Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077899

Identifier: 170077899

GI number: 170077899

Start: 1334149

End: 1334589

Strand: Direct

Name: 170077899

Synonym: SYNPCC7002_A1284

Alternate gene names: NA

Gene position: 1334149-1334589 (Clockwise)

Preceding gene: 170077896

Following gene: 170077900

Centisome position: 44.35

GC content: 50.57

Gene sequence:

>441_bases
ATGGCTTACGCTTATCGACGAACCATCCATTTGGCGGATACTGATGCCGCCGGGGTGGTCTACTTTGCCCAGCTTCTCCA
TATTTGCCACGAGGCCTATGAAATATGTCTCATAGGGAACGGTATGGATTGGTCTGGGTTACTCCGGGAGGGAACCGTTG
CCCTGCCCATTGTCCATAGTGCCATCGATTTTTTGCGGCCAATCACCTGGGGCGATCGCCTAGACATTCAGCTTTACCCA
GAACTTGAAAATTCTCGCCAATTTAAGATTTCTTACCGGATTTTTAAGGAAAATCAAGACTCCCCCCCAGAATCGCCCCT
GGCCACAGCCCTTACCCGCCACGTGGCGATCAATCCTAGAACTCGTCAGCGTTGTAGCCTACCTCCGGTAGTCGAAACAT
GGTTAAGGAATGCACCGAAAATCGAGGACAGCAAAATTTAG

Upstream 100 bases:

>100_bases
AAAGTTAAAGAGTTTACTTTGGTAGGGGCCTGGAGCAGACATCGTCATTTTTGCGGCACAACGCTTTTATTGTCCCATAG
AGATTTCGGAATCGAAGTTT

Downstream 100 bases:

>100_bases
CCTGTACAATTGTCTTGAATCTAACGATATCTTTTTACCTGTGATGCTAAAACAAGGTAGCTCACGCACTTAATTCATTA
TTTTTCATTATTTTCAGACT

Product: thioesterase family protein

Products: NA

Alternate protein names: DHNA-CoA hydrolase; DHNA-CoA thioesterase

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHSAIDFLRPITWGDRLDIQLYP
ELENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPRTRQRCSLPPVVETWLRNAPKIEDSKI

Sequences:

>Translated_146_residues
MAYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHSAIDFLRPITWGDRLDIQLYP
ELENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPRTRQRCSLPPVVETWLRNAPKIEDSKI
>Mature_145_residues
AYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHSAIDFLRPITWGDRLDIQLYPE
LENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPRTRQRCSLPPVVETWLRNAPKIEDSKI

Specific function: Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl- CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DNCH_SYNP2 (B1XL26)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734537.1
- ProteinModelPortal:   B1XL26
- SMR:   B1XL26
- GeneID:   6055567
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1284
- HOGENOM:   HBG439376
- OMA:   HEAWEES
- HAMAP:   MF_02101
- InterPro:   IPR022829
- InterPro:   IPR006683

Pfam domain/function: PF03061 4HBT

EC number: =3.1.2.28

Molecular weight: Translated: 16688; Mature: 16557

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: ACT_SITE 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHS
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCCCEEHHHHHH
AIDFLRPITWGDRLDIQLYPELENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPR
HHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHEEECCC
TRQRCSLPPVVETWLRNAPKIEDSKI
CCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHS
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCCCEEHHHHHH
AIDFLRPITWGDRLDIQLYPELENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPR
HHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHEEECCC
TRQRCSLPPVVETWLRNAPKIEDSKI
CCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA