTCGCCCAGGAATTTACCCGGGAATGTTGCCAAGAAATTATCC
AGGCGATCGCCACTCTCCCCCAAACCCACTTTAATCACCTCAAACATTTCCCCCTCATGCCCCAGGGAGCCGATCCAAAT
ATCCTGACTTCCCCCGTTATTTGCCCGATCCTGAAGGGACTGCAAAACCGTTATCGGGATTTTTCACAAATCCAAGCAAA
TTTGCGGCGACTTGCCCAAAACACGCCCCCTGCAAACTCCCTCCAGCACGACTATCGCCAAACCAATCTCACCCTTCTAT
ATGAAACCTTAACGACCTATTTTCTCTAG

Upstream 100 bases:

>100_bases
AAGGAAAGGAATACAGATAAACTCTTAGATAGTTGCCTTAGTGTGTGGCAGAGCATTGTCCATTGCAGCCGTCACCTAAC
ATTTCATCGAATAACGCCAC

Downstream 100 bases:

>100_bases
CCCATCCGGAGATATTTAAAGGAAAAACTTTTCTGGGAATCTTCTGAGGCGATCGCCCTTCTCTGATAGACTTTGGGGTG
TTTACAAAAAAACTAAATGA

Product: WD repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MTNLTLLQLCIWLSHKHGDPLDGLRQELLLRALEGYKLKDIQIDGYSHSYVKRVIAPDLWKRLGRYCNQRVGIRSLQLAL
TTKYEQLSEQEKAAVDKIVPNGMAATTESQVPAPTPPQYQGIPRNKNHFYNQESTLRTLGQRLQQRDISLIFVLGGGGLG
KTTLVSEVLRHHPPLQENTLWCNLSDRLMFDHNWALIQQEWALAEHPDGAIAQLQDHLQQQPKILVFDHWELLFATACLS
GNYQPQHVMYVEFLEAIAHQSLAGTVVVISRENSPAIEALATDNPRVTLITVEGLSNLVAQQILQEYNLQDPELWADLVE
TYRGNPLKLRLIATGIQEWYGGSVAQFQNQETIIGGNTLRDILYNLTCRISNSEQEVLYWLMLWGKSITLEQLQANFHVE
MPFASEVWDAVRSLDRRFLLEKKENHRPYFGLQPSIQRYLAQEFTRECCQEIIQAIATLPQTHFNHLKHFPLMPQGADPN
ILTSPVICPILKGLQNRYRDFSQIQANLRRLAQNTPPANSLQHDYRQTNLTLLYETLTTYFL

Sequences:

>Translated_542_residues
MTNLTLLQLCIWLSHKHGDPLDGLRQELLLRALEGYKLKDIQIDGYSHSYVKRVIAPDLWKRLGRYCNQRVGIRSLQLAL
TTKYEQLSEQEKAAVDKIVPNGMAATTESQVPAPTPPQYQGIPRNKNHFYNQESTLRTLGQRLQQRDISLIFVLGGGGLG
KTTLVSEVLRHHPPLQENTLWCNLSDRLMFDHNWALIQQEWALAEHPDGAIAQLQDHLQQQPKILVFDHWELLFATACLS
GNYQPQHVMYVEFLEAIAHQSLAGTVVVISRENSPAIEALATDNPRVTLITVEGLSNLVAQQILQEYNLQDPELWADLVE
TYRGNPLKLRLIATGIQEWYGGSVAQFQNQETIIGGNTLRDILYNLTCRISNSEQEVLYWLMLWGKSITLEQLQANFHVE
MPFASEVWDAVRSLDRRFLLEKKENHRPYFGLQPSIQRYLAQEFTRECCQEIIQAIATLPQTHFNHLKHFPLMPQGADPN
ILTSPVICPILKGLQNRYRDFSQIQANLRRLAQNTPPANSLQHDYRQTNLTLLYETLTTYFL
>Mature_541_residues
TNLTLLQLCIWLSHKHGDPLDGLRQELLLRALEGYKLKDIQIDGYSHSYVKRVIAPDLWKRLGRYCNQRVGIRSLQLALT
TKYEQLSEQEKAAVDKIVPNGMAATTESQVPAPTPPQYQGIPRNKNHFYNQESTLRTLGQRLQQRDISLIFVLGGGGLGK
TTLVSEVLRHHPPLQENTLWCNLSDRLMFDHNWALIQQEWALAEHPDGAIAQLQDHLQQQPKILVFDHWELLFATACLSG
NYQPQHVMYVEFLEAIAHQSLAGTVVVISRENSPAIEALATDNPRVTLITVEGLSNLVAQQILQEYNLQDPELWADLVET
YRGNPLKLRLIATGIQEWYGGSVAQFQNQETIIGGNTLRDILYNLTCRISNSEQEVLYWLMLWGKSITLEQLQANFHVEM
PFASEVWDAVRSLDRRFLLEKKENHRPYFGLQPSIQRYLAQEFTRECCQEIIQAIATLPQTHFNHLKHFPLMPQGADPNI
LTSPVICPILKGLQNRYRDFSQIQANLRRLAQNTPPANSLQHDYRQTNLTLLYETLTTYFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 62157; Mature: 62026

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLTLLQLCIWLSHKHGDPLDGLRQELLLRALEGYKLKDIQIDGYSHSYVKRVIAPDLW
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
KRLGRYCNQRVGIRSLQLALTTKYEQLSEQEKAAVDKIVPNGMAATTESQVPAPTPPQYQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GIPRNKNHFYNQESTLRTLGQRLQQRDISLIFVLGGGGLGKTTLVSEVLRHHPPLQENTL
CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
WCNLSDRLMFDHNWALIQQEWALAEHPDGAIAQLQDHLQQQPKILVFDHWELLFATACLS
EEECCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHC
GNYQPQHVMYVEFLEAIAHQSLAGTVVVISRENSPAIEALATDNPRVTLITVEGLSNLVA
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCHHHHHH
QQILQEYNLQDPELWADLVETYRGNPLKLRLIATGIQEWYGGSVAQFQNQETIIGGNTLR
HHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCHHHHCCCCEEECCHHHH
DILYNLTCRISNSEQEVLYWLMLWGKSITLEQLQANFHVEMPFASEVWDAVRSLDRRFLL
HHHHHHHEEECCCHHHHHHHHHHHCCCCCHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH
EKKENHRPYFGLQPSIQRYLAQEFTRECCQEIIQAIATLPQTHFNHLKHFPLMPQGADPN
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC
ILTSPVICPILKGLQNRYRDFSQIQANLRRLAQNTPPANSLQHDYRQTNLTLLYETLTTY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FL
CC
>Mature Secondary Structure 
TNLTLLQLCIWLSHKHGDPLDGLRQELLLRALEGYKLKDIQIDGYSHSYVKRVIAPDLW
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
KRLGRYCNQRVGIRSLQLALTTKYEQLSEQEKAAVDKIVPNGMAATTESQVPAPTPPQYQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GIPRNKNHFYNQESTLRTLGQRLQQRDISLIFVLGGGGLGKTTLVSEVLRHHPPLQENTL
CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
WCNLSDRLMFDHNWALIQQEWALAEHPDGAIAQLQDHLQQQPKILVFDHWELLFATACLS
EEECCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHC
GNYQPQHVMYVEFLEAIAHQSLAGTVVVISRENSPAIEALATDNPRVTLITVEGLSNLVA
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCHHHHHH
QQILQEYNLQDPELWADLVETYRGNPLKLRLIATGIQEWYGGSVAQFQNQETIIGGNTLR
HHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCHHHHCCCCEEECCHHHH
DILYNLTCRISNSEQEVLYWLMLWGKSITLEQLQANFHVEMPFASEVWDAVRSLDRRFLL
HHHHHHHEEECCCHHHHHHHHHHHCCCCCHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH
EKKENHRPYFGLQPSIQRYLAQEFTRECCQEIIQAIATLPQTHFNHLKHFPLMPQGADPN
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC
ILTSPVICPILKGLQNRYRDFSQIQANLRRLAQNTPPANSLQHDYRQTNLTLLYETLTTY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]