Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077894

Identifier: 170077894

GI number: 170077894

Start: 1326810

End: 1327634

Strand: Reverse

Name: 170077894

Synonym: SYNPCC7002_A1279

Alternate gene names: NA

Gene position: 1327634-1326810 (Counterclockwise)

Preceding gene: 170077897

Following gene: 170077892

Centisome position: 44.14

GC content: 44.12

Gene sequence:

>825_bases
ATGAAAAATTTTGACGCCTTTTTTCAAAAAATTTATGCTCAACCCATCGAAGCACGTCAACATTGGTATGCAGAGGCAAC
CCAGGCCTATGACCAATATCGTGCCCCCTATATGCCGGAAATTATTGATTTAATCTGCGGAAAAATCAAGCCGGAAAGTG
TCATTCTAGAAATTGGCAGCGGCCCAGGCAATGCAACGCAACATTTTGCCCAACGGGGTTTTTCATTAATCTGTCTAGAG
CCGAACCCACGAGCCTGTGAATTTGCCGCCCAACGTTTTCAAAATTACCCAATTCAAATTATTAATACCACCTTTGAGGA
ATGGCAACCGACCCCAGAAAAATTCGATACTATCCTTGCCAGTACTTCTTTTCACTGGCTACAACCAGACACCAGATGCC
AGGCGATCGCCAACTTACTCAAGCCCCAGGGGAACATACTTCTGCTTTGGAATACCGTTCCCCAACCGGATCCCACCATT
TTTCAGGATCTCTTGCCTCTCTATGAAAAATATATGCCCAGCTTTGCCAGCTTTGAAAATATCGCTGTCCAGGAACAAAA
TCTCAAGAACATCAGCCAGGGTTTGCTTGATTCAAATTGTTTTCAAAACTTAGAACTAACCCAGGTCATTGAAACCAAAG
ATTATTCCCCCAACGATTACCTCAAATTACTCACAACTCTTTCTCCCTACATTGCCCTAGATCCCACAGTTCGCAGGCAG
CTCTTTGATGAACTAAAGGCTGTCTTTCAAGCTCGAAAAATTCAGACGATTCCCACCCAATATATTTGCGCTGCCCACAT
TGCCCAAGTGAAACCGCCCAGTTAA

Upstream 100 bases:

>100_bases
TGTAAAAAGGAGGTTGGTTTTTTACTTCCTTAATTTTAATCATCAAGAAAATAACTAATATTAAATAACCGAAAATACTG
TTCTTTTAAGCTTTTAAAAT

Downstream 100 bases:

>100_bases
AAAAAAGGTGAGAATCACTGACTCTCACCTAATCGGTTTAACTTAATATTGTTATTAAATATTAAATCAATCTAATTTCT
CGATTAGCTTTCCTTCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Methyltransferase Domain Family; 3-Demethylubiquinone-9 3-Methyltransferase Protein; LigA Protein; Cyclopropane-Fatty-Acyl-Phospholipid Synthase Superfamily

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKNFDAFFQKIYAQPIEARQHWYAEATQAYDQYRAPYMPEIIDLICGKIKPESVILEIGSGPGNATQHFAQRGFSLICLE
PNPRACEFAAQRFQNYPIQIINTTFEEWQPTPEKFDTILASTSFHWLQPDTRCQAIANLLKPQGNILLLWNTVPQPDPTI
FQDLLPLYEKYMPSFASFENIAVQEQNLKNISQGLLDSNCFQNLELTQVIETKDYSPNDYLKLLTTLSPYIALDPTVRRQ
LFDELKAVFQARKIQTIPTQYICAAHIAQVKPPS

Sequences:

>Translated_274_residues
MKNFDAFFQKIYAQPIEARQHWYAEATQAYDQYRAPYMPEIIDLICGKIKPESVILEIGSGPGNATQHFAQRGFSLICLE
PNPRACEFAAQRFQNYPIQIINTTFEEWQPTPEKFDTILASTSFHWLQPDTRCQAIANLLKPQGNILLLWNTVPQPDPTI
FQDLLPLYEKYMPSFASFENIAVQEQNLKNISQGLLDSNCFQNLELTQVIETKDYSPNDYLKLLTTLSPYIALDPTVRRQ
LFDELKAVFQARKIQTIPTQYICAAHIAQVKPPS
>Mature_274_residues
MKNFDAFFQKIYAQPIEARQHWYAEATQAYDQYRAPYMPEIIDLICGKIKPESVILEIGSGPGNATQHFAQRGFSLICLE
PNPRACEFAAQRFQNYPIQIINTTFEEWQPTPEKFDTILASTSFHWLQPDTRCQAIANLLKPQGNILLLWNTVPQPDPTI
FQDLLPLYEKYMPSFASFENIAVQEQNLKNISQGLLDSNCFQNLELTQVIETKDYSPNDYLKLLTTLSPYIALDPTVRRQ
LFDELKAVFQARKIQTIPTQYICAAHIAQVKPPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31468; Mature: 31468

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFDAFFQKIYAQPIEARQHWYAEATQAYDQYRAPYMPEIIDLICGKIKPESVILEIGS
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEECC
GPGNATQHFAQRGFSLICLEPNPRACEFAAQRFQNYPIQIINTTFEEWQPTPEKFDTILA
CCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHCCCCHHHHHHHHH
STSFHWLQPDTRCQAIANLLKPQGNILLLWNTVPQPDPTIFQDLLPLYEKYMPSFASFEN
HCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
IAVQEQNLKNISQGLLDSNCFQNLELTQVIETKDYSPNDYLKLLTTLSPYIALDPTVRRQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEECHHHHHH
LFDELKAVFQARKIQTIPTQYICAAHIAQVKPPS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNFDAFFQKIYAQPIEARQHWYAEATQAYDQYRAPYMPEIIDLICGKIKPESVILEIGS
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEECC
GPGNATQHFAQRGFSLICLEPNPRACEFAAQRFQNYPIQIINTTFEEWQPTPEKFDTILA
CCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHCCCCHHHHHHHHH
STSFHWLQPDTRCQAIANLLKPQGNILLLWNTVPQPDPTIFQDLLPLYEKYMPSFASFEN
HCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
IAVQEQNLKNISQGLLDSNCFQNLELTQVIETKDYSPNDYLKLLTTLSPYIALDPTVRRQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEECHHHHHH
LFDELKAVFQARKIQTIPTQYICAAHIAQVKPPS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA