Click here to switch to the map view.

The map label for this gene is lys1

Identifier: 170077904

GI number: 170077904

Start: 1339911

End: 1341041

Strand: Direct

Name: lys1

Synonym: SYNPCC7002_A1289

Alternate gene names: NA

Gene position: 1339911-1341041 (Clockwise)

Preceding gene: 170077900

Following gene: 170077908

Centisome position: 44.54

GC content: 52.34

Gene sequence:

>1131_bases
ATGCCCAGGGTGTGGCAGCCAGAGTACAGGATAGCGCCGATGGTAAGGAAGATTTTGATTTTGGGGGGCACGGGCTGCAT
CGGTCAACGGGTGGCAGCGGCGATCGCCCCCCTGGGTGCGGTGACAGTTACGGGACGTTCTGGGCAGACAGCAAAGGCGC
TCCAGGGAACATTTCTGCGCCTTGATTTAGAAGATTTAGCAGCTTTAGAAAAGGCGATCGCCAACCATGATCTGGTGATT
CACTGTGCGGGGCCATTTCACCGCCGGGATGGGCGAGTCCTACAAACCTGCATCTACCAAGGCAAAAATTACATTGACGT
TAGTGATCACCGTTGCCTGTACCAAAAGCTCAAACCCCTGACCCAAGCCGCCAGGGAAGCCGGAATTATCGCGGTGTGCA
ATGCAGGGGTCTTTCCGGGGATCTCTAACAGTATGGTGCGCCTCGGTGTAGAGCAGCTTGACGAACCTCACCAAATTGAG
CTTTATTATGGTGTCGCAGGTTCCGGCGGGGCTGGAGAAACGGTGCTGACCACGACTTTTCTGGGGTTAGGAGAACCTTT
TCTGGTGTTCCAAGGGGGCACTTGGCAAGCCAAACAACCCTATTCCAAGCCGACGATTATCGATTTTCCGGCACCCATTG
GCAAAACAACGGTGTATTGGTTTGATGTGGCGGAAACTTTTACCTTTGCTGAGTCTTTTCCGGTAGAAACGGTGGTCACA
AAATTTGGTTCTCTGCCCAATTTTTATAATCAGCTGACGCGGGCCATGACCCTATTGCCGGAATCATTACGCCAACATCC
CCGCATCATTCAGGGTCTCAGCAAAATTGGCTACGGTATGACCAAGCTCACGGATTCCTTTACGGGGGTTGGGGTGGCGA
TGCGAGCGATTGTTAGCGGCATAAAAGATGCTACGCCCCAGCAGGTTACGGTGGATTTTGTTCATGAACACACGGCGATC
GCCGCTGGCTTAGGGGTTGCTCTGGTGGCGGAGTTAGTTTTGAGTGAGCAAATTAACCAGCCTGGTCTCTATCCCGTCGA
GCAGATTATTCCCAGTGATTTGTTTTTGGCCTGGGCACGCCAGCATCAACTCCAACTTTCTTGGAACATTCAACCTTCTG
AAAAGAATTAG

Upstream 100 bases:

>100_bases
GCCTAGGGGCAACCTGGCGGGGAAAATTGGATTTTTTAGGCTCAGGCTTGCGGTGGCGTGGTGGGTCGTTGTCTACTGTC
TCAGGGAGCAGCCTGATAAA

Downstream 100 bases:

>100_bases
GCGATCGCCAATTGAACATTCACTAGAAATCTGGTCACTATTTTTAAACTGTCGCTGTTAGGGCCGATTGCTTGAGTTGC
AGGAAGGTCGAAATTTCATG

Product: saccharopine dehydrogenase

Products: NA

Alternate protein names: Saccharopine Dehydrogenase Related Protein

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MPRVWQPEYRIAPMVRKILILGGTGCIGQRVAAAIAPLGAVTVTGRSGQTAKALQGTFLRLDLEDLAALEKAIANHDLVI
HCAGPFHRRDGRVLQTCIYQGKNYIDVSDHRCLYQKLKPLTQAAREAGIIAVCNAGVFPGISNSMVRLGVEQLDEPHQIE
LYYGVAGSGGAGETVLTTTFLGLGEPFLVFQGGTWQAKQPYSKPTIIDFPAPIGKTTVYWFDVAETFTFAESFPVETVVT
KFGSLPNFYNQLTRAMTLLPESLRQHPRIIQGLSKIGYGMTKLTDSFTGVGVAMRAIVSGIKDATPQQVTVDFVHEHTAI
AAGLGVALVAELVLSEQINQPGLYPVEQIIPSDLFLAWARQHQLQLSWNIQPSEKN

Sequences:

>Translated_376_residues
MPRVWQPEYRIAPMVRKILILGGTGCIGQRVAAAIAPLGAVTVTGRSGQTAKALQGTFLRLDLEDLAALEKAIANHDLVI
HCAGPFHRRDGRVLQTCIYQGKNYIDVSDHRCLYQKLKPLTQAAREAGIIAVCNAGVFPGISNSMVRLGVEQLDEPHQIE
LYYGVAGSGGAGETVLTTTFLGLGEPFLVFQGGTWQAKQPYSKPTIIDFPAPIGKTTVYWFDVAETFTFAESFPVETVVT
KFGSLPNFYNQLTRAMTLLPESLRQHPRIIQGLSKIGYGMTKLTDSFTGVGVAMRAIVSGIKDATPQQVTVDFVHEHTAI
AAGLGVALVAELVLSEQINQPGLYPVEQIIPSDLFLAWARQHQLQLSWNIQPSEKN
>Mature_375_residues
PRVWQPEYRIAPMVRKILILGGTGCIGQRVAAAIAPLGAVTVTGRSGQTAKALQGTFLRLDLEDLAALEKAIANHDLVIH
CAGPFHRRDGRVLQTCIYQGKNYIDVSDHRCLYQKLKPLTQAAREAGIIAVCNAGVFPGISNSMVRLGVEQLDEPHQIEL
YYGVAGSGGAGETVLTTTFLGLGEPFLVFQGGTWQAKQPYSKPTIIDFPAPIGKTTVYWFDVAETFTFAESFPVETVVTK
FGSLPNFYNQLTRAMTLLPESLRQHPRIIQGLSKIGYGMTKLTDSFTGVGVAMRAIVSGIKDATPQQVTVDFVHEHTAIA
AGLGVALVAELVLSEQINQPGLYPVEQIIPSDLFLAWARQHQLQLSWNIQPSEKN

Specific function: Unknown

COG id: COG1748

COG function: function code E; Saccharopine dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40984; Mature: 40853

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVWQPEYRIAPMVRKILILGGTGCIGQRVAAAIAPLGAVTVTGRSGQTAKALQGTFLR
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCEEEE
LDLEDLAALEKAIANHDLVIHCAGPFHRRDGRVLQTCIYQGKNYIDVSDHRCLYQKLKPL
EEHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHH
TQAAREAGIIAVCNAGVFPGISNSMVRLGVEQLDEPHQIELYYGVAGSGGAGETVLTTTF
HHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHH
LGLGEPFLVFQGGTWQAKQPYSKPTIIDFPAPIGKTTVYWFDVAETFTFAESFPVETVVT
HHCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHH
KFGSLPNFYNQLTRAMTLLPESLRQHPRIIQGLSKIGYGMTKLTDSFTGVGVAMRAIVSG
HHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IKDATPQQVTVDFVHEHTAIAAGLGVALVAELVLSEQINQPGLYPVEQIIPSDLFLAWAR
HCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHH
QHQLQLSWNIQPSEKN
CCEEEEEEECCCCCCC
>Mature Secondary Structure 
PRVWQPEYRIAPMVRKILILGGTGCIGQRVAAAIAPLGAVTVTGRSGQTAKALQGTFLR
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCEEEE
LDLEDLAALEKAIANHDLVIHCAGPFHRRDGRVLQTCIYQGKNYIDVSDHRCLYQKLKPL
EEHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHH
TQAAREAGIIAVCNAGVFPGISNSMVRLGVEQLDEPHQIELYYGVAGSGGAGETVLTTTF
HHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHH
LGLGEPFLVFQGGTWQAKQPYSKPTIIDFPAPIGKTTVYWFDVAETFTFAESFPVETVVT
HHCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHH
KFGSLPNFYNQLTRAMTLLPESLRQHPRIIQGLSKIGYGMTKLTDSFTGVGVAMRAIVSG
HHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IKDATPQQVTVDFVHEHTAIAAGLGVALVAELVLSEQINQPGLYPVEQIIPSDLFLAWAR
HCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHH
QHQLQLSWNIQPSEKN
CCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA